OPUNC05G24550 (Oryza punctata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OPUNC05G24550 T194495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.848 0.917
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.848 0.917
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.807 0.861
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.807 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC05G24550.1 GATA 149 184

Links

Other GATA family TFs
Other Oryza punctata TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N
OCP3 Arabidopsis thaliana AT5G11270 N
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N
Bo9g171420 Brassica oleracea Bo9g171420 N
Bra008975 Brassica rapa Bra008975 N
PK00680.1 Cannabis sativa PK00680.1 N
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N
Carubv10002492m.g Capsella rubella Carubv10002492m.g N
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N
Cla021272 Citrullus lanatus Cla021272 N
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N
Cucsa.310460 Cucumis sativus Cucsa.310460 N
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N
GLYMA04G07230 Glycine max GLYMA04G07230 N
GLYMA06G07330 Glycine max GLYMA06G07330 N
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N
Lus10002899.g Linum usitatissimum Lus10002899.g N
Lus10002029.g Linum usitatissimum Lus10002029.g N
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N
MDP0000119866 Malus domestica MDP0000119866 N
MDP0000202143 Malus domestica MDP0000202143 N
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N
OB06G27850 Oryza brachyantha OB06G27850 N
Pm004594 Prunus mume Pm004594 N
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N
29848.m004652 Ricinus communis 29848.m004652 N
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N
TCM_038389 Theobroma cacao TCM_038389 N
OCP3 Vitis vinifera VIT_04s0008g05190 N