OMERI10G05450 (Oryza meridionalis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 OMERI10G05450 T200813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI10G05450.1 GRAS 236 550
OMERI10G05450.2 GRAS 146 310
OMERI10G05450.2 GRAS 307 453
OMERI10G05450.3 GRAS 264 634
OMERI10G05450.4 GRAS 146 516
OMERI10G05450.5 GRAS 191 561

Links

Other GRAS family TFs
Other Oryza meridionalis TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08653 Aegilops tauschii F775_08653 N 0.818
F775_26780 Aegilops tauschii F775_26780 N 0.875
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.710
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.728
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.718
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.898
Bo9g009240 Brassica oleracea Bo9g009240 N 0.700
PK09018.1 Cannabis sativa PK09018.1 N 0.709
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.715
Ca_09786 Cicer arietinum Ca_09786 N 0.705
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.710
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.706
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.713
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.703
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.710
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.716
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.716
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.722
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.721
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.805
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.872
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.949
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.856
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.722
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.711
MDP0000804652 Malus domestica MDP0000804652 N 0.710
MDP0000152670 Malus domestica MDP0000152670 N 0.713
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.709
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.716
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.709
OBART10G07700 Oryza barthii OBART10G07700 N 0.995
OBART03G06740 Oryza barthii OBART03G06740 N 0.853
OB10G15940 Oryza brachyantha OB10G15940 N 0.943
OB03G16920 Oryza brachyantha OB03G16920 N 0.847
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.853
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.995
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.995
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.845
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.992
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.845
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.989
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.842
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.989
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.845
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.976
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.995
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.845
CIGR2 Oryza sativa OS07G0583600 N 0.704
OS03G0193000 Oryza sativa OS03G0193000 N 0.845
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.885
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.875
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.830
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.827
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.713
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.716
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.713
Pm012019 Prunus mume Pm012019 N 0.702
Pm015021 Prunus mume Pm015021 N 0.724
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.726
29949.m000124 Ricinus communis 29949.m000124 N 0.701
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.722
Si029418m.g Setaria italica Si029418m.g N 0.705
Si035052m.g Setaria italica Si035052m.g N 0.885
Si035089m.g Setaria italica Si035089m.g N 0.824
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.719
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.706
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.718
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.705
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.805
TCM_002319 Theobroma cacao TCM_002319 N 0.721
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.875
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.832
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.818
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.814
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.818
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.837
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.885
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.875
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.856
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.879
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.815
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.831
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.709
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.719
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.706
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.810
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.702
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.875
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.810