CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa002472mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa002472mg
T201266_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ12525
GRAS
295
667
LSTLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDANQRLAHYFADGLEARLAGARTPSYSFLVSMQISAAEILKAYEVFVTSSPFKTVSHFLANKTILKLAEKATRLHVIDFGISYGFQWPCFIQHLSKRPGGPPKLRITAIELPQPGFRPTERVEETGRRLKKYAERFNVPFEYNVIAQKWETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPNLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPREDERRLMFEKYVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPVDQELLKKMKRILKFMGYHNDFRIDEDGHWILQGWKGRTILALSFWK
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.713
gene30178-v1.0-hybrid
Fragaria vesca
gene30178-v1.0-hybrid
N
0.728
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.703
MDP0000851230
Malus domestica
MDP0000851230
N
0.784
MDP0000796348
Malus domestica
MDP0000796348
N
0.803
MDP0000289783
Malus domestica
MDP0000289783
N
0.768
MDP0000287041
Malus domestica
MDP0000287041
N
0.784
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.708
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.703
Pm000713
Prunus mume
Pm000713
N
0.819
Pm000714
Prunus mume
Pm000714
N
0.735
Pm000716
Prunus mume
Pm000716
N
0.959
Pm000717
Prunus mume
Pm000717
N
0.919
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.924
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.943
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.970
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.727
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.738
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.789
28650.m000187
Ricinus communis
28650.m000187
N
0.700
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.745
TCM_041810
Theobroma cacao
TCM_041810
N
0.700
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750