CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSFALG00000010915 *(Ficedula albicollis)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSFALG00000010915	T209575_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TLX3 M05233_2.00	Homo sapiens	NAATKGNNNNNNNNNNNNNCAATTN	NAATTGNNNNNNNNNNNNNCMATTN	SELEX Yin et al.(2017) TLX3_eDBD_HT-SELEX	0.855	0.965
TLX3 M05235_2.00	Homo sapiens	NAATTGNNNNNHNNNNCAATTN	NAATTGNNNNDNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_FL_HT-SELEX	0.855	0.965
TLX3 M05234_2.00	Homo sapiens	NAATTGNNNNNNNNNNDCAATTD	HAATTGHNNNNNNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_eDBD_Methyl-HT-SELEX	0.855	0.965
TLX3 M05236_2.00	Homo sapiens	HAATTRNNNNNNNNNYHATTV	BAATDRNNNNNNNNNYAATTD	SELEX Yin et al.(2017) TLX3_FL_Methyl-HT-SELEX	0.855	0.965
TLX2 M02087_2.00	Homo sapiens	NYRDNNNNNN	NNNNNNHYRN	PBM Weirauch et al.(2014) pTH6482	0.817	0.877
Tlx2 M00526_2.00	Mus musculus	WTTAAWTA	TAWTTAAW	PBM Berger et al.(2008) Tlx2_3498	0.817	0.877
TLX2 M05020_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) TLX2_eDBD_HT-SELEX	0.817	0.877
TLX2 M10672_2.00	Homo sapiens	BNGTAAKDNB	VNHMTTACNV	Transfac Matys et al.(2006) V$NCX_01	0.817	0.877
TLX2 M05021_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) TLX2_eDBD_Methyl-HT-SELEX	0.817	0.877
C15 M06505_2.00	Drosophila melanogaster	TTAAWKR	YMWTTAA	B1H Mathelier et al.(2014) MA0170.1	0.804	0.860
C15 M06289_2.00	Drosophila melanogaster	BTTAAWKR	YMWTTAAV	B1H Zhu et al.(2011) C15_Cell_FBgn0004863	0.804	0.860
C15 M06290_2.00	Drosophila melanogaster	NWTAAWKR	YMWTTAWN	B1H Zhu et al.(2011) C15_SOLEXA_FBgn0004863	0.804	0.860
lms M03863_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) CG13424_1	0.733	0.596
lms M03864_2.00	Drosophila melanogaster	HTWATTRDWTDATTRR	YYAATHAWHYAATWAD	SELEX Nitta et al.(2015) lms_1	0.733	0.596
lms M06536_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0175.1	0.733	0.596
lms M06347_2.00	Drosophila melanogaster	NYTAATKR	YMATTARN	B1H Zhu et al.(2011) CG13424_Cell_FBgn0034520	0.733	0.596
lms M06348_2.00	Drosophila melanogaster	NNHTAATDRN	NYHATTADNN	B1H Zhu et al.(2011) CG13424_SOLEXA_2_FBgn0034520	0.733	0.596
lms M06349_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) CG13424_SOLEXA_FBgn0034520	0.733	0.596
NK7.1 M03847_2.00	Drosophila melanogaster	VTTAAAYGDTD	HAHCRTTTAAB	SELEX Nitta et al.(2015) NK7.1_1	0.726	0.579
NK7.1 M03848_2.00	Drosophila melanogaster	NSTTAATTGVY	RBCAATTAASN	SELEX Nitta et al.(2015) NK7.1_2	0.726	0.579
NK7.1 M06524_2.00	Drosophila melanogaster	TTAATDR	YHATTAA	B1H Mathelier et al.(2014) MA0196.1	0.726	0.579
NK7.1 M06323_2.00	Drosophila melanogaster	NTTAATDR	YHATTAAN	B1H Zhu et al.(2011) NK7.1_Cell_FBgn0024321	0.726	0.579
NK7.1 M06324_2.00	Drosophila melanogaster	YTAATDR	YHATTAR	B1H Zhu et al.(2011) NK7.1_SOLEXA_FBgn0024321	0.726	0.579
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.716	0.596
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.716	0.596
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.716	0.596
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.716	0.596
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.716	0.596
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.716	0.596
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.716	0.596
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.716	0.596
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.716	0.596
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.716	0.596
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.716	0.596
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.716	0.596
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.716	0.596
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.716	0.596
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.704	0.579
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.704	0.579
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.704	0.579
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.704	0.561
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.704	0.561
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.704	0.561
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.704	0.561
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.704	0.561
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.704	0.561
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.704	0.561
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.704	0.561
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.704	0.561
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.704	0.561
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.661	0.491
Hmx2 M00507_2.00	Mus musculus	NHRANYGNNN	NNNCRNTYDN	PBM Berger et al.(2008) Hmx2_3424	0.658	0.596
HMX2 M03234_2.00	Homo sapiens	NNTTAAKTGNN	NNCAMTTAANN	SELEX Jolma et al.(2013) HMX2_1	0.658	0.596
HMX2 M05373_2.00	Homo sapiens	GNHRAKYGS	SCRMTYDNC	SELEX Yin et al.(2017) HMX2_eDBD_HT-SELEX	0.658	0.596
HMX2 M05375_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_HT-SELEX	0.658	0.596
HMX2 M05374_2.00	Homo sapiens	NNTAAKTGN	NCAMTTANN	SELEX Yin et al.(2017) HMX2_eDBD_Methyl-HT-SELEX	0.658	0.596
HMX2 M05376_2.00	Homo sapiens	NTTAAKTGNN	NNCAMTTAAN	SELEX Yin et al.(2017) HMX2_FL_Methyl-HT-SELEX	0.658	0.596
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.654	0.509
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.654	0.509
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.654	0.509
E5 M03814_2.00	Drosophila melanogaster	STAATKNN	NNMATTAS	SELEX Nitta et al.(2015) E5_1	0.654	0.509
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.654	0.509
E5 M06507_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0189.1	0.654	0.509
E5 M06293_2.00	Drosophila melanogaster	NBTAATKA	TMATTAVN	B1H Zhu et al.(2011) E5_Cell_FBgn0008646	0.654	0.509
E5 M06294_2.00	Drosophila melanogaster	NTAATDR	YHATTAN	B1H Zhu et al.(2011) E5_SOLEXA_FBgn0008646	0.654	0.509
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.654	0.509
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.654	0.491
ems M02114_2.00	Drosophila melanogaster	NTAATKRNB	VNYMATTAN	PBM Weirauch et al.(2014) pTH5673	0.654	0.491
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.654	0.491
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.654	0.491
ems M03789_2.00	Drosophila melanogaster	BTAATTAN	NTAATTAV	SELEX Nitta et al.(2015) ems_1	0.654	0.491
ems M03790_2.00	Drosophila melanogaster	BTAATTAVBVBTAATKRN	NYMATTAVBVBTAATTAV	SELEX Nitta et al.(2015) ems_2	0.654	0.491
ems M03791_2.00	Drosophila melanogaster	BTAATKRN	NYMATTAV	SELEX Nitta et al.(2015) ems_3	0.654	0.491
ems M03792_2.00	Drosophila melanogaster	STAATKRSSSSTAATKRV	BYMATTASSSSYMATTAS	SELEX Nitta et al.(2015) ems_4	0.654	0.491
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.654	0.491
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.654	0.491
ems M06484_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Mathelier et al.(2014) MA0219.1	0.654	0.491
ems M06233_2.00	Drosophila melanogaster	WHTAATKR	YMATTADW	B1H Zhu et al.(2011) Ems_Cell_FBgn0000576	0.654	0.491
ems M06234_2.00	Drosophila melanogaster	TSTMATHM	KDATKASA	B1H Zhu et al.(2011) ems_FlyReg_FBgn0000576	0.654	0.491
ems M06235_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Ems_SOLEXA_FBgn0000576	0.654	0.491
ems M09676_2.00	Drosophila melanogaster	WTWATGA	TCATWAW	Misc Kulakovskiy et al.(2009) ems	0.654	0.491
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.654	0.491
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.654	0.491
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.649	0.474
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.649	0.474
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.649	0.474
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.649	0.474
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.649	0.474
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.649	0.474
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.649	0.474
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.643	0.456
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.642	0.491
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.642	0.491
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.642	0.491
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.642	0.491
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.642	0.491
Hmx1 M00524_2.00	Mus musculus	NHDAKYRNNN	NNNYRMTHDN	PBM Berger et al.(2008) Hmx1_3423	0.641	0.596
HMX1 M03243_2.00	Homo sapiens	NNTTAAKTGNY	RNCAMTTAANN	SELEX Jolma et al.(2013) HMX1_1	0.641	0.596
HMX1 M05392_2.00	Homo sapiens	BNYAAKTGN	NCAMTTRNV	SELEX Yin et al.(2017) HMX1_eDBD_HT-SELEX	0.641	0.596
HMX1 M05393_2.00	Homo sapiens	VNYAAKTGB	VCAMTTRNB	SELEX Yin et al.(2017) HMX1_eDBD_Methyl-HT-SELEX	0.641	0.596
HMX3 M03233_2.00	Homo sapiens	NNNTAAKTGNN	NNCAMTTANNN	SELEX Jolma et al.(2013) HMX3_1	0.641	0.579
Hmx M03882_2.00	Drosophila melanogaster	NYRAKYGN	NCRMTYRN	SELEX Nitta et al.(2015) Hmx_1	0.641	0.579
Hmx M06554_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Mathelier et al.(2014) MA0192.1	0.641	0.579
Hmx M06386_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_Cell_FBgn0085448	0.641	0.579
Hmx M06387_2.00	Drosophila melanogaster	TTAATTG	CAATTAA	B1H Zhu et al.(2011) Hmx_SOLEXA_FBgn0085448	0.641	0.579
HMX3 M10754_2.00	Homo sapiens	CAAGTGCGTG	CACGCACTTG	Transfac Matys et al.(2006) V$HMX1_01	0.641	0.579
Q24780_9CNID M02205_2.00	Eleutheria dichotoma	NNYTAATTAMN	NKTAATTARNN	PBM Weirauch et al.(2014) pTH6308	0.639	0.509
MEOX2 M03103_2.00	Homo sapiens	NNTRATKASN	NSTMATYANN	SELEX Jolma et al.(2013) MEOX2_1	0.636	0.491
MEOX2 M03104_2.00	Homo sapiens	NTAATTANVNTAATTAV	BTAATTANBNTAATTAN	SELEX Jolma et al.(2013) MEOX2_2	0.636	0.491
MEOX2 M03105_2.00	Homo sapiens	HTAATGATGATKAN	NTMATCATCATTAD	SELEX Jolma et al.(2013) MEOX2_3	0.636	0.491
Meox2 M03271_2.00	Mus musculus	NTAATKAN	NTMATTAN	SELEX Jolma et al.(2013) Meox2_1	0.636	0.491
MEOX2 M04988_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_1	0.636	0.491
MEOX2 M04989_2.00	Homo sapiens	NTVATBRV	BYVATBAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_2	0.636	0.491
Meox2 M10771_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MEOX2_05	0.636	0.491
MEOX2 M04990_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_1	0.636	0.491
MEOX2 M04991_2.00	Homo sapiens	NTVATKRN	NYMATBAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_2	0.636	0.491
NEMVEDRAFT_v1g164989 M02148_2.00	Nematostella vectensis	YTAATTAG	CTAATTAR	PBM Weirauch et al.(2014) pTH5994	0.629	0.561
Hmx3_CONSTRUCT M00537_2.00	PBM CONSTRUCTS	NHDADYRNN	NNYRHTHDN	PBM Berger et al.(2008) Hmx3_3490	0.627	0.561
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.617	0.474
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.617	0.474
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.617	0.474
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.617	0.474
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.617	0.474
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.617	0.474
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.617	0.474
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.617	0.474
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.617	0.474
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.617	0.474
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.617	0.474
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.617	0.474
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.617	0.474
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.617	0.474
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.617	0.474
Q70HR3_PLEPI M02210_2.00	Pleurobrachia pileus	NVVTACTWRD	HYWAGTABBN	PBM Weirauch et al.(2014) pTH6529	0.613	0.561
Evx2 M00393_2.00	Mus musculus	NNTAAYNN	NNRTTANN	PBM Berger et al.(2008) Evx2_2645	0.612	0.456
Evx1 M00395_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Evx1_3952	0.612	0.456
EVX1 M03102_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX1_1	0.612	0.456
EVX2 M03215_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX2_1	0.612	0.456
EVX1 M04985_2.00	Homo sapiens	VTAATKAB	VTMATTAB	SELEX Yin et al.(2017) EVX1_eDBD_HT-SELEX	0.612	0.456
EVX2 M05295_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_HT-SELEX	0.612	0.456
EVX2 M09158_2.00	Homo sapiens	NBTTTATKRCHNN	NNDGYMATAAAVN	Misc Kulakovskiy et al.(2013) EVX2_HUMAN.H11MO.0.A	0.612	0.456
Evx1 M09174_2.00	Mus musculus	WGATTTATDRBHN	NDVYHATAAATCW	Misc Kulakovskiy et al.(2013) EVX1_MOUSE.H11MO.0.C	0.612	0.456
Evx2 M09173_2.00	Mus musculus	BTTTATKRCHBN	NVDGYMATAAAV	Misc Kulakovskiy et al.(2013) EVX2_MOUSE.H11MO.0.A	0.612	0.456
EVX2 M10736_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EVX2_04	0.612	0.456
EVX1 M04986_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_1	0.612	0.456
EVX1 M04987_2.00	Homo sapiens	HTWAYGAB	VTCRTWAD	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_2	0.612	0.456
EVX2 M05296_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_1	0.612	0.456
EVX2 M05297_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_2	0.612	0.456
ventx1.1.L M02234_2.00	Xenopus laevis	NNNNVBNNNN	NNNNVBNNNN	PBM Weirauch et al.(2014) pTH6162	0.610	0.491
ventx1.2.S M10805_2.00	Xenopus laevis	RSRMAAATWBBVS	SBBBWATTTKYSY	Transfac Matys et al.(2006) V$XVENT1_01	0.610	0.491
LBX1 M02090_2.00	Homo sapiens	NTAAYTRG	CYARTTAN	PBM Weirauch et al.(2014) pTH6404	0.609	0.579
lbl M00561_2.00	Drosophila melanogaster	NTAAYDRGN	NCYHRTTAN	PBM Busser et al.(2012a) Lbl	0.609	0.561
lbe M03822_2.00	Drosophila melanogaster	TAACRABV	BVTYGTTA	SELEX Nitta et al.(2015) lbe_1	0.609	0.561
lbe M03823_2.00	Drosophila melanogaster	BTVAKBRV	BYVMTBAV	SELEX Nitta et al.(2015) lbe_2	0.609	0.561
lbe M03824_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) lbe_3	0.609	0.561
lbe M03825_2.00	Drosophila melanogaster	TAAYRAKN	NMTYRTTA	SELEX Nitta et al.(2015) lbe_4	0.609	0.561
lbl M03815_2.00	Drosophila melanogaster	NTAAYKRG	CYMRTTAN	SELEX Nitta et al.(2015) lbl_1	0.609	0.561
lbl M03816_2.00	Drosophila melanogaster	NTAAYRAGN	NCTYRTTAN	SELEX Nitta et al.(2015) lbl_2	0.609	0.561
lbl M06508_2.00	Drosophila melanogaster	TAATKR	YMATTA	B1H Mathelier et al.(2014) MA0232.1	0.609	0.561
lbe M06510_2.00	Drosophila melanogaster	TAAYNA	TNRTTA	B1H Mathelier et al.(2014) MA0231.1	0.609	0.561
lbe M06299_2.00	Drosophila melanogaster	NHTAAYNA	TNRTTADN	B1H Zhu et al.(2011) Lbe_Cell_FBgn0011278	0.609	0.561
lbe M06300_2.00	Drosophila melanogaster	YTAAYBA	TVRTTAR	B1H Zhu et al.(2011) Lbe_SOLEXA_FBgn0011278	0.609	0.561
lbl M06295_2.00	Drosophila melanogaster	VHTAATKR	YMATTADB	B1H Zhu et al.(2011) Lbl_Cell_FBgn0008651	0.609	0.561
lbl M06296_2.00	Drosophila melanogaster	NHTAAYBA	TVRTTADN	B1H Zhu et al.(2011) Lbl_SOLEXA_FBgn0008651	0.609	0.561
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSFALP00000011395	Homeodomain	142	198	KKPRTSFSRVQICELEKRFHRQKYLASAERATLAKALKMTDAQVKTWFQNRRTKWRR

Links
Other Homeodomain family TFs
Other *Ficedula albicollis* TFs

2262 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
F775_03178	Aegilops tauschii	F775_03178	N	0.000
F775_00225	Aegilops tauschii	F775_00225	I	0.000
AMTR_s00057p00091350	Amborella trichopoda	AMTR_s00057p00091350	I	0.000
AMTR_s00021p00218190	Amborella trichopoda	AMTR_s00021p00218190	N	0.000
scaffold_103100001.1	Arabidopsis lyrata	scaffold_103100001.1	I	0.000
fgenesh1_pg.C_scaffold_2000886	Arabidopsis lyrata	fgenesh1_pg.C_scaffold_2000886	I	0.000
fgenesh1_pg.C_scaffold_2001738	Arabidopsis lyrata	fgenesh1_pg.C_scaffold_2001738	I	0.000
fgenesh1_pg.C_scaffold_8002648	Arabidopsis lyrata	fgenesh1_pg.C_scaffold_8002648	I	0.000
fgenesh2_kg.1__2057__AT1G18790.1	Arabidopsis lyrata	fgenesh2_kg.1__2057__AT1G18790.1	I	0.000
RKD2	Arabidopsis thaliana	AT1G74480	D	0.000
RKD1	Arabidopsis thaliana	AT1G18790	I	0.000
Bostr.3288s0094	Boechera stricta	Bostr.3288s0094	I	0.000
BRADI1G45170	Brachypodium distachyon	BRADI1G45170	N	0.000
BRADI2G40920	Brachypodium distachyon	BRADI2G40920	N	0.000
BRADI3G59410	Brachypodium distachyon	BRADI3G59410	N	0.000
Cagra.0402s0077	Capsella grandiflora	Cagra.0402s0077	I	0.000
Carubv10021541m.g	Capsella rubella	Carubv10021541m.g	I	0.000
evm.TU.supercontig_423.7	Carica papaya	evm.TU.supercontig_423.7	I	0.000
Ca_13151	Cicer arietinum	Ca_13151	I	0.000
Cla019404	Citrullus lanatus	Cla019404	I	0.000
orange1.1g036926m.g	Citrus sinensis	orange1.1g036926m.g	I	0.000
Thhalv10019554m.g	Eutrema salsugineum	Thhalv10019554m.g	I	0.000
gene26015-v1.0-hybrid	Fragaria vesca	gene26015-v1.0-hybrid	I	0.000
GLYMA05G01030	Glycine max	GLYMA05G01030	I	0.000
GLYMA04G33516	Glycine max	GLYMA04G33516	I	0.000
GLYMA06G20881	Glycine max	GLYMA06G20881	I	0.000
Gorai.008G193400	Gossypium raimondii	Gorai.008G193400	I	0.000
Gorai.006G266900	Gossypium raimondii	Gorai.006G266900	I	0.000
MLOC_12609	Hordeum vulgare	MLOC_12609	I	0.000
MLOC_59560	Hordeum vulgare	MLOC_59560	I	0.000
LPERR06G07570	Leersia perrieri	LPERR06G07570	I	0.000
LPERR02G26470	Leersia perrieri	LPERR02G26470	N	0.000
LPERR01G16660	Leersia perrieri	LPERR01G16660	N	0.000
Lus10035008.g	Linum usitatissimum	Lus10035008.g	I	0.000
Lus10034456.g	Linum usitatissimum	Lus10034456.g	I	0.000
chr4.CM0087.990.nc	Lotus japonicus	chr4.CM0087.990.nc	I	0.000
MDP0000261199	Malus domestica	MDP0000261199	I	0.000
MDP0000266172	Malus domestica	MDP0000266172	I	0.000
cassava35166.m1	Manihot esculenta	cassava35166.m1	I	0.000
MTR_3g435550	Medicago truncatula	MTR_3g435550	I	0.000
mg020279m	Mimulus guttatus	mg020279m	I	0.000
mgf022310m	Mimulus guttatus	mgf022310m	I	0.000
GSMUA_AchrUn_randomG11290_001	Musa acuminata	GSMUA_AchrUn_randomG11290_001	N	0.000
OBART02G32320	Oryza barthii	OBART02G32320	I	0.000
OBART01G19230	Oryza barthii	OBART01G19230	N	0.000
OB06G17750	Oryza brachyantha	OB06G17750	I	0.000
OB02G39310	Oryza brachyantha	OB02G39310	I	0.000
ORGLA06G0077700	Oryza glaberrima	ORGLA06G0077700	I	0.000
ORGLA02G0278600	Oryza glaberrima	ORGLA02G0278600	I	0.000
OGLUM02G32960	Oryza glumaepatula	OGLUM02G32960	I	0.000
OGLUM01G22860	Oryza glumaepatula	OGLUM01G22860	N	0.000
BGIOSGA005630	Oryza indica	BGIOSGA005630	I	0.000
BGIOSGA001434	Oryza indica	BGIOSGA001434	N	0.000
BGIOSGA022580	Oryza indica	BGIOSGA022580	I	0.000
OLONG_016325	Oryza longistaminata	OLONG_016325	I	0.000
OMERI02G30990	Oryza meridionalis	OMERI02G30990	I	0.000
OMERI06G09770	Oryza meridionalis	OMERI06G09770	I	0.000
ONIVA01G21910	Oryza nivara	ONIVA01G21910	N	0.000
ONIVA06G09450	Oryza nivara	ONIVA06G09450	I	0.000
ONIVA06G04700	Oryza nivara	ONIVA06G04700	I	0.000
OPUNC06G07940	Oryza punctata	OPUNC06G07940	I	0.000
OPUNC02G29870	Oryza punctata	OPUNC02G29870	I	0.000
OPUNC01G19590	Oryza punctata	OPUNC01G19590	N	0.000
ORUFI06G08510	Oryza rufipogon	ORUFI06G08510	I	0.000
ORUFI02G34010	Oryza rufipogon	ORUFI02G34010	I	0.000
ORUFI01G21630	Oryza rufipogon	ORUFI01G21630	N	0.000
OS06G0228950	Oryza sativa	OS06G0228950	I	0.000
Pavir.Aa00708	Panicum virgatum	Pavir.Aa00708	I	0.000
Pavir.Ab02992	Panicum virgatum	Pavir.Ab02992	I	0.000
Pavir.Da01160	Panicum virgatum	Pavir.Da01160	I	0.000
Pavir.Ea01492	Panicum virgatum	Pavir.Ea01492	N	0.000
Pavir.Eb01347	Panicum virgatum	Pavir.Eb01347	N	0.000
Pavir.J13146	Panicum virgatum	Pavir.J13146	I	0.000
Pavir.J14787	Panicum virgatum	Pavir.J14787	N	0.000
Pavir.J17077	Panicum virgatum	Pavir.J17077	N	0.000
PDK_20s1383532g001	Phoenix dactylifera	PDK_20s1383532g001	I	0.000
fgenesh1_pg.scaffold_823000001	Physcomitrella patens	fgenesh1_pg.scaffold_823000001	N	0.000
Pm024905	Prunus mume	Pm024905	I	0.000
PRUPE_ppa023107mg	Prunus persica	PRUPE_ppa023107mg	I	0.000
30138.m004071	Ricinus communis	30138.m004071	I	0.000
SELMODRAFT_73109	Selaginella moellendorffii	SELMODRAFT_73109	N	0.000
SELMODRAFT_73110	Selaginella moellendorffii	SELMODRAFT_73110	N	0.000
SELMODRAFT_73113	Selaginella moellendorffii	SELMODRAFT_73113	N	0.000
Si019159m.g	Setaria italica	Si019159m.g	N	0.000
Si005102m.g	Setaria italica	Si005102m.g	N	0.000
Si008273m.g	Setaria italica	Si008273m.g	I	0.000
Si020172m.g	Setaria italica	Si020172m.g	I	0.000
Sb10g008120	Sorghum bicolor	Sb10g008120	I	0.000
Sb04g028040	Sorghum bicolor	Sb04g028040	N	0.000
TCM_014009	Theobroma cacao	TCM_014009	I	0.000
Traes_6BL_301505440	Triticum aestivum	Traes_6BL_301505440	I	0.000
Traes_6DL_8ECBBC867	Triticum aestivum	Traes_6DL_8ECBBC867	I	0.000
Traes_7DS_405F08A53	Triticum aestivum	Traes_7DS_405F08A53	I	0.000
TRIUR3_19503	Triticum urartu	TRIUR3_19503	I	0.000
VIT_17s0000g06250	Vitis vinifera	VIT_17s0000g06250	I	0.000
GRMZM2G392306	Zea mays	GRMZM2G392306	I	0.000

ENSFALG00000010915 (Ficedula albicollis) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2262 Related TFs

ENSFALG00000010915 **(Ficedula albicollis)
Homeodomain**