GLYMA08G41330 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA08G41330 T218807_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.780 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G41330.1 Homeodomain 19 75
GLYMA08G41330.2 Homeodomain 4 60
GLYMA08G41330.3 Homeodomain 19 75
GLYMA08G41330.4 Homeodomain 4 60

Links

Other Homeodomain family TFs
Other Glycine max TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I 0.616
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.616
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.754
Bo9g006450 Brassica oleracea Bo9g006450 I 0.611
Bra034196 Brassica rapa Bra034196 I 0.611
PK25011.1 Cannabis sativa PK25011.1 D 0.780
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.616
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.616
Ca_21400 Cicer arietinum Ca_21400 I 0.639
Cla008712 Citrullus lanatus Cla008712 I 0.687
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.676
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.676
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.697
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.734
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.618
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.700
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.700
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.700
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.867
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.600
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.633
MDP0000207866 Malus domestica MDP0000207866 I 0.687
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.632
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.666
mgf007720m Mimulus guttatus mgf007720m I 0.636
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.675
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.682
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.628
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.808