CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001875501
(
Schistosoma margrebowiei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SMRZ_0001875501
T236106_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001875501-mRNA-1
Homeodomain
568
624
KRSRTRLSESQLNILRSYFDINNSPTDEKIYEICNKTGLQEKVVKHWFRNTLFKERQ
SMRZ_0001875501-mRNA-1
Homeodomain
1026
1082
RRNRTSITALQSRCMHSIYNYHKTPSVHECDRLGEMIGLSRRVVQVWFQNQRAKEKK
Links
Other
Homeodomain
family TFs
Other
Schistosoma margrebowiei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_28711
Aegilops tauschii
F775_28711
I
F775_32479
Aegilops tauschii
F775_32479
I
AMTR_s00040p00057740
Amborella trichopoda
AMTR_s00040p00057740
I
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
AMTR_s00132p00065700
Amborella trichopoda
AMTR_s00132p00065700
I
Aquca_007_00660
Aquilegia coerulea
Aquca_007_00660
I
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
ABF2
Arabidopsis lyrata
fgenesh2_kg.1__3804__AT1G45249.1
I
ABF1
Arabidopsis lyrata
fgenesh2_kg.1__4055__AT1G49720.1
I
ABF4
Arabidopsis lyrata
fgenesh2_kg.3__2145__AT3G19290.1
I
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
ABF3
Arabidopsis lyrata
fgenesh2_kg.7__705__AT4G34000.1
I
ABF2
Arabidopsis thaliana
AT1G45249
D
ABF1
Arabidopsis thaliana
AT1G49720
D
ABI5
Arabidopsis thaliana
AT2G36270
D
EEL
Arabidopsis thaliana
AT2G41070
I
ABF4
Arabidopsis thaliana
AT3G19290
D
ABF3
Arabidopsis thaliana
AT4G34000
D
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
Bostr.19424s0732
Boechera stricta
Bostr.19424s0732
I
Bostr.7867s1253
Boechera stricta
Bostr.7867s1253
I
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
BRADI3G38200
Brachypodium distachyon
BRADI3G38200
I
Bo1g007700
Brassica oleracea
Bo1g007700
I
Bo1g114840
Brassica oleracea
Bo1g114840
I
Bo3g073080
Brassica oleracea
Bo3g073080
I
Bo4g012940
Brassica oleracea
Bo4g012940
I
Bo5g115300
Brassica oleracea
Bo5g115300
I
Bo6g006970
Brassica oleracea
Bo6g006970
I
Bo6g018480
Brassica oleracea
Bo6g018480
I
Bo7g116570
Brassica oleracea
Bo7g116570
I
Bra011485
Brassica rapa
Bra011485
I
Bra022409
Brassica rapa
Bra022409
I
Bra037533
Brassica rapa
Bra037533
I
Bra040260
Brassica rapa
Bra040260
I
PK02169.1
Cannabis sativa
PK02169.1
I
PK18009.1
Cannabis sativa
PK18009.1
D
Cagra.10917s0002
Capsella grandiflora
Cagra.10917s0002
I
Cagra.1305s0026
Capsella grandiflora
Cagra.1305s0026
I
Cagra.2481s0016
Capsella grandiflora
Cagra.2481s0016
I
Cagra.4978s0002
Capsella grandiflora
Cagra.4978s0002
I
Carubv10006251m.g
Capsella rubella
Carubv10006251m.g
I
Carubv10009177m.g
Capsella rubella
Carubv10009177m.g
I
Carubv10013729m.g
Capsella rubella
Carubv10013729m.g
I
evm.TU.supercontig_49.26
Carica papaya
evm.TU.supercontig_49.26
I
evm.TU.supercontig_5.28
Carica papaya
evm.TU.supercontig_5.28
I
evm.TU.supercontig_62.4
Carica papaya
evm.TU.supercontig_62.4
I
Ca_00791
Cicer arietinum
Ca_00791
I
Ca_01548
Cicer arietinum
Ca_01548
I
Ca_06458
Cicer arietinum
Ca_06458
I
Cla016272
Citrullus lanatus
Cla016272
I
Cla017970
Citrullus lanatus
Cla017970
I
Cla022926
Citrullus lanatus
Cla022926
I
Ciclev10001159m.g
Citrus clementina
Ciclev10001159m.g
I
Ciclev10028435m.g
Citrus clementina
Ciclev10028435m.g
I
Ciclev10028635m.g
Citrus clementina
Ciclev10028635m.g
I
orange1.1g013197m.g
Citrus sinensis
orange1.1g013197m.g
I
orange1.1g021624m.g
Citrus sinensis
orange1.1g021624m.g
I
orange1.1g025340m.g
Citrus sinensis
orange1.1g025340m.g
I
orange1.1g037676m.g
Citrus sinensis
orange1.1g037676m.g
I
Cucsa.219780
Cucumis sativus
Cucsa.219780
I
Cucsa.241090
Cucumis sativus
Cucsa.241090
I
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
Cucsa.396070
Cucumis sativus
Cucsa.396070
I
Eucgr.F02337
Eucalyptus grandis
Eucgr.F02337
I
Eucgr.G01436
Eucalyptus grandis
Eucgr.G01436
I
Eucgr.I01145
Eucalyptus grandis
Eucgr.I01145
I
Thhalv10011493m.g
Eutrema salsugineum
Thhalv10011493m.g
I
Thhalv10012271m.g
Eutrema salsugineum
Thhalv10012271m.g
I
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
Thhalv10020772m.g
Eutrema salsugineum
Thhalv10020772m.g
I
Thhalv10025203m.g
Eutrema salsugineum
Thhalv10025203m.g
I
gene09110-v1.0-hybrid
Fragaria vesca
gene09110-v1.0-hybrid
I
gene28250-v1.0-hybrid
Fragaria vesca
gene28250-v1.0-hybrid
I
GLYMA04G04170
Glycine max
GLYMA04G04170
I
GLYMA04G14840
Glycine max
GLYMA04G14840
I
GLYMA06G04353
Glycine max
GLYMA06G04353
I
GLYMA07G33600
Glycine max
GLYMA07G33600
I
GLYMA10G08370
Glycine max
GLYMA10G08370
I
GLYMA13G22061
Glycine max
GLYMA13G22061
I
GLYMA19G37910
Glycine max
GLYMA19G37910
I
Gorai.002G240500
Gossypium raimondii
Gorai.002G240500
I
Gorai.005G102300
Gossypium raimondii
Gorai.005G102300
I
Gorai.005G237400
Gossypium raimondii
Gorai.005G237400
I
Gorai.006G155600
Gossypium raimondii
Gorai.006G155600
I
Gorai.008G024700
Gossypium raimondii
Gorai.008G024700
I
Gorai.009G212600
Gossypium raimondii
Gorai.009G212600
I
Gorai.009G275700
Gossypium raimondii
Gorai.009G275700
I
Gorai.013G044500
Gossypium raimondii
Gorai.013G044500
I
MLOC_34679
Hordeum vulgare
MLOC_34679
I
MLOC_4554
Hordeum vulgare
MLOC_4554
I
MLOC_61490
Hordeum vulgare
MLOC_61490
I
MLOC_66546
Hordeum vulgare
MLOC_66546
I
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
LPERR06G06440
Leersia perrieri
LPERR06G06440
I
LPERR08G14740
Leersia perrieri
LPERR08G14740
I
LPERR09G09170
Leersia perrieri
LPERR09G09170
I
Lus10002399.g
Linum usitatissimum
Lus10002399.g
I
Lus10006489.g
Linum usitatissimum
Lus10006489.g
I
Lus10009755.g
Linum usitatissimum
Lus10009755.g
I
Lus10014066.g
Linum usitatissimum
Lus10014066.g
I
Lus10014194.g
Linum usitatissimum
Lus10014194.g
I
Lus10017049.g
Linum usitatissimum
Lus10017049.g
I
Lus10021369.g
Linum usitatissimum
Lus10021369.g
I
Lus10022720.g
Linum usitatissimum
Lus10022720.g
I
Lus10027897.g
Linum usitatissimum
Lus10027897.g
I
chr1.CM0010.310.nd
Lotus japonicus
chr1.CM0010.310.nd
I
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I
LjT07K13.110.nd
Lotus japonicus
LjT07K13.110.nd
I
MDP0000144105
Malus domestica
MDP0000144105
I
MDP0000177486
Malus domestica
MDP0000177486
I
MDP0000231542
Malus domestica
MDP0000231542
I
MDP0000248567
Malus domestica
MDP0000248567
I
MDP0000296303
Malus domestica
MDP0000296303
I
MDP0000701734
Malus domestica
MDP0000701734
I
MDP0000740787
Malus domestica
MDP0000740787
I
cassava11518.m1
Manihot esculenta
cassava11518.m1
I
cassava12275.valid.m1
Manihot esculenta
cassava12275.valid.m1
I
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
cassava17300.m1
Manihot esculenta
cassava17300.m1
I
cassava32856.m1
Manihot esculenta
cassava32856.m1
I
cassava42669.valid.m1
Manihot esculenta
cassava42669.valid.m1
I
cassava42743.valid.m1
Manihot esculenta
cassava42743.valid.m1
I
cassava42744.valid.m1
Manihot esculenta
cassava42744.valid.m1
I
cassava42745.valid.m1
Manihot esculenta
cassava42745.valid.m1
I
MTR_3g101780
Medicago truncatula
MTR_3g101780
I
MTR_4g085910
Medicago truncatula
MTR_4g085910
I
MTR_7g104480
Medicago truncatula
MTR_7g104480
I
mgf002047m
Mimulus guttatus
mgf002047m
I
mgf002176m
Mimulus guttatus
mgf002176m
I
mgf007524m
Mimulus guttatus
mgf007524m
I
mgf014602m
Mimulus guttatus
mgf014602m
I
mgf015092m
Mimulus guttatus
mgf015092m
I
mgf020824m
Mimulus guttatus
mgf020824m
I
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
GSMUA_Achr3G07000_001
Musa acuminata
GSMUA_Achr3G07000_001
I
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
GSMUA_Achr5G05690_001
Musa acuminata
GSMUA_Achr5G05690_001
I
GSMUA_Achr5G24570_001
Musa acuminata
GSMUA_Achr5G24570_001
I
GSMUA_Achr6G04270_001
Musa acuminata
GSMUA_Achr6G04270_001
I
GSMUA_Achr6G30550_001
Musa acuminata
GSMUA_Achr6G30550_001
I
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
GSMUA_Achr9G27130_001
Musa acuminata
GSMUA_Achr9G27130_001
I
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
OBART01G37980
Oryza barthii
OBART01G37980
I
OBART06G07070
Oryza barthii
OBART06G07070
I
OBART08G17810
Oryza barthii
OBART08G17810
I
OB01G46760
Oryza brachyantha
OB01G46760
I
OB06G16510
Oryza brachyantha
OB06G16510
I
OB08G24950
Oryza brachyantha
OB08G24950
I
OB09G19140
Oryza brachyantha
OB09G19140
I
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
ORGLA02G0292000
Oryza glaberrima
ORGLA02G0292000
I
ORGLA06G0066000
Oryza glaberrima
ORGLA06G0066000
I
ORGLA08G0211300
Oryza glaberrima
ORGLA08G0211300
I
ORGLA09G0097200
Oryza glaberrima
ORGLA09G0097200
I
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
OGLUM02G34210
Oryza glumaepatula
OGLUM02G34210
I
OGLUM06G07500
Oryza glumaepatula
OGLUM06G07500
I
OGLUM08G18640
Oryza glumaepatula
OGLUM08G18640
I
OGLUM09G13130
Oryza glumaepatula
OGLUM09G13130
I
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
BGIOSGA005551
Oryza indica
BGIOSGA005551
I
BGIOSGA022536
Oryza indica
BGIOSGA022536
I
BGIOSGA028831
Oryza indica
BGIOSGA028831
I
BGIOSGA030899
Oryza indica
BGIOSGA030899
I
BGIOSGA040605
Oryza indica
BGIOSGA040605
I
OLONG_000475
Oryza longistaminata
OLONG_000475
I
OLONG_014546
Oryza longistaminata
OLONG_014546
I
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
OMERI02G32150
Oryza meridionalis
OMERI02G32150
I
OMERI06G08210
Oryza meridionalis
OMERI06G08210
I
OMERI09G10130
Oryza meridionalis
OMERI09G10130
I
ONIVA02G33490
Oryza nivara
ONIVA02G33490
I
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
ONIVA06G08350
Oryza nivara
ONIVA06G08350
I
ONIVA08G19830
Oryza nivara
ONIVA08G19830
I
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
OPUNC06G06690
Oryza punctata
OPUNC06G06690
I
OPUNC08G15700
Oryza punctata
OPUNC08G15700
I
OPUNC09G11090
Oryza punctata
OPUNC09G11090
I
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
ORUFI02G35260
Oryza rufipogon
ORUFI02G35260
I
ORUFI08G19970
Oryza rufipogon
ORUFI08G19970
I
ORUFI12G20810
Oryza rufipogon
ORUFI12G20810
I
OS01G0859300
Oryza sativa
OS01G0859300
I
BZIP23
Oryza sativa
OS02G0766700
I
BZIP46
Oryza sativa
OS06G0211200
I
OS08G0471950
Oryza sativa
OS08G0471950
D
OS09G0456200
Oryza sativa
OS09G0456200
I
Pavir.Ba02029
Panicum virgatum
Pavir.Ba02029
I
Pavir.Da01931
Panicum virgatum
Pavir.Da01931
I
Pavir.Fa00674
Panicum virgatum
Pavir.Fa00674
I
Pavir.Fb01750
Panicum virgatum
Pavir.Fb01750
I
Pavir.J31353
Panicum virgatum
Pavir.J31353
I
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
POPTR_0002s12710
Populus trichocarpa
POPTR_0002s12710
I
ABI5
Populus trichocarpa
POPTR_0006s08300
I
POPTR_0009s10400
Populus trichocarpa
POPTR_0009s10400
I
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
POPTR_0014s02810
Populus trichocarpa
POPTR_0014s02810
I
Pm001315
Prunus mume
Pm001315
I
Pm005288
Prunus mume
Pm005288
I
Pm021430
Prunus mume
Pm021430
I
Pm026185
Prunus mume
Pm026185
I
PRUPE_ppa006503mg
Prunus persica
PRUPE_ppa006503mg
I
PRUPE_ppa006752mg
Prunus persica
PRUPE_ppa006752mg
I
PRUPE_ppa019833mg
Prunus persica
PRUPE_ppa019833mg
I
29625.m000702
Ricinus communis
29625.m000702
I
29801.m003176
Ricinus communis
29801.m003176
I
30055.m001548
Ricinus communis
30055.m001548
I
30170.m013868
Ricinus communis
30170.m013868
I
SapurV1A.0001s2050
Salix purpurea
SapurV1A.0001s2050
I
SapurV1A.0167s0060
Salix purpurea
SapurV1A.0167s0060
I
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
SapurV1A.0643s0160
Salix purpurea
SapurV1A.0643s0160
I
SapurV1A.0878s0160
Salix purpurea
SapurV1A.0878s0160
I
SapurV1A.3185s0030
Salix purpurea
SapurV1A.3185s0030
I
SELMODRAFT_177659
Selaginella moellendorffii
SELMODRAFT_177659
I
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
SELMODRAFT_428822
Selaginella moellendorffii
SELMODRAFT_428822
I
SELMODRAFT_443424
Selaginella moellendorffii
SELMODRAFT_443424
I
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
Si001731m.g
Setaria italica
Si001731m.g
I
Si006889m.g
Setaria italica
Si006889m.g
I
Si013904m.g
Setaria italica
Si013904m.g
I
Si030114m.g
Setaria italica
Si030114m.g
I
Solyc01g108080.2
Solanum lycopersicum
Solyc01g108080.2
I
Solyc04g078840.2
Solanum lycopersicum
Solyc04g078840.2
I
Solyc09g009490.2
Solanum lycopersicum
Solyc09g009490.2
I
Solyc10g050210.1
Solanum lycopersicum
Solyc10g050210.1
I
Solyc11g044560.1
Solanum lycopersicum
Solyc11g044560.1
I
PGSC0003DMG400002660
Solanum tuberosum
PGSC0003DMG400002660
I
PGSC0003DMG400006211
Solanum tuberosum
PGSC0003DMG400006211
I
PGSC0003DMG400008011
Solanum tuberosum
PGSC0003DMG400008011
I
PGSC0003DMG400022931
Solanum tuberosum
PGSC0003DMG400022931
I
PGSC0003DMG400025889
Solanum tuberosum
PGSC0003DMG400025889
I
Sb03g040510
Sorghum bicolor
Sb03g040510
I
Sb06g026410
Sorghum bicolor
Sb06g026410
I
Sb07g022965
Sorghum bicolor
Sb07g022965
I
Sb08g003760
Sorghum bicolor
Sb08g003760
I
Sb10g007090
Sorghum bicolor
Sb10g007090
I
TCM_007074
Theobroma cacao
TCM_007074
I
TCM_022574
Theobroma cacao
TCM_022574
I
TCM_033824
Theobroma cacao
TCM_033824
I
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
Traes_4AS_F9C171219
Triticum aestivum
Traes_4AS_F9C171219
I
Traes_4BL_4C9A415F3
Triticum aestivum
Traes_4BL_4C9A415F3
I
Traes_4DL_F38ED7FB6
Triticum aestivum
Traes_4DL_F38ED7FB6
I
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
TRIUR3_15490
Triticum urartu
TRIUR3_15490
I
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
TRIUR3_26781
Triticum urartu
TRIUR3_26781
I
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
TRIUR3_33995
Triticum urartu
TRIUR3_33995
I
VIT_03s0063g00310
Vitis vinifera
VIT_03s0063g00310
I
DPBF2
Vitis vinifera
VIT_06s0080g00340
I
ABI5
Vitis vinifera
VIT_08s0007g03420
I
VIT_18s0001g04500
Vitis vinifera
VIT_18s0001g04500
I
ABF2
Vitis vinifera
VIT_18s0001g10450
I
GRMZM2G002075
Zea mays
GRMZM2G002075
I
GRMZM2G033413
Zea mays
GRMZM2G033413
I
GRMZM2G157722
Zea mays
GRMZM2G157722
I
GRMZM2G168079
Zea mays
GRMZM2G168079
I
GRMZM2G478417
Zea mays
GRMZM2G478417
I