Thhalv10021306m.g (Eutrema salsugineum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Thhalv10021306m.g T247359_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021306m LOB 35 133

Links

Other LOB family TFs
Other Eutrema salsugineum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.919
LBD22 Arabidopsis thaliana AT3G13850 N 0.919
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.919
Bo1g134830 Brassica oleracea Bo1g134830 N 0.869
Bo5g132010 Brassica oleracea Bo5g132010 N 0.859
Bra021513 Brassica rapa Bra021513 N 0.869
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.919
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.929
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.778
Ca_10077 Cicer arietinum Ca_10077 N 0.737
Cla015827 Citrullus lanatus Cla015827 N 0.768
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.768
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.717
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.758
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.768
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.778
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.737
MDP0000257227 Malus domestica MDP0000257227 N 0.758
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.758
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.778
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.778
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.747
mgf019664m Mimulus guttatus mgf019664m N 0.737
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.778
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.778
Pm013344 Prunus mume Pm013344 N 0.737
28694.m000665 Ricinus communis 28694.m000665 N 0.778
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.758
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.800
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.737
TCM_029052 Theobroma cacao TCM_029052 N 0.778
TCM_029050 Theobroma cacao TCM_029050 N 0.737