chr6.LjB02K20.190.nd (Lotus japonicus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 chr6.LjB02K20.190.nd T247433_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr6.LjB02K20.190.nd LOB 11 109

Links

Other LOB family TFs
Other Lotus japonicus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17299 Aegilops tauschii F775_17299 I
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I
ERF022 Arabidopsis thaliana AT1G33760 I
ERF021 Arabidopsis thaliana AT1G71450 D
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I
Bo2g072910 Brassica oleracea Bo2g072910 I
Bo5g086680 Brassica oleracea Bo5g086680 I
Bo6g046850 Brassica oleracea Bo6g046850 I
Bo6g094210 Brassica oleracea Bo6g094210 I
Bo6g113020 Brassica oleracea Bo6g113020 I
Bo8g027240 Brassica oleracea Bo8g027240 I
Bra003924 Brassica rapa Bra003924 I
Bra007975 Brassica rapa Bra007975 I
Bra010210 Brassica rapa Bra010210 I
Bra016136 Brassica rapa Bra016136 I
Bra028009 Brassica rapa Bra028009 I
PK15554.1 Cannabis sativa PK15554.1 I
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I
Carubv10011715m.g Capsella rubella Carubv10011715m.g I
Carubv10012215m.g Capsella rubella Carubv10012215m.g I
Carubv10022349m.g Capsella rubella Carubv10022349m.g I
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I
Ca_01325 Cicer arietinum Ca_01325 I
Ca_15064 Cicer arietinum Ca_15064 I
Cla012661 Citrullus lanatus Cla012661 I
Cla012665 Citrullus lanatus Cla012665 I
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I
Cucsa.237170 Cucumis sativus Cucsa.237170 I
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I
GLYMA01G44130 Glycine max GLYMA01G44130 I
GLYMA01G44140 Glycine max GLYMA01G44140 I
GLYMA03G41910 Glycine max GLYMA03G41910 I
GLYMA11G01640 Glycine max GLYMA11G01640 I
GLYMA16G02680 Glycine max GLYMA16G02680 I
GLYMA19G44580 Glycine max GLYMA19G44580 I
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I
MLOC_55144 Hordeum vulgare MLOC_55144 I
LPERR11G07100 Leersia perrieri LPERR11G07100 I
Lus10002953.g Linum usitatissimum Lus10002953.g I
Lus10006173.g Linum usitatissimum Lus10006173.g I
Lus10041050.g Linum usitatissimum Lus10041050.g I
Lus10041052.g Linum usitatissimum Lus10041052.g N
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I
MDP0000122739 Malus domestica MDP0000122739 I
MDP0000122740 Malus domestica MDP0000122740 I
MDP0000151428 Malus domestica MDP0000151428 I
MDP0000283350 Malus domestica MDP0000283350 I
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I
cassava45911.m1 Manihot esculenta cassava45911.m1 I
cassava8552.m1 Manihot esculenta cassava8552.m1 I
MTR_5g008550 Medicago truncatula MTR_5g008550 I
MTR_5g008590 Medicago truncatula MTR_5g008590 I
mgf020568m Mimulus guttatus mgf020568m I
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I
OB11G16300 Oryza brachyantha OB11G16300 I
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I
BGIOSGA034227 Oryza indica BGIOSGA034227 I
OMERI11G06840 Oryza meridionalis OMERI11G06840 I
ONIVA11G08160 Oryza nivara ONIVA11G08160 I
OPUNC11G07750 Oryza punctata OPUNC11G07750 I
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I
OS11G0242300 Oryza sativa OS11G0242300 I
Pavir.J22217 Panicum virgatum Pavir.J22217 I
Pavir.J26137 Panicum virgatum Pavir.J26137 I
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I
Pm004269 Prunus mume Pm004269 I
Pm004272 Prunus mume Pm004272 I
Pm018354 Prunus mume Pm018354 I
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I
27805.m000021 Ricinus communis 27805.m000021 I
28118.m000034 Ricinus communis 28118.m000034 I
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I
Si026882m.g Setaria italica Si026882m.g I
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I
Sb05g007135 Sorghum bicolor Sb05g007135 I
TCM_036269 Theobroma cacao TCM_036269 I
TCM_036270 Theobroma cacao TCM_036270 I
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I
TRIUR3_32331 Triticum urartu TRIUR3_32331 I
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I
AC198403.3_FG001 Zea mays AC198403.3_FG001 I