Sb10g027280 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb10g027280 T279343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.682 0.731
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.682 0.731
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.675 0.699
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.675 0.699
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.671 0.710
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.671 0.710
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.671 0.710
AtMYB81
M07049_2.00 		Arabidopsis thaliana
VTAACNGHWWH
DWWDCNGTTAB		 Dap-seq
OMalley et al.(2016)
MYB81_col_a 		0.668 0.667
AtMYB81
M07050_2.00 		Arabidopsis thaliana
DHHNYAACBGHWWH
DWWDCVGTTRNDDH		 Dap-seq
OMalley et al.(2016)
MYB81_colamp_a 		0.668 0.667
Q9FR42_TOBAC
M11076_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBAS1_01 		0.667 0.688
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.665 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g027280.1 Myb 27 74
Sb10g027280.1 Myb 80 125

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00954 Aegilops tauschii F775_00954 I 0.817
F775_08967 Aegilops tauschii F775_08967 I 0.680
F775_14392 Aegilops tauschii F775_14392 I 0.787
F775_23034 Aegilops tauschii F775_23034 I 0.713
F775_28392 Aegilops tauschii F775_28392 I 0.682
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.680
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.661
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I 0.677
AtMYB81 Arabidopsis lyrata Al_scaffold_0004_975 I 0.668
MYB101 Arabidopsis lyrata fgenesh2_kg.4__1233__AT2G32460.2 I 0.675
MYB97 Arabidopsis lyrata fgenesh2_kg.7__1539__AT4G26930.1 I 0.669
AtMYB81 Arabidopsis thaliana AT2G26960 D 0.668
MYB101 Arabidopsis thaliana AT2G32460 D 0.675
MYB97 Arabidopsis thaliana AT4G26930 I 0.669
ATMYB120 Arabidopsis thaliana AT5G55020 I 0.672
Bostr.23794s0867 Boechera stricta Bostr.23794s0867 I 0.675
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I 0.672
BRADI1G32720 Brachypodium distachyon BRADI1G32720 I 0.818
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.682
Bo3g026690 Brassica oleracea Bo3g026690 I 0.675
Bo4g046000 Brassica oleracea Bo4g046000 I 0.669
Bo4g076940 Brassica oleracea Bo4g076940 I 0.666
Bo4g178040 Brassica oleracea Bo4g178040 I 0.664
Bo9g119060 Brassica oleracea Bo9g119060 I 0.672
Bra002938 Brassica rapa Bra002938 I 0.672
Bra005597 Brassica rapa Bra005597 I 0.669
Bra012038 Brassica rapa Bra012038 I 0.666
Bra021791 Brassica rapa Bra021791 I 0.675
Cagra.0352s0034 Capsella grandiflora Cagra.0352s0034 I 0.675
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I 0.672
Cagra.9104s0001 Capsella grandiflora Cagra.9104s0001 I 0.668
Carubv10025227m.g Capsella rubella Carubv10025227m.g I 0.675
Carubv10025403m.g Capsella rubella Carubv10025403m.g I 0.668
Carubv10026070m.g Capsella rubella Carubv10026070m.g I 0.672
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.700
evm.TU.supercontig_34.210 Carica papaya evm.TU.supercontig_34.210 I 0.693
Cla005406 Citrullus lanatus Cla005406 I 0.681
Cla007782 Citrullus lanatus Cla007782 I 0.662
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.683
Ciclev10014958m.g Citrus clementina Ciclev10014958m.g I 0.665
orange1.1g039708m.g Citrus sinensis orange1.1g039708m.g I 0.665
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.683
Cucsa.060080 Cucumis sativus Cucsa.060080 I 0.664
Cucsa.148580 Cucumis sativus Cucsa.148580 I 0.662
Eucgr.A01122 Eucalyptus grandis Eucgr.A01122 I 0.670
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I 0.672
Thhalv10016567m.g Eutrema salsugineum Thhalv10016567m.g I 0.675
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.677
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.685
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.685
gene23946-v1.0-hybrid Fragaria vesca gene23946-v1.0-hybrid I 0.661
GLYMA04G15150 Glycine max GLYMA04G15150 I 0.665
GLYMA06G47000 Glycine max GLYMA06G47000 I 0.685
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.663
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.666
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.665
GLYMA13G38521 Glycine max GLYMA13G38521 I 0.669
GLYMA15G35860 Glycine max GLYMA15G35860 I 0.671
GLYMA18G10921 Glycine max GLYMA18G10921 I 0.674
Gorai.002G089900 Gossypium raimondii Gorai.002G089900 I 0.679
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I 0.675
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I 0.706
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I 0.683
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.717
Gam1 Hordeum vulgare Q96464_HORVU D 0.682
LPERR03G20110 Leersia perrieri LPERR03G20110 I 0.677
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.662
LPERR06G20610 Leersia perrieri LPERR06G20610 I 0.849
Lus10021539.g Linum usitatissimum Lus10021539.g I 0.678
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.672
Lus10027189.g Linum usitatissimum Lus10027189.g I 0.704
Lus10035275.g Linum usitatissimum Lus10035275.g I 0.704
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.672
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.678
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.669
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.674
MDP0000147309 Malus domestica MDP0000147309 I 0.707
MDP0000151688 Malus domestica MDP0000151688 I 0.681
MDP0000175835 Malus domestica MDP0000175835 I 0.669
MDP0000176798 Malus domestica MDP0000176798 I 0.681
MDP0000179306 Malus domestica MDP0000179306 I 0.685
MDP0000308617 Malus domestica MDP0000308617 I 0.688
cassava11031.m1 Manihot esculenta cassava11031.m1 I 0.676
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I 0.677
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.678
MTR_1g021230 Medicago truncatula MTR_1g021230 I 0.689
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.662
mgf002965m Mimulus guttatus mgf002965m I 0.668
mgf010934m Mimulus guttatus mgf010934m I 0.690
mgf019173m Mimulus guttatus mgf019173m I 0.690
mgf020500m Mimulus guttatus mgf020500m I 0.662
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.670
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.737
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.701
Q9FR42_TOBAC Nicotiana tabacum Q9FR42_TOBAC D 0.667
OBART01G34660 Oryza barthii OBART01G34660 I 0.665
OBART03G24120 Oryza barthii OBART03G24120 I 0.697
OBART06G20450 Oryza barthii OBART06G20450 I 0.675
OB01G43550 Oryza brachyantha OB01G43550 I 0.665
OB03G32840 Oryza brachyantha OB03G32840 I 0.697
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.697
ORGLA06G0168900 Oryza glaberrima ORGLA06G0168900 I 0.675
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.665
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.697
OGLUM06G21530 Oryza glumaepatula OGLUM06G21530 I 0.675
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.859
GAM1 Oryza indica BGIOSGA004670 I 0.665
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.859
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.675
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.665
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.697
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.665
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.697
OMERI06G21070 Oryza meridionalis OMERI06G21070 I 0.675
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.859
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.697
ONIVA06G24230 Oryza nivara ONIVA06G24230 I 0.675
ONIVA06G28020 Oryza nivara ONIVA06G28020 I 0.859
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.697
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.679
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.859
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.697
ORUFI06G21880 Oryza rufipogon ORUFI06G21880 I 0.675
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.859
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.665
GAMYB Oryza sativa OS01G0812000 I 0.665
OS03G0578900 Oryza sativa OS03G0578900 I 0.697
OS06G0679400 Oryza sativa OS06G0679400 I 0.859
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.859
Pavir.Da00534 Panicum virgatum Pavir.Da00534 I 0.670
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.870
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.682
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.671
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.723
myb.Ph3 Petunia x hybrida Q02994_PETHY D 0.671
gw1.238.44.1 Physcomitrella patens gw1.238.44.1 I 0.674
gw1.66.160.1 Physcomitrella patens gw1.66.160.1 I 0.674
POPTR_0009s02380 Populus trichocarpa POPTR_0009s02380 I 0.665
Pm015094 Prunus mume Pm015094 I 0.678
Pm016605 Prunus mume Pm016605 I 0.668
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.668
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.678
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.685
PRUPE_ppa022465mg Prunus persica PRUPE_ppa022465mg I 0.668
29823.m000215 Ricinus communis 29823.m000215 I 0.676
SapurV1A.0008s0050 Salix purpurea SapurV1A.0008s0050 I 0.665
SapurV1A.1897s0070 Salix purpurea SapurV1A.1897s0070 I 0.669
SapurV1A.1951s0020 Salix purpurea SapurV1A.1951s0020 I 0.665
SapurV1A.2567s0040 Salix purpurea SapurV1A.2567s0040 I 0.669
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.677
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.663
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.677
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.677
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.677
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.663
Si000907m.g Setaria italica Si000907m.g I 0.682
Si006555m.g Setaria italica Si006555m.g I 0.870
Si007070m.g Setaria italica Si007070m.g I 0.670
Si039629m.g Setaria italica Si039629m.g I 0.723
Solyc01g009070.2 Solanum lycopersicum Solyc01g009070.2 I 0.672
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.702
Solyc07g052300.2 Solanum lycopersicum Solyc07g052300.2 I 0.688
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.702
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I 0.671
PGSC0003DMG400022689 Solanum tuberosum PGSC0003DMG400022689 I 0.672
PGSC0003DMG400028949 Solanum tuberosum PGSC0003DMG400028949 I 0.688
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.690
Sb10g023665 Sorghum bicolor Sb10g023665 I 0.670
TCM_011907 Theobroma cacao TCM_011907 I 0.674
TCM_030853 Theobroma cacao TCM_030853 I 0.679
TCM_041010 Theobroma cacao TCM_041010 I 0.677
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.682
Traes_6AS_5562B97F7 Triticum aestivum Traes_6AS_5562B97F7 I 0.787
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I 0.787
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.817
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.817
TRIUR3_15006 Triticum urartu TRIUR3_15006 I 0.680
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.817
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.713
TRIUR3_22706 Triticum urartu TRIUR3_22706 I 0.787
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.682
VIT_06s0009g02480 Vitis vinifera VIT_06s0009g02480 I 0.665
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.707
VIT_19s0090g00590 Vitis vinifera VIT_19s0090g00590 I 0.663
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.690
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.690
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.682
GRMZM2G161512 Zea mays GRMZM2G161512 N 0.813
GRMZM2G343068 Zea mays GRMZM2G343068 N 0.742