PK11664.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK11664.1 T290392_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.717 0.814
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK11664.1 Myb 61 107
PK11664.1 Myb 113 159
PK11664.1 Myb 165 210

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.683
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.727
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.763
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.762
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.729
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.756
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.717
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.747
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.773
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.742
Bo5g139340 Brassica oleracea Bo5g139340 I 0.701
Bo1g010040 Brassica oleracea Bo1g010040 I 0.663
Bo1g144510 Brassica oleracea Bo1g144510 I 0.754
Bo9g184660 Brassica oleracea Bo9g184660 I 0.680
Bra034067 Brassica rapa Bra034067 I 0.754
Bra029762 Brassica rapa Bra029762 I 0.700
Bra009597 Brassica rapa Bra009597 I 0.690
Bra001311 Brassica rapa Bra001311 N 0.676
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.767
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.777
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.777
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.767
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.766
Ca_14925 Cicer arietinum Ca_14925 I 0.689
Cla023357 Citrullus lanatus Cla023357 I 0.662
Cla018173 Citrullus lanatus Cla018173 I 0.758
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.788
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.665
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.788
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.662
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.758
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.740
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.752
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.764
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.670
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.722
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.774
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.791
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.799
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.792
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.746
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.783
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.783
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.799
MDP0000219581 Malus domestica MDP0000219581 I 0.768
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.776
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.776
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.776
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.684
mgf019610m Mimulus guttatus mgf019610m I 0.774
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.786
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.785
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.722
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.728
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.728
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.672
MYB3R-2 Oryza sativa OS01G0841500 I 0.728
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.714
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.714
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.682
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.682
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.780
Pm002704 Prunus mume Pm002704 I 0.819
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.819
29846.m000184 Ricinus communis 29846.m000184 I 0.790
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.780
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.683
Si000842m.g Setaria italica Si000842m.g I 0.714
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.672
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.713
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.713
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.734
TCM_021936 Theobroma cacao TCM_021936 I 0.799
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.738
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.738
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.738
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.686
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.762
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.729