XP_002159396.1 (Hydra magnipapillata)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 XP_002159396.1 T307448_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.986 0.857
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.986 0.857
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.986 0.857
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.986 0.857
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.986 0.857
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.986 0.857
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.986 0.857
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.986 0.857
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.985 0.857
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.985 0.857
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.985 0.857
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.985 0.857
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.985 0.857
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.985 0.857
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.985 0.857
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.985 0.857
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.985 0.857
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.985 0.857
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.985 0.857
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.985 0.857
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.985 0.857
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.985 0.857
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.985 0.857
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.985 0.857
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.985 0.857
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.984 0.814
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.984 0.814
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.984 0.814
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.984 0.814
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.984 0.814
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.984 0.814
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.984 0.814
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.984 0.814
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.984 0.814
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.984 0.814
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.984 0.814
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.984 0.814
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.984 0.814
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.984 0.814
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.982 0.829
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.976 0.800
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.976 0.800
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.976 0.800
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.975 0.786
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.967 0.600
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.967 0.600
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.967 0.600
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.967 0.600
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.967 0.600
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.967 0.600
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.967 0.600
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.967 0.600
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.967 0.629
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.967 0.629
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.967 0.629
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.967 0.629
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.967 0.629
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.967 0.629
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.964 0.614
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.964 0.614
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.964 0.629
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.964 0.629
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.964 0.629
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.964 0.629
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.964 0.629
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.964 0.629
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.964 0.629
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.964 0.629
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.962 0.614
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.962 0.614
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.962 0.614
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.962 0.614
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.962 0.614
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.962 0.614
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.962 0.614
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.962 0.614
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.962 0.614
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.962 0.614
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.962 0.614
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.960 0.600
NR2C2
M03407_2.00 		Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB		 SELEX
Jolma et al.(2013)
NR2C2_1 		0.957 0.643
NR2C2
M05669_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX 		0.957 0.643
NR2C2
M08156_2.00 		Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0504.1 		0.957 0.643
NR2C2
M07990_2.00 		Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD 		0.957 0.643
NR2C2
M07991_2.00 		Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH		 ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD 		0.957 0.643
NR2C2
M07992_2.00 		Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD 		0.957 0.643
NR2C2
M08221_2.00 		Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH		 ChIP-seq
Contrino et al.(2012)
Mv97 		0.957 0.643
NR2C2
M08222_2.00 		Homo sapiens
TCARAGGTCA
TGACCTYTGA		 ChIP-seq
Contrino et al.(2012)
Mv98 		0.957 0.643
NR2C2
M09292_2.00 		Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY		 Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B 		0.957 0.643
Nr2c2
M09303_2.00 		Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY		 Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A 		0.957 0.643
NR2C2
M09611_2.00 		Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY		 Misc
Heinz et al.(2010)
Hela-TR4_GSE24685 		0.957 0.643
NR2C2
M11173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_03 		0.957 0.643
NR2C2
M11174_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_04 		0.957 0.643
NR2C2
M11175_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_01 		0.957 0.643
NR2C2
M11176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_03 		0.957 0.643
NR2C2
M11177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2_01 		0.957 0.643
NR2C2
M11178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2 		0.957 0.643
NR2C2
M11179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q3 		0.957 0.643
NR2C2
M05670_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX 		0.957 0.643
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.950 0.586
O77476_BRUPA
M02422_2.00 		Brugia pahangi
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6019 		0.947 0.571
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.942 0.586
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.942 0.586
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.942 0.586
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.942 0.586
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.942 0.586
Eip75B
M03928_2.00 		Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK		 SELEX
Nitta et al.(2015)
Eip75B_1 		0.933 0.557
Eip75B
M03929_2.00 		Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT		 SELEX
Nitta et al.(2015)
Eip75B_2 		0.933 0.557
Eip75B
M06416_2.00 		Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM		 B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568 		0.933 0.557
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.931 0.557
Hr78
M06430_2.00 		Drosophila melanogaster
HVAGGTCA
TGACCTBD		 B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239 		0.930 0.600
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.928 0.557
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.927 0.571
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.927 0.571
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.927 0.571
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.927 0.571
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.927 0.571
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.927 0.571
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.927 0.571
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.927 0.571
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.927 0.571
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.927 0.571
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.927 0.571
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.927 0.571
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.927 0.571
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.927 0.571
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.927 0.571
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.927 0.571
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.927 0.571
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.927 0.571
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.927 0.571
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.927 0.571
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.927 0.571
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.927 0.571
Rara
M00185_2.00 		Mus musculus
NRGGTCAN
NTGACCYN		 PBM
Badis et al.(2009)
Rara_1051 		0.922 0.571
RARA
M03369_2.00 		Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY		 SELEX
Jolma et al.(2013)
RARA_1 		0.922 0.571
RARA
M03370_2.00 		Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
RARA_2 		0.922 0.571
RARA
M03371_2.00 		Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT		 SELEX
Jolma et al.(2013)
RARA_3 		0.922 0.571
RARA
M03372_2.00 		Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT		 SELEX
Jolma et al.(2013)
RARA_4 		0.922 0.571
RARA
M03373_2.00 		Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW		 SELEX
Jolma et al.(2013)
RARA_5 		0.922 0.571
RARA
M03374_2.00 		Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT		 SELEX
Jolma et al.(2013)
RARA_6 		0.922 0.571
Rara
M03432_2.00 		Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT		 SELEX
Jolma et al.(2013)
Rara_1 		0.922 0.571
Rara
M03433_2.00 		Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT		 SELEX
Jolma et al.(2013)
Rara_2 		0.922 0.571
Rara
M03434_2.00 		Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
Rara_3 		0.922 0.571
RARA
M05607_2.00 		Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1 		0.922 0.571
RARA
M05608_2.00 		Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2 		0.922 0.571
RARA
M05609_2.00 		Homo sapiens
NRRGGTCANV
BNTGACCYYN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3 		0.922 0.571
RARA
M05878_2.00 		Homo sapiens
RAGGTCA
TGACCTY		 SMiLE-seq
Isakova et al.(2017)
RARa 		0.922 0.571
RARA
M09277_2.00 		Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY		 Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A 		0.922 0.571
Rara
M09329_2.00 		Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY		 Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A 		0.922 0.571
RARA
M11137_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B1_Q6 		0.922 0.571
RARA
M05610_2.00 		Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1 		0.922 0.571
RARA
M05611_2.00 		Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2 		0.922 0.571
RARA
M05612_2.00 		Homo sapiens
NRAGGTCANN
NNTGACCTYN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3 		0.922 0.571
Rarb
M02401_2.00 		Mus musculus
NRRGGTCAHN
NDTGACCYYN		 PBM
Weirauch et al.(2014)
pTH2804 		0.921 0.571
RARB
M03355_2.00 		Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT		 SELEX
Jolma et al.(2013)
RARB_1 		0.921 0.571
Rarb
M03423_2.00 		Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW		 SELEX
Jolma et al.(2013)
Rarb_1 		0.921 0.571
Rarb
M03424_2.00 		Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY		 SELEX
Jolma et al.(2013)
Rarb_2 		0.921 0.571
Rarb
M03425_2.00 		Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT		 SELEX
Jolma et al.(2013)
Rarb_3 		0.921 0.571
RARB
M05563_2.00 		Homo sapiens
NHAAGGTCAN
NTGACCTTDN		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1 		0.921 0.571
RARB
M05564_2.00 		Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2 		0.921 0.571
RARB
M05565_2.00 		Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3 		0.921 0.571
RARB
M11094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B2_Q6 		0.921 0.571
RARB
M05566_2.00 		Homo sapiens
NHRAGGTCAH
DTGACCTYDN		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1 		0.921 0.571
RARB
M05567_2.00 		Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2 		0.921 0.571
RARB
M05568_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3 		0.921 0.571
Eip78C
M06427_2.00 		Drosophila melanogaster
RGGTCA
TGACCY		 B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865 		0.919 0.529
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.906 0.600
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.906 0.600
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.906 0.600
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.906 0.600
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.906 0.600
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.906 0.600
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.895 0.600
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.895 0.600
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.895 0.600
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.895 0.600
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.895 0.600
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.895 0.600
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.895 0.600
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.895 0.600
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.895 0.600
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.895 0.600
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.895 0.600
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.895 0.600
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.895 0.600
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.895 0.600
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.895 0.600
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.893 0.529
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.893 0.557
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.893 0.557
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.893 0.557
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.893 0.557
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.893 0.557
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.893 0.557
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.893 0.557
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.893 0.557
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.893 0.557
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.892 0.586
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.892 0.586
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.892 0.586
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.892 0.586
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.892 0.586
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.892 0.586
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.892 0.586
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.892 0.586
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.892 0.586
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.892 0.586
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.892 0.586
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.892 0.586
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.892 0.586
Nr1h3
M09301_2.00 		Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB		 Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A 		0.887 0.529
NR1H3
M09264_2.00 		Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN		 Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B 		0.885 0.529
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.883 0.514
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.883 0.543
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.864 0.571
PPARD
M05581_2.00 		Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1 		0.861 0.514
PPARD
M05582_2.00 		Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2 		0.861 0.514
PPARD
M05583_2.00 		Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1 		0.861 0.514
PPARD
M05584_2.00 		Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2 		0.861 0.514
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.854 0.514
Pparg
M05884_2.00 		Mus musculus
HWNTRGGKYANB
VNTRMCCYANWD		 SMiLE-seq
Isakova et al.(2017)
PPARg 		0.841 0.529
PPARG
M02707_2.00 		Homo sapiens
STRGGTCANNDTGACCYANW
WNTRGGTCAHNNTGACCYAS		 SELEX
Mathelier et al.(2014)
MA0066.1 		0.841 0.529
PPARG
M09278_2.00 		Homo sapiens
VWSKRGGKSARAGGKSA
TSMCCTYTSMCCYMSWB		 Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A 		0.841 0.529
Pparg
M09299_2.00 		Mus musculus
HWBTRGGBSARAGGKNA
TNMCCTYTSVCCYAVWD		 Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A 		0.841 0.529
Pparg
M09612_2.00 		Mus musculus
TRGGNCARAGGKCA
TGMCCTYTGNCCYA		 Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511 		0.841 0.529
PPARG
M11138_2.00 		Homo sapiens
NNDRRGGTCAAAGGTCAHVND
HNBDTGACCTTTGACCYYHNN		 Transfac
Matys et al.(2006)
V$PPARG_01 		0.841 0.529
PPARG
M11139_2.00 		Homo sapiens
AWBTRGGTCACNDTGACCTASTT
AASTAGGTCAHNGTGACCYAVWT		 Transfac
Matys et al.(2006)
V$PPARG_02 		0.841 0.529
PPARG
M11140_2.00 		Homo sapiens
WWBHRGGNYAAAGKTCA
TGAMCTTTRNCCYDVWW		 Transfac
Matys et al.(2006)
V$PPARG_03 		0.841 0.529
PPARG
M11141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARG_Q6 		0.841 0.529
PPARA
M09295_2.00 		Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN		 Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B 		0.837 0.514
Ppara
M09314_2.00 		Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD		 Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A 		0.837 0.514
PPARA
M11183_2.00 		Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG		 Transfac
Matys et al.(2006)
V$PPARA_01 		0.837 0.514
PPARA
M11184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARA_Q6 		0.837 0.514
NR1H4
M00368_2.00 		Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF 		0.834 0.500
NR1H4
M05876_2.00 		Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4 		0.834 0.500
NR1H4
M08152_2.00 		Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1 		0.834 0.500
NR1H4
M09263_2.00 		Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B 		0.834 0.500
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.834 0.500
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.834 0.500
NR1H4
M11086_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2 		0.834 0.500
NR1H4
M11087_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3 		0.834 0.500
NR1H4
M11088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5 		0.834 0.500
NR1H4
M11089_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5 		0.834 0.500
NR1H4
M00367_2.00 		Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R 		0.834 0.486
THRB
M03379_2.00 		Homo sapiens
DTGACCTBATVAGGTCAN
NTGACCTBATVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_1 		0.833 0.529
THRB
M03380_2.00 		Homo sapiens
DTGACCTBANTRAGGTCAH
DTGACCTYANTVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_2 		0.833 0.529
THRB
M03381_2.00 		Homo sapiens
NTGWCCTYADNTRAGGTCAH
DTGACCTYANHTRAGGWCAN		 SELEX
Jolma et al.(2013)
THRB_3 		0.833 0.529
THRB
M05629_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1 		0.833 0.529
THRB
M05630_2.00 		Homo sapiens
NRRGGTCAYGACCYYN
NRRGGTCRTGACCYYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2 		0.833 0.529
THRB
M05633_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1 		0.833 0.529
THRB
M05634_2.00 		Homo sapiens
TRAGGTCABVYVAGGTCAH
DTGACCTBRBVTGACCTYA		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2 		0.833 0.529
THRB
M09285_2.00 		Homo sapiens
VRVSYVABVKSAGGWCA
TGWCCTSMBVTBRSBYB		 Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C 		0.833 0.529
THRB
M11150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01 		0.833 0.529
THRB
M05631_2.00 		Homo sapiens
NRGGTYRDRGGKYRN
NYRMCCYHYRACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1 		0.833 0.529
THRB
M05632_2.00 		Homo sapiens
NNRGGTCAYGACCYBN
NVRGGTCRTGACCYNN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2 		0.833 0.529
THRB
M05635_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1 		0.833 0.529
THRB
M05636_2.00 		Homo sapiens
YRAGGWCAYGYRAGGWCAH
DTGWCCTYRCRTGWCCTYR		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2 		0.833 0.529
Nr1h2
M09620_2.00 		Mus musculus
RGGTYACTNNAGGTCA
TGACCTNNAGTRACCY		 Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512 		0.827 0.543
Esr1
M00813_2.00 		Mus musculus
NRKGTCANNN
NNNTGACMYN		 PBM
Weirauch et al.(2013)
pTH3510 		0.826 0.529
ESR1
M03356_2.00 		Homo sapiens
NRGGTCAMVRTGACCTK
MAGGTCAYBKTGACCYN		 SELEX
Jolma et al.(2013)
ESR1_1 		0.826 0.529
ESR1
M05569_2.00 		Homo sapiens
NAGGTCAYSRTGACCTN
NAGGTCAYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX 		0.826 0.529
ESR1
M05571_2.00 		Homo sapiens
NRGGTCANSNTGACCYN
NRGGTCANSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX 		0.826 0.529
ESR1
M07985_2.00 		Homo sapiens
DNBYMAAGGTCANN
NNTGACCTTKRVNH		 ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford 		0.826 0.529
ESR1
M08217_2.00 		Homo sapiens
NHNRGGTCANNNTGNCCY
RGGNCANNNTGACCYNDN		 ChIP-seq
Contrino et al.(2012)
Mv66 		0.826 0.529
ESR1
M08218_2.00 		Homo sapiens
CCAAGGTCAS
STGACCTTGG		 ChIP-seq
Contrino et al.(2012)
Mv67 		0.826 0.529
ESR1
M09267_2.00 		Homo sapiens
RGGKCABMNTGMCCY
RGGKCANKVTGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A 		0.826 0.529
Esr1
M09309_2.00 		Mus musculus
RGGDCABKSTGWCCY
RGGWCASMVTGHCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A 		0.826 0.529
ESR1
M09604_2.00 		Homo sapiens
NRGGTCANNNTGACC
GGTCANNNTGACCYN		 Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished 		0.826 0.529
ESR1
M11098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_01 		0.826 0.529
ESR1
M11099_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q4 		0.826 0.529
ESR1
M11100_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01 		0.826 0.529
ESR1
M11101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02 		0.826 0.529
ESR1
M11102_2.00 		Homo sapiens
NHRGGTCAVNNHNNHYBNN
NNVRDNNDNNBTGACCYDN		 Transfac
Matys et al.(2006)
V$ER_Q6 		0.826 0.529
ESR1
M11103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_04 		0.826 0.529
ESR1
M11104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_05 		0.826 0.529
ESR1
M05570_2.00 		Homo sapiens
NAGGTCAYSRYGACCTH
DAGGTCRYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX 		0.826 0.529
ESR1
M05572_2.00 		Homo sapiens
NRGGTCANSBYGACCYN
NRGGTCRVSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX 		0.826 0.529
Esr2
M01297_2.00 		Mus musculus
NNRGGTCAH
DTGACCYNN		 PBM
Lambert et al.(2019)
pTH3511 		0.817 0.529
ESR2
M08154_2.00 		Homo sapiens
RGGTCASNNWGNCCY
RGGNCWNNSTGACCY		 ChIP-seq
Mathelier et al.(2014)
MA0258.2 		0.817 0.529
ESR2
M09279_2.00 		Homo sapiens
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A 		0.817 0.529
Esr2
M09311_2.00 		Mus musculus
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A 		0.817 0.529
ESR2
M11146_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERBETA_Q5_01 		0.817 0.529
ESR2
M11147_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERBETA_Q5 		0.817 0.529
THRA
M03368_2.00 		Homo sapiens
DTGACCTYATVAGGTCAH
DTGACCTBATRAGGTCAH		 SELEX
Jolma et al.(2013)
THRA_1 		0.803 0.529
THRA
M09275_2.00 		Homo sapiens
RGKWSDNNYVAGGWSAN
NTSWCCTBRNNHSWMCY		 Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C 		0.803 0.529
Thra
M09333_2.00 		Mus musculus
VRGGKCANNYVRGGHCA
TGDCCYBRNNTGMCCYB		 Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C 		0.803 0.529
Thra
M09619_2.00 		Mus musculus
GGKCANNYVRGGHCA
TGDCCYBRNNTGMCC		 Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347 		0.803 0.529
THRA
M11135_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RALPHA_Q6 		0.803 0.529
GAG_AVIER
M11193_2.00 		Avian erythroblastosis virus
VHNTRAGGTCACSSNN
NNSSGTGACCTYANDB		 Transfac
Matys et al.(2006)
V$T3R_01 		0.800 0.543
NR4A1
M05601_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1 		0.794 0.557
NR4A1
M05602_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2 		0.794 0.557
NR4A1
M08153_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 ChIP-seq
Mathelier et al.(2014)
MA1112.1 		0.794 0.557
NR4A1
M09274_2.00 		Homo sapiens
AAAKGBCAN
NTGVCMTTT		 Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A 		0.794 0.557
NR4A1
M09608_2.00 		Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN		 Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363 		0.794 0.557
NR4A1
M11132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_01 		0.794 0.557
NR4A1
M11133_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_02 		0.794 0.557
NR4A1
M11134_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5 		0.794 0.557
NR4A1
M05603_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1 		0.794 0.557
NR4A1
M05604_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2 		0.794 0.557
Nr4a1
M09317_2.00 		Mus musculus
NRAADGKCA
TGMCHTTYN		 Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B 		0.794 0.543
NR1D2
M05659_2.00 		Homo sapiens
DWWNKRKGTYANTRKGTYRN
NYRACMYANTRACMYMNWWH		 SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX 		0.781 0.557
Nr1d2
M09313_2.00 		Mus musculus
NVRDVWVTRRGTCANDVDN
NHBHNTGACYYABWBHYBN		 Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A 		0.781 0.557
NR1D2
M05660_2.00 		Homo sapiens
NWWNBRGGKYAVTRGGKCRN
NYGMCCYABTRMCCYVNWWN		 SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX 		0.781 0.557
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.777 0.486
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.777 0.486
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.777 0.486
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.777 0.486
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.777 0.486
NR1D1
M05605_2.00 		Homo sapiens
NWWNTRGGTYASTRGGTCAN
NTGACCYASTRACCYANWWN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX 		0.777 0.557
NR1D1
M09276_2.00 		Homo sapiens
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B 		0.777 0.557
Nr1d1
M09310_2.00 		Mus musculus
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A 		0.777 0.557
NR1D1
M11136_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6 		0.777 0.557
NR1D1
M05606_2.00 		Homo sapiens
NAWNKRGGTYAGTRGGTCRN
NYGACCYACTRACCYMNWTN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX 		0.777 0.557
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.763 0.543
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.763 0.543
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.763 0.543
Hnf4
M03935_2.00 		Drosophila melanogaster
RGGKCAAAGGTCA
TGACCTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_1 		0.756 0.614
Hnf4
M03936_2.00 		Drosophila melanogaster
RGGKCAAAGTYCA
TGRACTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_2 		0.756 0.614
Hnf4
M03937_2.00 		Drosophila melanogaster
RGTVCAAAGKTCR
YGAMCTTTGBACY		 SELEX
Nitta et al.(2015)
Hnf4_3 		0.756 0.614
Hnf4
M03938_2.00 		Drosophila melanogaster
RTGRACTTTGGACY
RGTCCAAAGTYCAY		 SELEX
Nitta et al.(2015)
Hnf4_4 		0.756 0.614
Hnf4
M06428_2.00 		Drosophila melanogaster
DKNKWSSNGGGGTCA
TGACCCCNSSWMNMH		 B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914 		0.756 0.614
Hnf4
M06429_2.00 		Drosophila melanogaster
GGGGTCAH
DTGACCCC		 B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914 		0.756 0.614
Hnf4a
M00182_2.00 		Mus musculus
NNRGKYMRNN
NNYKRMCYNN		 PBM
Badis et al.(2009)
Hnf4a_2640 		0.753 0.571
HNF4A
M03357_2.00 		Homo sapiens
RWTGRACTTTGSACYB
VRGTSCAAAGTYCAWY		 SELEX
Jolma et al.(2013)
HNF4A_1 		0.753 0.571
HNF4A
M03358_2.00 		Homo sapiens
RRGGKCAAAGTCCRBN
NVYGGACTTTGMCCYY		 SELEX
Jolma et al.(2013)
HNF4A_2 		0.753 0.571
HNF4A
M03359_2.00 		Homo sapiens
NDTGGACTTTGDACYB
VRGTHCAAAGTCCAHN		 SELEX
Jolma et al.(2013)
HNF4A_3 		0.753 0.571
HNF4A
M03360_2.00 		Homo sapiens
RRGGTCAAAGKTCA
TGAMCTTTGACCYY		 SELEX
Jolma et al.(2013)
HNF4A_4 		0.753 0.571
HNF4A
M03361_2.00 		Homo sapiens
VRGGTCAAAGTCCANN
NNTGGACTTTGACCYB		 SELEX
Jolma et al.(2013)
HNF4A_5 		0.753 0.571
HNF4A
M03362_2.00 		Homo sapiens
RRGTYCAAAGKTCAH
DTGAMCTTTGRACYY		 SELEX
Jolma et al.(2013)
HNF4A_6 		0.753 0.571
Hnf4a
M03426_2.00 		Mus musculus
RRGGTCAAAGTCCANN
NNTGGACTTTGACCYY		 SELEX
Jolma et al.(2013)
Hnf4a_1 		0.753 0.571
HNF4A
M05573_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_1 		0.753 0.571
HNF4A
M05574_2.00 		Homo sapiens
RRGGTCAAAGTCCAH
DTGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_2 		0.753 0.571
HNF4A
M05575_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_3 		0.753 0.571
HNF4A
M05576_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_4 		0.753 0.571
HNF4A
M08219_2.00 		Homo sapiens
VRGDBCAAAGKYCAN
NTGRMCTTTGVHCYB		 ChIP-seq
Contrino et al.(2012)
Mv81 		0.753 0.571
HNF4A
M08220_2.00 		Homo sapiens
AGTCCA
TGGACT		 ChIP-seq
Contrino et al.(2012)
Mv82 		0.753 0.571
HNF4A
M09268_2.00 		Homo sapiens
VRGKNCAAAGTYCA
TGRACTTTGNMCYB		 Misc
Kulakovskiy et al.(2013)
HNF4A_HUMAN.H11MO.0.A 		0.753 0.571
Hnf4a
M09308_2.00 		Mus musculus
NRGKBCAAAGTYCA
TGRACTTTGVMCYN		 Misc
Kulakovskiy et al.(2013)
HNF4A_MOUSE.H11MO.0.A 		0.753 0.571
HNF4A
M09605_2.00 		Homo sapiens
NNVRGDNCAAAGKYCA
TGRMCTTTGNHCYBNN		 Misc
Heinz et al.(2010)
HepG2-HNF4a_GSE25021 		0.753 0.571
HNF4A
M11105_2.00 		Homo sapiens
VRGGNCAAAGKYCRB
VYGRMCTTTGNCCYB		 Transfac
Matys et al.(2006)
V$HNF4_01_B 		0.753 0.571
HNF4A
M11106_2.00 		Homo sapiens
NNNRGDBYAAAGKBCANND
HNNTGVMCTTTRVHCYNNN		 Transfac
Matys et al.(2006)
V$HNF4_01 		0.753 0.571
HNF4A
M11107_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_09 		0.753 0.571
HNF4A
M11108_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_10 		0.753 0.571
HNF4A
M11109_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4ALPHA_Q6 		0.753 0.571
HNF4A
M11110_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q3 		0.753 0.571
HNF4A
M11111_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q6_01 		0.753 0.571
HNF4A
M11112_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_01 		0.753 0.571
HNF4A
M11113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_02 		0.753 0.571
HNF4A
M11114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_03 		0.753 0.571
HNF4A
M11115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_04 		0.753 0.571
HNF4A
M05577_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_1 		0.753 0.571
HNF4A
M05578_2.00 		Homo sapiens
RRGGTCAAAGTCCRN
NYGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_2 		0.753 0.571
HNF4A
M05579_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_3 		0.753 0.571
HNF4A
M05580_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_4 		0.753 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002159396.1 Nuclear receptor 164 233

Links

Other Nuclear receptor family TFs
Other Hydra magnipapillata TFs

3123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04501 Aegilops tauschii F775_04501 I
F775_11989 Aegilops tauschii F775_11989 I
F775_14820 Aegilops tauschii F775_14820 I
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I
Al_scaffold_0004_2818 Arabidopsis lyrata Al_scaffold_0004_2818 I
Al_scaffold_0006_1828 Arabidopsis lyrata Al_scaffold_0006_1828 I
fgenesh2_kg.2__2014__AT1G77200.1 Arabidopsis lyrata fgenesh2_kg.2__2014__AT1G77200.1 I
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I
fgenesh2_kg.7__2633__AT4G16750.1 Arabidopsis lyrata fgenesh2_kg.7__2633__AT4G16750.1 I
scaffold_301905.1 Arabidopsis lyrata scaffold_301905.1 I
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I
ERF037 Arabidopsis thaliana AT1G77200 D
ERF042 Arabidopsis thaliana AT2G25820 I
ERF038 Arabidopsis thaliana AT2G35700 D
ERF034 Arabidopsis thaliana AT2G44940 D
AT3G16280 Arabidopsis thaliana AT3G16280 D
ERF035 Arabidopsis thaliana AT3G60490 D
ERF039 Arabidopsis thaliana AT4G16750 D
ERF043 Arabidopsis thaliana AT4G32800 D
DREB3 Arabidopsis thaliana AT5G11590 I
TINY Arabidopsis thaliana AT5G25810 D
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I
Bostr.20129s0154 Boechera stricta Bostr.20129s0154 I
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I
Bostr.28625s0062 Boechera stricta Bostr.28625s0062 I
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I
Bostr.30275s0134 Boechera stricta Bostr.30275s0134 I
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I
BRADI5G17620 Brachypodium distachyon BRADI5G17620 I
BRADI5G17630 Brachypodium distachyon BRADI5G17630 N
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D
Bo1g009990 Brassica oleracea Bo1g009990 I
Bo1g053270 Brassica oleracea Bo1g053270 I
Bo2g010530 Brassica oleracea Bo2g010530 I
Bo3g028500 Brassica oleracea Bo3g028500 I
Bo3g037480 Brassica oleracea Bo3g037480 I
Bo3g171090 Brassica oleracea Bo3g171090 I
Bo4g024220 Brassica oleracea Bo4g024220 I
Bo4g036220 Brassica oleracea Bo4g036220 I
Bo4g158810 Brassica oleracea Bo4g158810 I
Bo4g195280 Brassica oleracea Bo4g195280 I
Bo5g126280 Brassica oleracea Bo5g126280 I
Bo6g077080 Brassica oleracea Bo6g077080 I
Bo6g083410 Brassica oleracea Bo6g083410 I
Bo6g121150 Brassica oleracea Bo6g121150 I
Bo7g095710 Brassica oleracea Bo7g095710 I
Bo7g104770 Brassica oleracea Bo7g104770 I
Bo7g115860 Brassica oleracea Bo7g115860 I
Bo8g095240 Brassica oleracea Bo8g095240 I
Bo9g011210 Brassica oleracea Bo9g011210 I
Bo9g170060 Brassica oleracea Bo9g170060 I
Bra000366 Brassica rapa Bra000366 I
Bra003415 Brassica rapa Bra003415 I
Bra004878 Brassica rapa Bra004878 I
Bra005314 Brassica rapa Bra005314 I
Bra007539 Brassica rapa Bra007539 I
Bra008952 Brassica rapa Bra008952 I
Bra009862 Brassica rapa Bra009862 I
Bra011383 Brassica rapa Bra011383 I
Bra012693 Brassica rapa Bra012693 I
Bra015686 Brassica rapa Bra015686 I
Bra023026 Brassica rapa Bra023026 I
Bra023332 Brassica rapa Bra023332 I
Bra027177 Brassica rapa Bra027177 I
Bra034273 Brassica rapa Bra034273 I
Bra034535 Brassica rapa Bra034535 I
Bra036552 Brassica rapa Bra036552 I
Bra037041 Brassica rapa Bra037041 I
Bra040092 Brassica rapa Bra040092 I
Bra040333 Brassica rapa Bra040333 I
PK01156.1 Cannabis sativa PK01156.1 I
PK25970.1 Cannabis sativa PK25970.1 I
PK28082.1 Cannabis sativa PK28082.1 I
PK29340.1 Cannabis sativa PK29340.1 I
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I
Cagra.21659s0001 Capsella grandiflora Cagra.21659s0001 I
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I
Cagra.6624s0013 Capsella grandiflora Cagra.6624s0013 I
Carubv10002601m.g Capsella rubella Carubv10002601m.g I
Carubv10003136m.g Capsella rubella Carubv10003136m.g I
Carubv10005867m.g Capsella rubella Carubv10005867m.g I
Carubv10006567m.g Capsella rubella Carubv10006567m.g I
Carubv10014506m.g Capsella rubella Carubv10014506m.g I
Carubv10017799m.g Capsella rubella Carubv10017799m.g I
Carubv10022336m.g Capsella rubella Carubv10022336m.g I
Carubv10023699m.g Capsella rubella Carubv10023699m.g I
Carubv10024051m.g Capsella rubella Carubv10024051m.g I
Carubv10024111m.g Capsella rubella Carubv10024111m.g I
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I
Ca_01908 Cicer arietinum Ca_01908 I
Ca_05941 Cicer arietinum Ca_05941 I
Ca_12765 Cicer arietinum Ca_12765 I
Ca_14911 Cicer arietinum Ca_14911 I
Ca_17883 Cicer arietinum Ca_17883 I
Ca_18948 Cicer arietinum Ca_18948 I
Ca_28185 Cicer arietinum Ca_28185 I
Cla004187 Citrullus lanatus Cla004187 I
Cla005715 Citrullus lanatus Cla005715 I
Cla021417 Citrullus lanatus Cla021417 I
Cla022553 Citrullus lanatus Cla022553 I
Cla023465 Citrullus lanatus Cla023465 I
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I
Cucsa.161310 Cucumis sativus Cucsa.161310 I
Cucsa.235510 Cucumis sativus Cucsa.235510 I
Cucsa.259750 Cucumis sativus Cucsa.259750 I
Cucsa.312570 Cucumis sativus Cucsa.312570 I
Cucsa.321050 Cucumis sativus Cucsa.321050 I
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I
Thhalv10019064m.g Eutrema salsugineum Thhalv10019064m.g I
Thhalv10022278m.g Eutrema salsugineum Thhalv10022278m.g I
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I
Thhalv10026276m.g Eutrema salsugineum Thhalv10026276m.g I
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I
GLYMA01G13410 Glycine max GLYMA01G13410 I
GLYMA01G35010 Glycine max GLYMA01G35010 I
GLYMA03G27050 Glycine max GLYMA03G27050 I
GLYMA04G08901 Glycine max GLYMA04G08901 I
GLYMA05G04920 Glycine max GLYMA05G04920 I
GLYMA05G35741 Glycine max GLYMA05G35741 I
GLYMA06G08990 Glycine max GLYMA06G08990 I
GLYMA07G02001 Glycine max GLYMA07G02001 I
GLYMA07G14560 Glycine max GLYMA07G14560 I
GLYMA08G03910 Glycine max GLYMA08G03910 I
GLYMA08G21650 Glycine max GLYMA08G21650 I
GLYMA09G32730 Glycine max GLYMA09G32730 I
GLYMA11G03790 Glycine max GLYMA11G03790 I
GLYMA13G43210 Glycine max GLYMA13G43210 I
GLYMA14G22740 Glycine max GLYMA14G22740 I
GLYMA15G02130 Glycine max GLYMA15G02130 I
GLYMA17G15310 Glycine max GLYMA17G15310 I
GLYMA17G27520 Glycine max GLYMA17G27520 I
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I
Gorai.001G049800 Gossypium raimondii Gorai.001G049800 I
Gorai.001G176500 Gossypium raimondii Gorai.001G176500 I
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I
Gorai.006G097000 Gossypium raimondii Gorai.006G097000 I
Gorai.007G028800 Gossypium raimondii Gorai.007G028800 I
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I
Gorai.008G107700 Gossypium raimondii Gorai.008G107700 I
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I
MLOC_3095 Hordeum vulgare MLOC_3095 I
MLOC_75601 Hordeum vulgare MLOC_75601 I
LPERR02G21590 Leersia perrieri LPERR02G21590 I
LPERR04G16900 Leersia perrieri LPERR04G16900 I
LPERR10G14320 Leersia perrieri LPERR10G14320 I
Lus10001601.g Linum usitatissimum Lus10001601.g I
Lus10002801.g Linum usitatissimum Lus10002801.g I
Lus10011123.g Linum usitatissimum Lus10011123.g I
Lus10025834.g Linum usitatissimum Lus10025834.g I
Lus10034949.g Linum usitatissimum Lus10034949.g I
Lus10038270.g Linum usitatissimum Lus10038270.g I
Lus10038607.g Linum usitatissimum Lus10038607.g I
Lus10043240.g Linum usitatissimum Lus10043240.g I
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I
MDP0000148178 Malus domestica MDP0000148178 I
MDP0000174352 Malus domestica MDP0000174352 I
MDP0000241650 Malus domestica MDP0000241650 I
MDP0000242611 Malus domestica MDP0000242611 I
MDP0000652413 Malus domestica MDP0000652413 I
MDP0000790788 Malus domestica MDP0000790788 I
cassava10514.m1 Manihot esculenta cassava10514.m1 I
cassava11373.m1 Manihot esculenta cassava11373.m1 I
cassava15622.m1 Manihot esculenta cassava15622.m1 I
cassava17185.m1 Manihot esculenta cassava17185.m1 I
cassava17387.m1 Manihot esculenta cassava17387.m1 I
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I
cassava19875.m1 Manihot esculenta cassava19875.m1 I
cassava19912.m1 Manihot esculenta cassava19912.m1 I
cassava29917.valid.m1 Manihot esculenta cassava29917.valid.m1 I
cassava33300.m1 Manihot esculenta cassava33300.m1 I
cassava34828.m1 Manihot esculenta cassava34828.m1 I
cassava4979.m1 Manihot esculenta cassava4979.m1 I
MTR_1g006660 Medicago truncatula MTR_1g006660 I
MTR_2g101340 Medicago truncatula MTR_2g101340 I
MTR_3g110205 Medicago truncatula MTR_3g110205 I
MTR_4g100650 Medicago truncatula MTR_4g100650 I
MTR_5g012910 Medicago truncatula MTR_5g012910 I
MTR_6g088405 Medicago truncatula MTR_6g088405 I
MTR_6g088425 Medicago truncatula MTR_6g088425 I
MTR_7g046260 Medicago truncatula MTR_7g046260 I
MTR_8g006410 Medicago truncatula MTR_8g006410 I
MTR_8g013860 Medicago truncatula MTR_8g013860 I
MTR_8g102800 Medicago truncatula MTR_8g102800 I
mgf019024m Mimulus guttatus mgf019024m I
mgf022802m Mimulus guttatus mgf022802m I
mgf022971m Mimulus guttatus mgf022971m I
mgf024703m Mimulus guttatus mgf024703m I
mgf024816m Mimulus guttatus mgf024816m I
mgf026339m Mimulus guttatus mgf026339m I
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I
OBART01G06440 Oryza barthii OBART01G06440 I
OBART04G20820 Oryza barthii OBART04G20820 I
OB04G27840 Oryza brachyantha OB04G27840 I
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I
BGIOSGA002184 Oryza indica BGIOSGA002184 I
BGIOSGA016882 Oryza indica BGIOSGA016882 I
BGIOSGA016883 Oryza indica BGIOSGA016883 I
BGIOSGA016884 Oryza indica BGIOSGA016884 I
OMERI01G06530 Oryza meridionalis OMERI01G06530 I
OMERI02G25900 Oryza meridionalis OMERI02G25900 I
OMERI02G25910 Oryza meridionalis OMERI02G25910 I
OMERI04G17260 Oryza meridionalis OMERI04G17260 I
OMERI04G17270 Oryza meridionalis OMERI04G17270 I
OMERI04G17290 Oryza meridionalis OMERI04G17290 I
OMERI06G18780 Oryza meridionalis OMERI06G18780 I
OMERI08G00520 Oryza meridionalis OMERI08G00520 I
ONIVA01G08000 Oryza nivara ONIVA01G08000 I
ONIVA02G28960 Oryza nivara ONIVA02G28960 I
ONIVA02G28990 Oryza nivara ONIVA02G28990 I
ONIVA04G19040 Oryza nivara ONIVA04G19040 I
ONIVA04G19060 Oryza nivara ONIVA04G19060 I
ONIVA04G19090 Oryza nivara ONIVA04G19090 I
ONIVA06G21640 Oryza nivara ONIVA06G21640 I
ONIVA10G21000 Oryza nivara ONIVA10G21000 I
OPUNC01G06210 Oryza punctata OPUNC01G06210 I
OPUNC02G24210 Oryza punctata OPUNC02G24210 I
OPUNC02G24230 Oryza punctata OPUNC02G24230 I
OPUNC04G18500 Oryza punctata OPUNC04G18500 I
OPUNC04G18520 Oryza punctata OPUNC04G18520 I
OPUNC04G18530 Oryza punctata OPUNC04G18530 I
OPUNC10G16830 Oryza punctata OPUNC10G16830 I
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I
OS01G0200600 Oryza sativa OS01G0200600 I
OS02G0656600 Oryza sativa OS02G0656600 I
OS02G0657000 Oryza sativa OS02G0657000 I
OS04G0549700 Oryza sativa OS04G0549700 I
OS04G0549800 Oryza sativa OS04G0549800 I
OS04G0550200 Oryza sativa OS04G0550200 I
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I
Pavir.Gb01129 Panicum virgatum Pavir.Gb01129 I
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I
Pavir.J17742 Panicum virgatum Pavir.J17742 I
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I
POPTR_0006s17670 Populus trichocarpa POPTR_0006s17670 I
POPTR_0006s25500 Populus trichocarpa POPTR_0006s25500 I
POPTR_0014s05500 Populus trichocarpa POPTR_0014s05500 I
POPTR_0018s09270 Populus trichocarpa POPTR_0018s09270 I
Pm005151 Prunus mume Pm005151 I
Pm013463 Prunus mume Pm013463 I
Pm017610 Prunus mume Pm017610 I
Pm023417 Prunus mume Pm023417 I
Pm027339 Prunus mume Pm027339 I
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I
PRUPE_ppa010130mg Prunus persica PRUPE_ppa010130mg I
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I
PRUPE_ppa011735mg Prunus persica PRUPE_ppa011735mg I
28353.m000054 Ricinus communis 28353.m000054 I
29794.m003381 Ricinus communis 29794.m003381 I
29912.m005463 Ricinus communis 29912.m005463 I
30146.m003535 Ricinus communis 30146.m003535 I
30174.m008790 Ricinus communis 30174.m008790 I
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I
SapurV1A.0272s0090 Salix purpurea SapurV1A.0272s0090 I
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I
SapurV1A.0490s0260 Salix purpurea SapurV1A.0490s0260 I
SapurV1A.0540s0020 Salix purpurea SapurV1A.0540s0020 I
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I
Si002749m.g Setaria italica Si002749m.g I
Si007144m.g Setaria italica Si007144m.g I
Si010703m.g Setaria italica Si010703m.g I
Si012254m.g Setaria italica Si012254m.g I
Si012688m.g Setaria italica Si012688m.g I
Si017995m.g Setaria italica Si017995m.g I
Si039427m.g Setaria italica Si039427m.g I
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I
Sb01g029065 Sorghum bicolor Sb01g029065 I
Sb03g002630 Sorghum bicolor Sb03g002630 I
Sb04g032960 Sorghum bicolor Sb04g032960 I
Sb06g024530 Sorghum bicolor Sb06g024530 I
Sb06g024540 Sorghum bicolor Sb06g024540 I
TCM_005639 Theobroma cacao TCM_005639 I
TCM_014892 Theobroma cacao TCM_014892 I
TCM_015930 Theobroma cacao TCM_015930 I
TCM_028851 Theobroma cacao TCM_028851 I
TCM_037194 Theobroma cacao TCM_037194 I
TCM_037811 Theobroma cacao TCM_037811 I
TCM_044478 Theobroma cacao TCM_044478 I
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I
Traes_2AL_0F08552FB Triticum aestivum Traes_2AL_0F08552FB I
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I
Traes_2BL_984787AC0 Triticum aestivum Traes_2BL_984787AC0 I
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I
VIT_11s0016g03350 Vitis vinifera VIT_11s0016g03350 I
VIT_14s0006g02290 Vitis vinifera VIT_14s0006g02290 I
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I
AC187157.4_FG001 Zea mays AC187157.4_FG001 I
GRMZM2G028969 Zea mays GRMZM2G028969 I
GRMZM2G073047 Zea mays GRMZM2G073047 I
GRMZM2G172936 Zea mays GRMZM2G172936 I
GRMZM5G806839 Zea mays GRMZM5G806839 I
GRMZM5G842961 Zea mays GRMZM5G842961 I
GRMZM5G889719 Zea mays GRMZM5G889719 I
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D