RSKR_0001067400 (Rhabditophanes kr3021)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 RSKR_0001067400 T310142_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.821 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001067400.1 Nuclear receptor 35 104

Links

Other Nuclear receptor family TFs
Other Rhabditophanes kr3021 TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.887
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.770
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.832
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.757
ALUE_0000387101 Ascaris lumbricoides ALUE_0000387101 I 0.799
ASU_00859 Ascaris suum ASU_00859 I 0.799
ASU_03870 Ascaris suum ASU_03870 I 0.821
ASU_13587 Ascaris suum ASU_13587 I 0.896
Bm4980 Brugia malayi Bm4980 I 0.800
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.800
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.783
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.812
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.891
CBN11572 Caenorhabditis brenneri CBN11572 I 0.791
CBN18198 Caenorhabditis brenneri CBN18198 I 0.821
CBN20749 Caenorhabditis brenneri CBN20749 I 0.821
CBN24827 Caenorhabditis brenneri CBN24827 I 0.750
CBG03844 Caenorhabditis briggsae CBG03844 I 0.821
CBG04204 Caenorhabditis briggsae CBG04204 I 0.775
CBG10855 Caenorhabditis briggsae CBG10855 I 0.747
CBG10857 Caenorhabditis briggsae CBG10857 I 0.789
CBG14485 Caenorhabditis briggsae CBG14485 I 0.785
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.791
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.821
nhr-64 Caenorhabditis elegans WBGene00003654 I 0.811
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.747
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.789
CJA08896 Caenorhabditis japonica CJA08896 I 0.747
CJA16040 Caenorhabditis japonica CJA16040 I 0.785
CRE00606 Caenorhabditis remanei CRE00606 I 0.789
CRE00809 Caenorhabditis remanei CRE00809 I 0.785
CRE08259 Caenorhabditis remanei CRE08259 I 0.821
CRE30089 Caenorhabditis remanei CRE30089 I 0.748
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.832
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.887
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.828
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.916
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.887
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.872
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.755
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.820
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.811
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.832
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.787
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.884
LOAG_08615 Loa loa LOAG_08615 I 0.819
LOAG_08636 Loa loa LOAG_08636 I 0.887
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.841
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.879
Minc02318 Meloidogyne incognita Minc02318 I 0.766
Minc05752 Meloidogyne incognita Minc05752 I 0.766
Minc11307 Meloidogyne incognita Minc11307 I 0.838
Minc13747 Meloidogyne incognita Minc13747 I 0.879
Minc17538 Meloidogyne incognita Minc17538 I 0.879
NECAME_11999 Necator americanus NECAME_11999 I 0.762
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.770
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.807
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.811
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.893
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.811
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.893
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.821
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.787
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.860
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.782
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.875
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.787
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.748
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.847
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.847
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.755
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.863
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.748
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.847
PPA22443 Pristionchus pacificus PPA22443 I 0.875
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.781
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.823
L596_g11029 Steinernema carpocapsae L596_g11029 I 0.775
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.850
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.865
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.766
L889_g11570 Steinernema feltiae L889_g11570 I 0.862
L889_g1557 Steinernema feltiae L889_g1557 I 0.760
L889_g17247 Steinernema feltiae L889_g17247 I 0.850
L889_g17254 Steinernema feltiae L889_g17254 I 0.784
L893_g13285 Steinernema glaseri L893_g13285 I 0.851
L893_g21283 Steinernema glaseri L893_g21283 I 0.862
L893_g28857 Steinernema glaseri L893_g28857 I 0.746
L893_g3565 Steinernema glaseri L893_g3565 I 0.753
L898_g23058 Steinernema monticolum L898_g23058 I 0.862
L898_g26357 Steinernema monticolum L898_g26357 I 0.850
L898_g7537 Steinernema monticolum L898_g7537 I 0.782
L898_g9866 Steinernema monticolum L898_g9866 I 0.757
L892_g1520 Steinernema scapterisci L892_g1520 I 0.775
L892_g17612 Steinernema scapterisci L892_g17612 I 0.769
L892_g4134 Steinernema scapterisci L892_g4134 I 0.863
L892_g4169 Steinernema scapterisci L892_g4169 I 0.804
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.787
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.784
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.915
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.787
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.784
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.888
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.915
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.784
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.787
SMUV_0000369301 Syphacia muris SMUV_0000369301 I 0.801
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.823
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.913