orange1.1g011640m.g (Citrus sinensis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 orange1.1g011640m.g T323599_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g011635m SBP 186 260
orange1.1g011637m SBP 186 260
orange1.1g011640m SBP 186 260
orange1.1g011646m SBP 186 260
orange1.1g011651m SBP 186 260
orange1.1g011662m SBP 186 260
orange1.1g013094m SBP 155 229
orange1.1g016364m SBP 186 260
orange1.1g016391m SBP 186 260
orange1.1g017206m SBP 186 260
orange1.1g017207m SBP 186 260
orange1.1g017311m SBP 186 260

Links

Other SBP family TFs
Other Citrus sinensis TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31908 Aegilops tauschii F775_31908 N 0.912
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.946
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.974
SPL2 Arabidopsis thaliana AT5G43270 N 0.974
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.970
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.913
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.950
Bo3g141480 Brassica oleracea Bo3g141480 I 0.902
Bo5g051980 Brassica oleracea Bo5g051980 I 0.886
Bo7g065290 Brassica oleracea Bo7g065290 N 0.975
Bo9g058970 Brassica oleracea Bo9g058970 N 0.974
Bra027478 Brassica rapa Bra027478 N 0.974
Bra033671 Brassica rapa Bra033671 N 0.974
PK16953.1 Cannabis sativa PK16953.1 N 0.983
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.973
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.973
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.958
Ca_08506 Cicer arietinum Ca_08506 I 0.905
Ca_11356 Cicer arietinum Ca_11356 I 0.969
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.985
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.944
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.974
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.948
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.913
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.967
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.928
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.909
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.942
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.923
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.911
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.909
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.940
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.936
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.935
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.958
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.973
MDP0000155354 Malus domestica MDP0000155354 N 0.981
MDP0000249364 Malus domestica MDP0000249364 N 0.922
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.966
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.967
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.960
mgf010397m Mimulus guttatus mgf010397m N 0.953
mgf019346m Mimulus guttatus mgf019346m I 0.971
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.958
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.958
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.915
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.931
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.923
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.944
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.952
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.937
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.972
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.957
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.926
OBART02G03260 Oryza barthii OBART02G03260 N 0.920
OBART06G26610 Oryza barthii OBART06G26610 N 0.906
OB02G12930 Oryza brachyantha OB02G12930 N 0.920
OB02G14840 Oryza brachyantha OB02G14840 N 0.913
OB06G34330 Oryza brachyantha OB06G34330 N 0.886
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.920
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.911
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.906
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.911
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.906
SPL3 Oryza indica BGIOSGA007499 N 0.920
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.911
SPL12 Oryza indica BGIOSGA020577 N 0.906
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.906
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.920
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.920
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.911
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.906
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.920
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.902
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.906
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.916
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.911
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.905
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.920
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.911
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.906
OS02G0139400 Oryza sativa OS02G0139400 N 0.920
SPL4 Oryza sativa OS02G0174100 N 0.911
SPL12 Oryza sativa OS06G0703500 N 0.906
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.930
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.930
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.963
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.963
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.931
Pm007020 Prunus mume Pm007020 N 0.981
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.981
29929.m004641 Ricinus communis 29929.m004641 I 0.977
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.963
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.931
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.963
Si017749m.g Setaria italica Si017749m.g N 0.928
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.928
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.951
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.951
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.897
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.950
TCM_008772 Theobroma cacao TCM_008772 N 0.972
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.920
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.909
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.909
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.912
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.920
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.909
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.962
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.958
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.919
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.919
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.950
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.950
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.946