Smad3 (Rattus norvegicus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSRNOG00000008620 T324930_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		1.000 1.000
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		1.000 1.000
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		1.000 1.000
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		1.000 1.000
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		1.000 1.000
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		1.000 1.000
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		1.000 1.000
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		1.000 1.000
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.723 0.723
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.723 0.723
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.723 0.723
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.703 0.703
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.703 0.703
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.703 0.703
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.703 0.703
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.703 0.703
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.703 0.703
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.703 0.703
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000037346 SMAD 31 131

Links

Other SMAD family TFs
Other Rattus norvegicus TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N
Aquca_100_00036 Aquilegia coerulea Aquca_100_00036 N
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N
ARF1 Arabidopsis thaliana AT1G59750 N
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N
Bo1g090350 Brassica oleracea Bo1g090350 N
Bo4g083590 Brassica oleracea Bo4g083590 N
Bra035427 Brassica rapa Bra035427 N
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N
Carubv10022415m.g Capsella rubella Carubv10022415m.g N
Ca_17636 Cicer arietinum Ca_17636 N
Cla001927 Citrullus lanatus Cla001927 N
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N
Cucsa.183410 Cucumis sativus Cucsa.183410 N
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N
GLYMA07G40270 Glycine max GLYMA07G40270 N
GLYMA12G28550 Glycine max GLYMA12G28550 N
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N
MLOC_64596 Hordeum vulgare MLOC_64596 I
LPERR02G16580 Leersia perrieri LPERR02G16580 N
Lus10024455.g Linum usitatissimum Lus10024455.g N
Lus10007440.g Linum usitatissimum Lus10007440.g N
cassava11453.m1 Manihot esculenta cassava11453.m1 N
cassava11454.m1 Manihot esculenta cassava11454.m1 N
cassava11455.m1 Manihot esculenta cassava11455.m1 N
cassava11456.m1 Manihot esculenta cassava11456.m1 N
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N
MTR_8g027440 Medicago truncatula MTR_8g027440 N
mgf006427m Mimulus guttatus mgf006427m N
GSMUA_Achr2G19760_001 Musa acuminata GSMUA_Achr2G19760_001 N
OBART02G20600 Oryza barthii OBART02G20600 N
OB02G28170 Oryza brachyantha OB02G28170 I
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N
BGIOSGA008429 Oryza indica BGIOSGA008429 N
OLONG_012362 Oryza longistaminata OLONG_012362 N
OMERI02G20310 Oryza meridionalis OMERI02G20310 N
ONIVA02G22590 Oryza nivara ONIVA02G22590 N
OPUNC02G18520 Oryza punctata OPUNC02G18520 N
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N
ARF7 Oryza sativa OS02G0557200 N
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N
29742.m001397 Ricinus communis 29742.m001397 N
29609.m000587 Ricinus communis 29609.m000587 N
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I
Sb04g022830 Sorghum bicolor Sb04g022830 N
TCM_027113 Theobroma cacao TCM_027113 I
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N
TRIUR3_33501 Triticum urartu TRIUR3_33501 N
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N