CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_01288
(
Phytophthora infestans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PITG_01288
T332055_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_01288T0
Sox
404
468
LPRPINPFIVYCQMQKEALGKTRRSASETRKIMGDMWRKCTEEEKEYYSQLTEVENEKRRRDHIL
Links
Other
Sox
family TFs
Other
Phytophthora infestans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.3__2039__AT3G18380.2
Arabidopsis lyrata
fgenesh2_kg.3__2039__AT3G18380.2
N
AT3G18380
Arabidopsis thaliana
AT3G18380
N
Bostr.19424s0824
Boechera stricta
Bostr.19424s0824
N
Bo1g117640
Brassica oleracea
Bo1g117640
N
Bo5g118650
Brassica oleracea
Bo5g118650
N
Bra022316
Brassica rapa
Bra022316
N
Bra037587
Brassica rapa
Bra037587
N
CBG05223
Caenorhabditis briggsae
CBG05223
N
PK03811.1
Cannabis sativa
PK03811.1
N
Cagra.1681s0007
Capsella grandiflora
Cagra.1681s0007
N
Carubv10014092m.g
Capsella rubella
Carubv10014092m.g
N
evm.TU.supercontig_80.16
Carica papaya
evm.TU.supercontig_80.16
N
orange1.1g016887m.g
Citrus sinensis
orange1.1g016887m.g
N
Cucsa.032420
Cucumis sativus
Cucsa.032420
N
GLYMA12G18490
Glycine max
GLYMA12G18490
N
Gorai.013G172000
Gossypium raimondii
Gorai.013G172000
N
Gorai.002G065900
Gossypium raimondii
Gorai.002G065900
N
mgf014854m
Mimulus guttatus
mgf014854m
N
GSMUA_Achr4G18450_001
Musa acuminata
GSMUA_Achr4G18450_001
N
Ogr09559
Ophisaurus gracilis
Ogr09559
N
POPTR_0174s00240
Populus trichocarpa
POPTR_0174s00240
N
POPTR_0011s09970
Populus trichocarpa
POPTR_0011s09970
N
Pm011344
Prunus mume
Pm011344
N
30209.m001510
Ricinus communis
30209.m001510
N
SapurV1A.0083s0320
Salix purpurea
SapurV1A.0083s0320
N
TCM_046875
Theobroma cacao
TCM_046875
N
TRIUR3_26093
Triticum urartu
TRIUR3_26093
N
GRMZM2G111204
Zea mays
GRMZM2G111204
N