CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCLCIDRAFT_59496
(
Scleroderma citrinum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCLCIDRAFT_59496
T332489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM60014
Sox
1
40
DLSKTISQQWKALSPEERLYWEGLAKEKKKEHEQMYPNYV
Links
Other
Sox
family TFs
Other
Scleroderma citrinum
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000771
Aedes aegypti
AAEL000771
N
0.531
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.447
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.505
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.441
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.425
AALB009772
Anopheles albimanus
AALB009772
N
0.531
AALB009867
Anopheles albimanus
AALB009867
N
0.503
AARA000825
Anopheles arabiensis
AARA000825
N
0.429
AATE015714
Anopheles atroparvus
AATE015714
N
0.525
AATE016483
Anopheles atroparvus
AATE016483
N
0.447
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.496
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.531
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.441
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.496
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.531
ADIR005631
Anopheles dirus
ADIR005631
N
0.496
ADIR009661
Anopheles dirus
ADIR009661
N
0.525
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.496
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.443
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.531
AFUN006689
Anopheles funestus
AFUN006689
N
0.441
AFUN009317
Anopheles funestus
AFUN009317
N
0.525
AFUN010198
Anopheles funestus
AFUN010198
N
0.496
AGAP028091
Anopheles gambiae
AGAP028091
N
0.525
AMAM004028
Anopheles maculatus
AMAM004028
N
0.441
AMAM023617
Anopheles maculatus
AMAM023617
N
0.525
AMEC007393
Anopheles melas
AMEC007393
N
0.441
AMEC011653
Anopheles melas
AMEC011653
N
0.531
AMEM002834
Anopheles merus
AMEM002834
N
0.531
AMEM007694
Anopheles merus
AMEM007694
N
0.572
AMIN001220
Anopheles minimus
AMIN001220
N
0.441
AMIN009302
Anopheles minimus
AMIN009302
N
0.496
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.496
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.531
ASIS001889
Anopheles sinensis
ASIS001889
N
0.531
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.531
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.496
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.447
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.608
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
0.455
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.496
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.505
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.499
ACEP25851
Atta cephalotes
ACEP25851
N
0.533
67303
Aureococcus anophagefferens
67303
N
0.435
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.516
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.496
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.494
yakG000714
Bos grunniens
yakG000714
N
0.452
BOTBODRAFT_575781
Botryobasidium botryosum
BOTBODRAFT_575781
N
0.483
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
0.481
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.462
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.493
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.431
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.483
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.447
CaO19.1731
Candida albicans
CaO19.1731
N
0.481
CaO19.9299
Candida albicans
CaO19.9299
N
0.481
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.447
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.490
CLEC006960
Cimex lectularius
CLEC006960
N
0.496
Cla016375
Citrullus lanatus
Cla016375
N
0.420
CC1G_05598
Coprinopsis cinerea
CC1G_05598
N
0.479
CC1G_07924
Coprinopsis cinerea
CC1G_07924
N
0.443
CNM02020
Cryptococcus neoformans
CNM02020
N
0.551
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.496
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.525
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.441
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.496
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.525
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.441
H072_9933
Dactylellina haptotyla
H072_9933
N
0.462
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.456
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.496
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.477
YQE_03817
Dendroctonus ponderosae
YQE_03817
N
0.447
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.569
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.525
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.435
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.422
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
0.462
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.441
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.447
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.441
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.463
UCREL1_237
Eutypa lata
UCREL1_237
N
0.525
UCREL1_469
Eutypa lata
UCREL1_469
N
0.420
UCREL1_749
Eutypa lata
UCREL1_749
N
0.486
SOX8
Felis catus
ENSFCAG00000004219
N
0.447
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.441
SOX2
Felis catus
ENSFCAG00000029205
I
0.579
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.483
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.741
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.459
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.522
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.418
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.439
GYMLUDRAFT_143012
Gymnopus luxurians
GYMLUDRAFT_143012
N
0.415
GYMLUDRAFT_48652
Gymnopus luxurians
GYMLUDRAFT_48652
N
0.465
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.443
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.533
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.508
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.562
HMEL013676
Heliconius melpomene
HMEL013676
N
0.459
HelroG68905
Helobdella robusta
HelroG68905
N
0.483
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.483
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.439
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.422
ISCW001638
Ixodes scapularis
ISCW001638
N
0.447
JAAARDRAFT_697179
Jaapia argillacea
JAAARDRAFT_697179
N
0.439
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.735
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.735
LACBIDRAFT_333050
Laccaria bicolor
LACBIDRAFT_333050
N
0.495
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.425
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.416
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.496
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.447
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.447
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.450
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.441
MESCA006364
Megaselia scalaris
MESCA006364
N
0.565
MESCA012239
Megaselia scalaris
MESCA012239
I
0.518
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.505
Minc18937
Meloidogyne incognita
Minc18937
N
0.422
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.447
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.537
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.422
Sox17
Mus musculus
ENSMUSG00000025902
D
0.498
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.429
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.422
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.441
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.422
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.431
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.447
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.483
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.493
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.493
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.582
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.503
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.490
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.447
PHUM433280
Pediculus humanus
PHUM433280
N
0.536
PDIP_33190
Penicillium digitatum
PDIP_33190
N
0.431
PEX1_064750
Penicillium expansum
PEX1_064750
N
0.431
PFICI_02946
Pestalotiopsis fici
PFICI_02946
N
0.432
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.493
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.476
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.515
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.460
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.717
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
0.475
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.518
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.518
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.498
POSPLDRAFT_103238
Postia placenta
POSPLDRAFT_103238
N
0.442
PPA11045
Pristionchus pacificus
PPA11045
N
0.462
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.579
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.496
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.439
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.476
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
0.523
PTTG_00444
Puccinia triticina
PTTG_00444
N
0.456
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.535
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.469
GLOINDRAFT_31865
Rhizophagus irregularis
GLOINDRAFT_31865
N
0.419
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
0.480
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.441
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.530
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.530
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.574
RPRC013413
Rhodnius prolixus
RPRC013413
N
0.434
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.462
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.441
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.476
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.477
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
0.417
SINV16572
Solenopsis invicta
SINV16572
N
0.533
SINV19749
Solenopsis invicta
SINV19749
N
0.496
SOX17
Sorex araneus
ENSSARG00000009573
I
0.498
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.474
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.430
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.430
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.492
L898_g4879
Steinernema monticolum
L898_g4879
N
0.448
SMAR007058
Strigamia maritima
SMAR007058
N
0.441
SMAR010125
Strigamia maritima
SMAR010125
N
0.540
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.448
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.447
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.516
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.456
TC009856
Tribolium castaneum
TC009856
N
0.525
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.433
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.463
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.495
TVAG_468590
Trichomonas vaginalis
TVAG_468590
N
0.415
D918_08317
Trichuris suis
D918_08317
N
0.421
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.441
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.507
VDBG_04936
Verticillium albo atrum
VDBG_04936
N
0.511
VDBG_04936
Verticillium alfalfae
VDBG_04936
N
0.511
WALSEDRAFT_27096
Wallemia sebi
WALSEDRAFT_27096
N
0.415
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.539
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.539
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.557
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.496