Thaps12024 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps12024 T332910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps12024 Sox 23 48
Thaps12024 Sox 99 156

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.427
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.493
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.421
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.441
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.438
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.422
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.433
MAM_05902 Metarhizium album MAM_05902 N 0.435
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.469
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.509
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.488
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.447
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.451
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.494
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.422
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.470
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.446
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.516
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.436
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.436
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.436
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.420
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.430
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.437
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.420