Thaps22372 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps22372 T332915_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps22372 Sox 84 114
Thaps22372 Sox 110 170

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.473
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.433
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.419
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.464
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.469
Phatr3_J49506 Phaeodactylum tricornutum Phatr3_J49506 N 0.419
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.474
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.463
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.587
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.437
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.447
Thaps24954 Thalassiosira pseudonana Thaps24954 N 0.587
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.576
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.576
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.415
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.564
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.424