SMU15002907 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15002907 T334996_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15002907 Sox 8 78
SMU15002907 Sox 95 161

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.484
AAEL011380 Aedes aegypti AAEL011380 N 0.492
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.442
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.421
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N
AALB006743 Anopheles albimanus AALB006743 N 0.492
AARA010318 Anopheles arabiensis AARA010318 N 0.492
AATE018776 Anopheles atroparvus AATE018776 N 0.492
ACUA021022 Anopheles culicifacies ACUA021022 N 0.492
ADAC001494 Anopheles darlingi ADAC001494 N 0.492
ADIR011701 Anopheles dirus ADIR011701 N 0.492
AEPI002924 Anopheles epiroticus AEPI002924 N 0.492
AFAF003948 Anopheles farauti AFAF003948 N 0.492
AFUN010134 Anopheles funestus AFUN010134 N 0.492
AGAP000005 Anopheles gambiae AGAP000005 N 0.492
AMAM015540 Anopheles maculatus AMAM015540 N 0.492
AMEC021909 Anopheles melas AMEC021909 N 0.492
AMEM017336 Anopheles merus AMEM017336 N 0.492
AMIN005344 Anopheles minimus AMIN005344 N 0.492
ASIS000124 Anopheles sinensis ASIS000124 N 0.492
ASU_03902 Ascaris suum ASU_03902 N
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N
ACEP16613 Atta cephalotes ACEP16613 N 0.475
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.435
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.415
Bm4180 Brugia malayi Bm4180 N
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N
CBN17977 Caenorhabditis brenneri CBN17977 N
CBG17468 Caenorhabditis briggsae CBG17468 N
hmg-1.2 Caenorhabditis elegans WBGene00001972 N
CJA09678 Caenorhabditis japonica CJA09678 N
CJA42049 Caenorhabditis japonica CJA42049 N
CRE02943 Caenorhabditis remanei CRE02943 N
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.434
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.422
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.429
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.475
CapteG158220 Capitella teleta CapteG158220 N 0.458
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.429
csin110255 Clonorchis sinensis csin110255 N 0.417
CGI_10023724 Crassostrea gigas CGI_10023724 N
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.503
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.503
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.449
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.422
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.432
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.481
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.419
GF19115 Drosophila ananassae FBgn0096126 N 0.475
GG17955 Drosophila erecta FBgn0110175 N 0.475
GH12282 Drosophila grimshawi FBgn0119761 N 0.475
Dsp1 Drosophila melanogaster FBgn0011764 N 0.475
GI10980 Drosophila mojavensis FBgn0133743 N 0.475
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.475
GD17278 Drosophila simulans FBgn0188840 N 0.475
GJ19445 Drosophila virilis FBgn0206588 N 0.475
GK25058 Drosophila willistoni FBgn0227017 N 0.475
GE17263 Drosophila yakuba FBgn0234741 N 0.475
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.495
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.511
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N
D915_00818 Fasciola hepatica D915_00818 N 0.538
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.421
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.475
HMEL007340 Heliconius melpomene HMEL007340 N 0.452
HelroG157726 Helobdella robusta HelroG157726 N
HelroG157878 Helobdella robusta HelroG157878 N 0.451
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.419
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.495
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.450
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.450
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.450
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
ISCW017350 Ixodes scapularis ISCW017350 N 0.431
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.443
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N
LOAG_04936 Loa loa LOAG_04936 N
LCUP007363 Lucilia cuprina LCUP007363 N 0.475
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N
Minc01077 Meloidogyne incognita Minc01077 N
Minc03268 Meloidogyne incognita Minc03268 N
Minc08988 Meloidogyne incognita Minc08988 N
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.508
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.429
NV15664 Nasonia vitripennis NV15664 N 0.475
NECAME_09126 Necator americanus NECAME_09126 N 0.421
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.421
WBGene00245261 Onchocerca volvulus WBGene00245261 N
T265_12733 Opisthorchis viverrini T265_12733 N 0.535
T265_14643 Opisthorchis viverrini T265_14643 N 0.417
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.420
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.429
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.419
PHUM006290 Pediculus humanus PHUM006290 N 0.451
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.415
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.415
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.497
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.437
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.559
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.429
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.453
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.481
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.418
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.506
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.499
A_00070 Schistosoma haematobium A_00070 N 0.499
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.501
Smp_000980 Schistosoma mansoni Smp_000980 N 0.506
Smp_100090 Schistosoma mansoni Smp_100090 N 0.484
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.499
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.499
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.506
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.506
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.484
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.418
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.471
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N
SINV22586 Solenopsis invicta SINV22586 N 0.475
L596_g22130 Steinernema carpocapsae L596_g22130 N
L889_g13533 Steinernema feltiae L889_g13533 N
L893_g5947 Steinernema glaseri L893_g5947 N
L892_g17551 Steinernema scapterisci L892_g17551 N
SMAR013695 Strigamia maritima SMAR013695 N 0.495
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.419
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.419
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.419
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.429
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.429
SMUV_0000232601 Syphacia muris SMUV_0000232601 N
TsM_000115400 Taenia solium TsM_000115400 N 0.511
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.417
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.421
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.455
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.452
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N
TCNE_0000567001 Toxocara canis TCNE_0000567001 N
D917_01254 Trichinella nativa D917_01254 N 0.449
D917_08189 Trichinella nativa D917_08189 N
EFV53345 Trichinella spiralis EFV53345 N
EFV57410 Trichinella spiralis EFV57410 N 0.449
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N
D918_07195 Trichuris suis D918_07195 N 0.418
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.422
WUBG_12099 Wuchereria bancrofti WUBG_12099 N
AAI68534 Xenopus tropicalis AAI68534 N