OPUNC04G11660 (Oryza punctata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OPUNC04G11660 T255315_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL12
M10906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL12_01 		0.833 0.833
MADS26
M10974_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS26_01 		0.750 0.750
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.708 0.708
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.708 0.708
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC04G11660.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza punctata TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART04G13770 Oryza barthii OBART04G13770 I 0.979
LPERR04G10680 Leersia perrieri LPERR04G10680 I 0.958
OBART04G13800 Oryza barthii OBART04G13800 I 0.958
OGLUM04G13550 Oryza glumaepatula OGLUM04G13550 I 0.958
OLONG_023630 Oryza longistaminata OLONG_023630 I 0.958
OMERI04G12400 Oryza meridionalis OMERI04G12400 I 0.958
ONIVA04G12010 Oryza nivara ONIVA04G12010 I 0.958
ORUFI04G15040 Oryza rufipogon ORUFI04G15040 I 0.958
ORUFI04G15060 Oryza rufipogon ORUFI04G15060 I 0.958
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.938
F775_05799 Aegilops tauschii F775_05799 I 0.938
OB04G21020 Oryza brachyantha OB04G21020 I 0.938
OGLUM04G13520 Oryza glumaepatula OGLUM04G13520 I 0.938
OMERI04G12420 Oryza meridionalis OMERI04G12420 I 0.938
Traes_2BL_E0978B1BC Triticum aestivum Traes_2BL_E0978B1BC I 0.938
Traes_2DL_71F120931 Triticum aestivum Traes_2DL_71F120931 I 0.938
TRIUR3_02252 Triticum urartu TRIUR3_02252 I 0.938
BRADI5G11270 Brachypodium distachyon BRADI5G11270 I 0.896
Si012632m.g Setaria italica Si012632m.g I 0.896
Pavir.Gb01604 Panicum virgatum Pavir.Gb01604 I 0.896
Eucgr.F02956 Eucalyptus grandis Eucgr.F02956 I 0.875
Gorai.013G135200 Gossypium raimondii Gorai.013G135200 I 0.875
Pavir.Ga01731 Panicum virgatum Pavir.Ga01731 I 0.875
Bra016128 Brassica rapa Bra016128 I 0.854
GRMZM2G069370 Zea mays GRMZM2G069370 I 0.854
MTR_4g036050 Medicago truncatula MTR_4g036050 I 0.854
POPTR_0019s10540 Populus trichocarpa POPTR_0019s10540 I 0.854
Sb06g017660 Sorghum bicolor Sb06g017660 I 0.854
TCM_036568 Theobroma cacao TCM_036568 I 0.854
Ca_19954 Cicer arietinum Ca_19954 I 0.854
cassava6262.valid.m1 Manihot esculenta cassava6262.valid.m1 I 0.854
Ciclev10023354m.g Citrus clementina Ciclev10023354m.g I 0.854
Lus10001277.g Linum usitatissimum Lus10001277.g I 0.854
Lus10009472.g Linum usitatissimum Lus10009472.g I 0.854
AGL12 Arabidopsis thaliana AT1G71692 D 0.833
Bo2g073010 Brassica oleracea Bo2g073010 I 0.833
Bo6g113110 Brassica oleracea Bo6g113110 I 0.833
Bra007972 Brassica rapa Bra007972 I 0.833
AGL12 Arabidopsis lyrata fgenesh2_kg.2__1419__AT1G71692.1 I 0.833
GLYMA09G36590 Glycine max GLYMA09G36590 I 0.833
GLYMA12G00770 Glycine max GLYMA12G00770 I 0.833
PGSC0003DMG401018787 Solanum tuberosum PGSC0003DMG401018787 I 0.833
POPTR_0013s10190 Populus trichocarpa POPTR_0013s10190 I 0.833
Solyc11g032100.1 Solanum lycopersicum Solyc11g032100.1 I 0.833
AGL12 Vitis vinifera VIT_18s0041g02140 I 0.833
Cla012709 Citrullus lanatus Cla012709 I 0.833
cassava21127.m1 Manihot esculenta cassava21127.m1 I 0.833
Cucsa.061750 Cucumis sativus Cucsa.061750 I 0.833
mgf017448m Mimulus guttatus mgf017448m I 0.833
Cagra.2418s0012 Capsella grandiflora Cagra.2418s0012 I 0.833
Carubv10020947m.g Capsella rubella Carubv10020947m.g I 0.833
evm.TU.supercontig_21.50 Carica papaya evm.TU.supercontig_21.50 I 0.833
orange1.1g028961m.g Citrus sinensis orange1.1g028961m.g I 0.833
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.833
SapurV1A.0675s0070 Salix purpurea SapurV1A.0675s0070 I 0.833
SapurV1A.0945s0060 Salix purpurea SapurV1A.0945s0060 I 0.833
SapurV1A.3049s0010 Salix purpurea SapurV1A.3049s0010 I 0.833
BRADI3G13570 Brachypodium distachyon BRADI3G13570 I 0.812
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.812
Bostr.10273s0193 Boechera stricta Bostr.10273s0193 I 0.812
MDP0000192806 Malus domestica MDP0000192806 I 0.812
MDP0000193953 Malus domestica MDP0000193953 I 0.812
MDP0000316609 Malus domestica MDP0000316609 I 0.812
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.812
PK26896.1 Cannabis sativa PK26896.1 I 0.812
PDK_20s1302432g001 Phoenix dactylifera PDK_20s1302432g001 I 0.812
PDK_20s1439001g001 Phoenix dactylifera PDK_20s1439001g001 I 0.812
AMTR_s00071p00198970 Amborella trichopoda AMTR_s00071p00198970 I 0.792
Bo6g094120 Brassica oleracea Bo6g094120 I 0.792
Bra003919 Brassica rapa Bra003919 I 0.792
F775_26271 Aegilops tauschii F775_26271 I 0.792
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.792
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.792
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.792
OB08G11080 Oryza brachyantha OB08G11080 I 0.792
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.792
PRUPE_ppa015966mg Prunus persica PRUPE_ppa015966mg I 0.792
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.792
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.792
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.792
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.792
Pm004239 Prunus mume Pm004239 I 0.792
29907.m000663 Ricinus communis 29907.m000663 I 0.792
gene27105-v1.0-hybrid Fragaria vesca gene27105-v1.0-hybrid I 0.792
GRMZM2G117961 Zea mays GRMZM2G117961 I 0.771
Sb07g001250 Sorghum bicolor Sb07g001250 I 0.771
Si014419m.g Setaria italica Si014419m.g I 0.771
Pavir.J40795 Panicum virgatum Pavir.J40795 I 0.771
BGIOSGA027872 Oryza indica BGIOSGA027872 I 0.750
GRMZM2G105387 Zea mays GRMZM2G105387 I 0.750
OBART08G00930 Oryza barthii OBART08G00930 I 0.750
OGLUM08G00990 Oryza glumaepatula OGLUM08G00990 I 0.750
OLONG_011815 Oryza longistaminata OLONG_011815 I 0.750
ONIVA08G00920 Oryza nivara ONIVA08G00920 I 0.750
ORGLA08G0003200 Oryza glaberrima ORGLA08G0003200 I 0.750
ORUFI08G00950 Oryza rufipogon ORUFI08G00950 I 0.750
MADS26 Oryza sativa OS08G0112700 D 0.750
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I 0.750
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.729
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.729
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.729
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.729
Si038257m.g Setaria italica Si038257m.g I 0.729
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.729
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.729
Pavir.J10823 Panicum virgatum Pavir.J10823 I 0.729
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.708
BRADI1G59250 Brachypodium distachyon BRADI1G59250 I 0.708
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I 0.708
BRADI4G40357 Brachypodium distachyon BRADI4G40357 I 0.708
BRADI4G40940 Brachypodium distachyon BRADI4G40940 I 0.708
F775_08627 Aegilops tauschii F775_08627 I 0.708
GSMUA_Achr11G21460_001 Musa acuminata GSMUA_Achr11G21460_001 I 0.708
GSMUA_Achr2G04340_001 Musa acuminata GSMUA_Achr2G04340_001 I 0.708
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.708
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.708
OB03G11760 Oryza brachyantha OB03G11760 I 0.708
OBART03G01800 Oryza barthii OBART03G01800 I 0.708
OBART04G25610 Oryza barthii OBART04G25610 I 0.708
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.708
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.708
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.708
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.708
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.708
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.708
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.708
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.708
OPUNC08G19670 Oryza punctata OPUNC08G19670 I 0.708
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.708
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.708
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.708
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.708
MADS50 Oryza sativa OS03G0122600 D 0.708
MADS31 Oryza sativa OS04G0614100 I 0.708
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I 0.708
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.708
Si007187m.g Setaria italica Si007187m.g I 0.708
Si038299m.g Setaria italica Si038299m.g I 0.708
Traes_4DL_5633C0561 Triticum aestivum Traes_4DL_5633C0561 I 0.708
Q40591_TOBAC Nicotiana tabacum Q40591_TOBAC D 0.708
Q9ATE8_PETHY Petunia x hybrida Q9ATE8_PETHY D 0.708
Q9ATE9_PETHY Petunia x hybrida Q9ATE9_PETHY D 0.708
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.708
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.708
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.708
SapurV1A.0024s0570 Salix purpurea SapurV1A.0024s0570 I 0.708