SELMODRAFT_411844 (Selaginella moellendorffii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 SELMODRAFT_411844 T279532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.699 0.757
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.699 0.757
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.686 0.793
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.667 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ27664 Myb 52 98
EFJ27664 Myb 104 150
EFJ27664 Myb 156 201

Links

Other Myb/SANT family TFs
Other Selaginella moellendorffii TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.794
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.788
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.729
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.728
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.717
SELMODRAFT_75978 Selaginella moellendorffii SELMODRAFT_75978 I 0.713
29794.m003447 Ricinus communis 29794.m003447 I 0.711
Bo7g115810 Brassica oleracea Bo7g115810 I 0.710
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.707
MDP0000295807 Malus domestica MDP0000295807 I 0.705
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.704
Cagra.4093s0003 Capsella grandiflora Cagra.4093s0003 I 0.703
Carubv10004063m.g Capsella rubella Carubv10004063m.g I 0.703
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.702
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.701
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.699
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.699
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.699
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.698
TCM_047091 Theobroma cacao TCM_047091 I 0.698
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.698
MDP0000179225 Malus domestica MDP0000179225 I 0.698
Cla022565 Citrullus lanatus Cla022565 I 0.696
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.696
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.696
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.696
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.695
Bo3g171130 Brassica oleracea Bo3g171130 I 0.694
Bra034531 Brassica rapa Bra034531 I 0.694
PK22174.1 Cannabis sativa PK22174.1 I 0.694
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.692
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.692
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.690
Bra037045 Brassica rapa Bra037045 I 0.687
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.687
PK12011.1 Cannabis sativa PK12011.1 D 0.686
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.685
Cla023357 Citrullus lanatus Cla023357 I 0.684
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.684
Pm005124 Prunus mume Pm005124 I 0.683
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.682
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.679
Bo1g010040 Brassica oleracea Bo1g010040 I 0.677
Bra011376 Brassica rapa Bra011376 I 0.677
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.677
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.677
mgf008601m Mimulus guttatus mgf008601m I 0.677
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.674
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I 0.671
Carubv10000155m.g Capsella rubella Carubv10000155m.g I 0.671
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.670
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.669
Ca_14925 Cicer arietinum Ca_14925 I 0.668
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.667
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.667
Ca_01884 Cicer arietinum Ca_01884 I 0.664
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.663
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.663
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.663