AMTR_s00051p00204250 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00051p00204250 T000368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.701 0.840
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.701 0.840
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.697 0.860
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.697 0.860
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.696 0.860
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.695 0.820
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.695 0.820
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.686 0.840
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.686 0.840
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.686 0.840
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.686 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16684 AP2 51 102

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.728
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.728
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.728
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.728
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.725
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.721
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.721
MDP0000756341 Malus domestica MDP0000756341 I 0.721
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.721
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.721
OS06G0166400 Oryza sativa OS06G0166400 I 0.721
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.721
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.721
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.721
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.721
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.721
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.721
OBART06G04460 Oryza barthii OBART06G04460 I 0.721
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.721
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.718
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.718
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.718
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.718
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.718
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.718
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.718
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.718
30170.m013843 Ricinus communis 30170.m013843 I 0.718
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.717
Ca_02170 Cicer arietinum Ca_02170 I 0.717
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.716
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.716
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.716
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.715
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.715
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.715
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.713
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.713
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.713
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.710
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.709
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.709
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.709
TCM_000669 Theobroma cacao TCM_000669 I 0.709
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.709
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.709
TCM_033791 Theobroma cacao TCM_033791 I 0.708
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.708
MDP0000179962 Malus domestica MDP0000179962 I 0.708
MDP0000125673 Malus domestica MDP0000125673 I 0.708
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.708
28718.m000038 Ricinus communis 28718.m000038 I 0.707
Bra014056 Brassica rapa Bra014056 I 0.706
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.706
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.706
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.706
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.706
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.706
Cla020961 Citrullus lanatus Cla020961 I 0.706
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.705
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.705
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.705
Bra011744 Brassica rapa Bra011744 I 0.705
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.705
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.705
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.705
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.705
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.705
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.705
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.705
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.705
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.705
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.705
OS04G0648900 Oryza sativa OS04G0648900 I 0.705
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.704
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.704
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.704
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.704
Cla022937 Citrullus lanatus Cla022937 I 0.704
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.702
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.702
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.702
mgf000289m Mimulus guttatus mgf000289m I 0.701
PK15612.1 Cannabis sativa PK15612.1 I 0.701
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.701
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.701
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.701
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.701
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.700
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.700
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.700
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.700
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.700
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.699
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.699
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.698
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.698
mgf021115m Mimulus guttatus mgf021115m I 0.698
Bo8g079660 Brassica oleracea Bo8g079660 I 0.697
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.697
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.697
Bo7g063980 Brassica oleracea Bo7g063980 I 0.697
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.697
ERF010 Arabidopsis thaliana AT5G67190 D 0.697
Bra036061 Brassica rapa Bra036061 I 0.697
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.697
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.697
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.696
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.696
Bra017811 Brassica rapa Bra017811 I 0.696
Bra032173 Brassica rapa Bra032173 I 0.696
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.696
Bo4g151460 Brassica oleracea Bo4g151460 I 0.696
Bo7g118430 Brassica oleracea Bo7g118430 I 0.696
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.696
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.696
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.696
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.696
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.696
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.696
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.696
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.695
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.695
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.695
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.695
ERF011 Arabidopsis thaliana AT3G50260 D 0.695
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.695
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.695
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.693
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.693
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.693
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.693
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.692
mgf006561m Mimulus guttatus mgf006561m I 0.692
Bo9g020380 Brassica oleracea Bo9g020380 I 0.691
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.691
Bra037124 Brassica rapa Bra037124 I 0.691
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.691
Cla014175 Citrullus lanatus Cla014175 I 0.691
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.689
Cla020550 Citrullus lanatus Cla020550 I 0.689
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.689
mgf025363m Mimulus guttatus mgf025363m I 0.688
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.687
ERF008 Arabidopsis thaliana AT2G23340 D 0.686
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.686
Bo1g004940 Brassica oleracea Bo1g004940 I 0.686
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.685
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.683
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.680
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.679
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.679