fgenesh1_pm.C_scaffold_2001935 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh1_pm.C_scaffold_2001935 T001629_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_2001935 AP2 116 167

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.879
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.879
ERF084 Arabidopsis thaliana AT1G80580 N 0.879
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.879
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.843
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.843
mgf023662m Mimulus guttatus mgf023662m I 0.837
Ca_20041 Cicer arietinum Ca_20041 I 0.837
Cla015583 Citrullus lanatus Cla015583 I 0.837
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.837
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.837
Bra008460 Brassica rapa Bra008460 N 0.837
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.837
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.837
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.837
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.837
MDP0000264187 Malus domestica MDP0000264187 I 0.836
Pm013734 Prunus mume Pm013734 I 0.836
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.836
TCM_027348 Theobroma cacao TCM_027348 I 0.831
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.830
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.830
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.830
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.830
27446.m000475 Ricinus communis 27446.m000475 I 0.830
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.830
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.830
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.829
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.828
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.824
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.823
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.817
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.817
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.816
Bo2g095830 Brassica oleracea Bo2g095830 N 0.796
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.795
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.795
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.786
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.786
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.786
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.783
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.781
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.776
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.768
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.768
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.753
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.749
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.742
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.738
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.705
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.704
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.697
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.687
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.687
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.687
OS05G0316800 Oryza sativa OS05G0316800 N 0.687
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.687
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.685
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.681
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.681
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.681
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.680