Gorai.009G125700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G125700 T008646_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G125700.1 AP2 144 195

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.862
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.851
mgf023662m Mimulus guttatus mgf023662m I 0.851
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.851
Cla015583 Citrullus lanatus Cla015583 I 0.850
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.850
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.848
TCM_027348 Theobroma cacao TCM_027348 I 0.845
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.842
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.842
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.842
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.842
Ca_20041 Cicer arietinum Ca_20041 I 0.842
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.841
MDP0000264187 Malus domestica MDP0000264187 I 0.839
Pm013734 Prunus mume Pm013734 I 0.839
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.837
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.837
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.837
27446.m000475 Ricinus communis 27446.m000475 I 0.837
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.834
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.832
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.832
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.832
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.831
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.830
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.817
ERF084 Arabidopsis thaliana AT1G80580 N 0.817
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.817
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.817
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.817
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.813
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.813
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.812
Bra008460 Brassica rapa Bra008460 N 0.807
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.804
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.797
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.797
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.795
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.787
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.787
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.786
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.782
Bo2g095830 Brassica oleracea Bo2g095830 N 0.763
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.759
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.753
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.746
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.742
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.735
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.728
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.724
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.711
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.706
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.701
OS05G0316800 Oryza sativa OS05G0316800 N 0.700
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.700
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.700
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.700
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.700
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.697
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.696
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.696
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I 0.693
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I 0.693
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.690
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.690
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.688
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.688
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.687
Ca_20544 Cicer arietinum Ca_20544 I 0.686
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.686
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.686
Ca_22534 Cicer arietinum Ca_22534 I 0.685
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.685
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.685
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.685
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.685
Si008428m.g Setaria italica Si008428m.g I 0.685
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.684
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.684
Cla020000 Citrullus lanatus Cla020000 I 0.684
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.684
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.683
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.682
Ca_11261 Cicer arietinum Ca_11261 I 0.682
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.682
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.682
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.682
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.682
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.682
30190.m011321 Ricinus communis 30190.m011321 I 0.682
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.682
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.682
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.682
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.682
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.682
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.682
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.681
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.681
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.681
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.681
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.681
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.681
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.681
27904.m000217 Ricinus communis 27904.m000217 I 0.681
TCM_031608 Theobroma cacao TCM_031608 I 0.681
OS01G0797600 Oryza sativa OS01G0797600 I 0.680
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.680
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.680
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.680
VIT_12s0028g03270 Vitis vinifera VIT_12s0028g03270 I 0.680
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.680
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.680
OB01G42720 Oryza brachyantha OB01G42720 I 0.680
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.680
OBART01G33870 Oryza barthii OBART01G33870 I 0.680
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.680
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.680
Si002729m.g Setaria italica Si002729m.g I 0.680
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.680
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.680
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.680
OBART05G21580 Oryza barthii OBART05G21580 I 0.679
ORUFI05G22850 Oryza rufipogon ORUFI05G22850 I 0.679
BGIOSGA017796 Oryza indica BGIOSGA017796 I 0.679
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.679
OGLUM05G22790 Oryza glumaepatula OGLUM05G22790 I 0.679
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.679
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.679
ONIVA05G22270 Oryza nivara ONIVA05G22270 I 0.679
OPUNC05G19230 Oryza punctata OPUNC05G19230 I 0.679
ORGLA05G0187600 Oryza glaberrima ORGLA05G0187600 I 0.679
Si023088m.g Setaria italica Si023088m.g I 0.679
OS05G0497300 Oryza sativa OS05G0497300 I 0.679
OMERI05G19490 Oryza meridionalis OMERI05G19490 I 0.679
mgf019214m Mimulus guttatus mgf019214m I 0.679
LPERR05G17480 Leersia perrieri LPERR05G17480 I 0.679
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.679
Gorai.010G256600 Gossypium raimondii Gorai.010G256600 I 0.679
Pavir.J14354 Panicum virgatum Pavir.J14354 I 0.678
Bra001784 Brassica rapa Bra001784 I 0.678
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.678
Bo3g074840 Brassica oleracea Bo3g074840 I 0.678
Bra015266 Brassica rapa Bra015266 I 0.678
Gorai.011G029800 Gossypium raimondii Gorai.011G029800 I 0.678
BRADI2G21060 Brachypodium distachyon BRADI2G21060 I 0.677
Sb04g035160 Sorghum bicolor Sb04g035160 I 0.677
MLOC_73358 Hordeum vulgare MLOC_73358 I 0.677
Pavir.Ca01358 Panicum virgatum Pavir.Ca01358 I 0.677