Solyc01g095500.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc01g095500.2 T005408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.707 0.780
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.685 0.740
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.679 0.700
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g095500.2.1 AP2 95 146

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.835
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.770
Ca_05803 Cicer arietinum Ca_05803 I 0.749
mgf008137m Mimulus guttatus mgf008137m I 0.724
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.724
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.724
Bra008460 Brassica rapa Bra008460 N 0.721
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.717
Cla004291 Citrullus lanatus Cla004291 I 0.716
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.716
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.714
MDP0000264187 Malus domestica MDP0000264187 I 0.714
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.714
MTR_8g099215 Medicago truncatula MTR_8g099215 I 0.714
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.714
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.714
Pm013734 Prunus mume Pm013734 I 0.714
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.713
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.712
CRF1 Arabidopsis thaliana AT4G11140 I 0.712
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.712
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.711
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.711
mgf023662m Mimulus guttatus mgf023662m I 0.711
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.711
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.711
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.711
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.711
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.710
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.710
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.710
27446.m000475 Ricinus communis 27446.m000475 I 0.710
Cla015583 Citrullus lanatus Cla015583 I 0.710
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.710
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.710
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.710
POPTR_0003s13610 Populus trichocarpa POPTR_0003s13610 I 0.710
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.710
Bo3g045150 Brassica oleracea Bo3g045150 I 0.710
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.710
SapurV1A.0237s0040 Salix purpurea SapurV1A.0237s0040 I 0.710
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.709
TCM_027348 Theobroma cacao TCM_027348 I 0.709
Gorai.007G105600 Gossypium raimondii Gorai.007G105600 I 0.709
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.709
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.709
Ca_20041 Cicer arietinum Ca_20041 I 0.708
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.708
OS05G0316800 Oryza sativa OS05G0316800 N 0.708
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.708
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.708
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.708
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.708
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.708
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.708
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.707
CRF2 Arabidopsis thaliana AT4G23750 D 0.707
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.707
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.707
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.707
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.706
MDP0000854039 Malus domestica MDP0000854039 I 0.706
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.706
PK28823.1 Cannabis sativa PK28823.1 I 0.706
mgf018116m Mimulus guttatus mgf018116m I 0.706
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.706
MDP0000308379 Malus domestica MDP0000308379 I 0.706
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.705
Pm024096 Prunus mume Pm024096 I 0.705
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.705
orange1.1g036154m.g Citrus sinensis orange1.1g036154m.g I 0.705
PGSC0003DMG400012305 Solanum tuberosum PGSC0003DMG400012305 I 0.705
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.705
Ciclev10021073m.g Citrus clementina Ciclev10021073m.g I 0.705
cassava12291.valid.m1 Manihot esculenta cassava12291.valid.m1 I 0.705
PK16787.1 Cannabis sativa PK16787.1 I 0.705
Cucsa.303720 Cucumis sativus Cucsa.303720 I 0.705
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.705
cassava39307.m1 Manihot esculenta cassava39307.m1 I 0.705
Cla011573 Citrullus lanatus Cla011573 I 0.705
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.705
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.705
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.705
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.705
Solyc08g081960.1 Solanum lycopersicum Solyc08g081960.1 I 0.705
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.705
Gorai.004G135700 Gossypium raimondii Gorai.004G135700 I 0.705
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.705
PRUPE_ppa025804mg Prunus persica PRUPE_ppa025804mg I 0.705
TCM_015336 Theobroma cacao TCM_015336 I 0.705
TCM_016396 Theobroma cacao TCM_016396 I 0.705
GLYMA05G37120 Glycine max GLYMA05G37120 I 0.705
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.705
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.705
Gorai.008G252300 Gossypium raimondii Gorai.008G252300 I 0.705
POPTR_0001s10300 Populus trichocarpa POPTR_0001s10300 I 0.705
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.705
evm.TU.supercontig_122.27 Carica papaya evm.TU.supercontig_122.27 I 0.703
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.703
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.703
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.703
mgf023807m Mimulus guttatus mgf023807m I 0.703
Bra029079 Brassica rapa Bra029079 I 0.702
30190.m010791 Ricinus communis 30190.m010791 I 0.702
Bo3g022760 Brassica oleracea Bo3g022760 I 0.702
MDP0000229285 Malus domestica MDP0000229285 I 0.701
MDP0000783818 Malus domestica MDP0000783818 I 0.701
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.700
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.700
30169.m006542 Ricinus communis 30169.m006542 I 0.700
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.700
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.699
Cla011108 Citrullus lanatus Cla011108 I 0.699
TCM_005203 Theobroma cacao TCM_005203 I 0.699
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.699
Gorai.007G105700 Gossypium raimondii Gorai.007G105700 I 0.699
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.699
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.698
SapurV1A.0013s0740 Salix purpurea SapurV1A.0013s0740 I 0.698
POPTR_0014s09020 Populus trichocarpa POPTR_0014s09020 I 0.698
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.696
GLYMA16G08683 Glycine max GLYMA16G08683 I 0.696
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.696
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.696
28641.m000082 Ricinus communis 28641.m000082 I 0.696
Lus10039324.g Linum usitatissimum Lus10039324.g I 0.695
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.695
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.695
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.695
Ca_03948 Cicer arietinum Ca_03948 I 0.695
Lus10027573.g Linum usitatissimum Lus10027573.g I 0.695
Pm019793 Prunus mume Pm019793 I 0.694
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.694
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.694
Gorai.001G156900 Gossypium raimondii Gorai.001G156900 I 0.693
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.693
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.693
28049.m000300 Ricinus communis 28049.m000300 I 0.692
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.691
GLYMA11G31401 Glycine max GLYMA11G31401 I 0.691
GLYMA19G44240 Glycine max GLYMA19G44240 I 0.691
Thhalv10026857m.g Eutrema salsugineum Thhalv10026857m.g I 0.690
Gorai.009G355700 Gossypium raimondii Gorai.009G355700 I 0.689
POPTR_0002s16900 Populus trichocarpa POPTR_0002s16900 I 0.689
Gorai.006G208200 Gossypium raimondii Gorai.006G208200 I 0.689
Thhalv10001561m.g Eutrema salsugineum Thhalv10001561m.g I 0.689
TCM_032408 Theobroma cacao TCM_032408 I 0.689
Bra013730 Brassica rapa Bra013730 I 0.688
Bo7g109100 Brassica oleracea Bo7g109100 I 0.688
Gorai.003G082200 Gossypium raimondii Gorai.003G082200 I 0.688
evm.TU.supercontig_194.13 Carica papaya evm.TU.supercontig_194.13 I 0.688
Bo1g037170 Brassica oleracea Bo1g037170 I 0.688
Bra019270 Brassica rapa Bra019270 I 0.688
mgf022434m Mimulus guttatus mgf022434m I 0.688
GLYMA03G41640 Glycine max GLYMA03G41640 I 0.687
gene18922-v1.0-hybrid Fragaria vesca gene18922-v1.0-hybrid I 0.686
Cagra.0084s0074 Capsella grandiflora Cagra.0084s0074 I 0.685
Carubv10026682m.g Capsella rubella Carubv10026682m.g I 0.685
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.685
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.685
ERF084 Arabidopsis thaliana AT1G80580 N 0.685
Bostr.26833s0952 Boechera stricta Bostr.26833s0952 I 0.685
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.685
CRF3 Arabidopsis lyrata scaffold_801806.1 I 0.685
CRF3 Arabidopsis thaliana AT5G53290 D 0.685
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.685
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.685
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.685
evm.TU.supercontig_3.43 Carica papaya evm.TU.supercontig_3.43 I 0.684
Bra003068 Brassica rapa Bra003068 I 0.684
TCM_042300 Theobroma cacao TCM_042300 I 0.684
Thhalv10013898m.g Eutrema salsugineum Thhalv10013898m.g I 0.684
Bo9g111050 Brassica oleracea Bo9g111050 I 0.684
Bo2g045930 Brassica oleracea Bo2g045930 I 0.684
Bra022643 Brassica rapa Bra022643 I 0.684
Cla013632 Citrullus lanatus Cla013632 I 0.683
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.681
SapurV1A.0099s0060 Salix purpurea SapurV1A.0099s0060 I 0.681
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.681
Eucgr.E00834 Eucalyptus grandis Eucgr.E00834 I 0.680
GSMUA_Achr8G33590_001 Musa acuminata GSMUA_Achr8G33590_001 I 0.679
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.679
SapurV1A.0035s0790 Salix purpurea SapurV1A.0035s0790 I 0.679
Bostr.7867s0626 Boechera stricta Bostr.7867s0626 I 0.679
O65242_TOBAC Nicotiana tabacum O65242_TOBAC D 0.679
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.678
Ca_15671 Cicer arietinum Ca_15671 I 0.677