GLYMA18G48741 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA18G48741 T002030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC

GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.720 0.735
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.695 0.776
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.695 0.776
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.695 0.776
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.689 0.755
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.689 0.755
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.689 0.755
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.689 0.755
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.689 0.755
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.679 0.673
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.679 0.673
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.679 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G48741.1 AP2 65 117

Links

Other AP2 family TFs
Other Glycine max TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_06034 Cicer arietinum Ca_06034 I 0.783
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.782
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.775
Ca_06032 Cicer arietinum Ca_06032 I 0.775
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.775
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.755
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.743
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.740
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.740
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.739
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.734
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.731
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.726
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.726
Ca_12080 Cicer arietinum Ca_12080 I 0.724
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.721
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.721
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.720
ERF098 Arabidopsis thaliana AT3G23230 D 0.720
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.720
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.720
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.717
Cla021851 Citrullus lanatus Cla021851 I 0.717
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.716
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.715
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.713
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.713
Pm017696 Prunus mume Pm017696 I 0.713
MDP0000830129 Malus domestica MDP0000830129 I 0.713
TCM_029773 Theobroma cacao TCM_029773 I 0.713
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.711
Bo9g001020 Brassica oleracea Bo9g001020 I 0.710
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.710
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.710
TCM_005707 Theobroma cacao TCM_005707 I 0.709
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.709
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.708
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.707
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.707
30174.m008756 Ricinus communis 30174.m008756 I 0.706
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.706
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.705
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.705
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.704
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.704
TCM_005706 Theobroma cacao TCM_005706 I 0.703
30174.m008755 Ricinus communis 30174.m008755 I 0.703
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.702
MDP0000930655 Malus domestica MDP0000930655 I 0.702
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.702
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.700
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.700
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.700
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.699
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.699
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.698
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.697
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.697
Pm017699 Prunus mume Pm017699 I 0.697
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.697
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.697
MTR_4g088005 Medicago truncatula MTR_4g088005 I 0.697
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.697
chr3.CM0080.190.nd Lotus japonicus chr3.CM0080.190.nd I 0.697
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.696
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I 0.696
GRMZM2G057386 Zea mays GRMZM2G057386 I 0.696
Si017790m.g Setaria italica Si017790m.g I 0.696
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I 0.696
VIT_07s0005g03190 Vitis vinifera VIT_07s0005g03190 I 0.696
OMERI02G25780 Oryza meridionalis OMERI02G25780 I 0.696
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I 0.696
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I 0.696
BGIOSGA008740 Oryza indica BGIOSGA008740 I 0.696
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I 0.696
OPUNC02G24090 Oryza punctata OPUNC02G24090 I 0.696
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.696
OBART02G26470 Oryza barthii OBART02G26470 I 0.696
ONIVA02G28840 Oryza nivara ONIVA02G28840 I 0.696
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.696
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.696
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.696
Bra004873 Brassica rapa Bra004873 I 0.695
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.695
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.695
Bra037630 Brassica rapa Bra037630 I 0.695
ERF13 Arabidopsis thaliana AT2G44840 D 0.695
Bo4g195220 Brassica oleracea Bo4g195220 I 0.695
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.695
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.695
Bo4g024140 Brassica oleracea Bo4g024140 I 0.695
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.695
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.694
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.694
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.694
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.694
Eucgr.H03091 Eucalyptus grandis Eucgr.H03091 I 0.693
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.693
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.693
Pm020605 Prunus mume Pm020605 I 0.693
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.693
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.693
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.693
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.693
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.690
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.690
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.690
OS04G0257500 Oryza sativa OS04G0257500 I 0.689
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.689
OB04G14270 Oryza brachyantha OB04G14270 I 0.689
OBART04G05450 Oryza barthii OBART04G05450 I 0.689
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.689
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.689
ERF1 Arabidopsis lyrata scaffold_302806.1 I 0.689
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.689
Bo1g102210 Brassica oleracea Bo1g102210 I 0.689
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I 0.689
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.689
Carubv10014553m.g Capsella rubella Carubv10014553m.g I 0.689
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.689
ERF1B Arabidopsis thaliana AT3G23240 D 0.689
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.689
Bra023745 Brassica rapa Bra023745 I 0.689
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.689
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.689
Bra023746 Brassica rapa Bra023746 I 0.689
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.689
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.688
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I 0.688
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.688
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.688
POPTR_0008s16600 Populus trichocarpa POPTR_0008s16600 I 0.687
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.687
GLYMA03G26394 Glycine max GLYMA03G26394 I 0.687
TCM_020870 Theobroma cacao TCM_020870 I 0.687
Bo7g040810 Brassica oleracea Bo7g040810 I 0.687
Bra014925 Brassica rapa Bra014925 I 0.687
mgf021973m Mimulus guttatus mgf021973m I 0.686
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I 0.686
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I 0.686
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.686
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.686
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.686
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.685
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.685
GLYMA13G18330 Glycine max GLYMA13G18330 I 0.685
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.685
GLYMA10G04160 Glycine max GLYMA10G04160 I 0.685
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.684
Lus10021196.g Linum usitatissimum Lus10021196.g I 0.684
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.684
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.684
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I 0.684
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I 0.684
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.683
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.683
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.683
GLYMA03G26480 Glycine max GLYMA03G26480 I 0.683
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.682
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.682
TCM_004062 Theobroma cacao TCM_004062 I 0.682
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.682
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.682
Cla021852 Citrullus lanatus Cla021852 I 0.682
mgf021215m Mimulus guttatus mgf021215m I 0.681
mgf001695m Mimulus guttatus mgf001695m I 0.681
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.681
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.680
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.680
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.680
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.680
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.680
Cla007696 Citrullus lanatus Cla007696 I 0.680
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.680
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.679
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.679
VIT_07s0005g03200 Vitis vinifera VIT_07s0005g03200 I 0.679
GRMZM2G474326 Zea mays GRMZM2G474326 I 0.679
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.679
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.679
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.679
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.679
Ca_00359 Cicer arietinum Ca_00359 I 0.679
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.679
PGSC0003DMG400010285 Solanum tuberosum PGSC0003DMG400010285 I 0.679
ERF3 Arabidopsis thaliana AT1G50640 D 0.679
Sb03g034780 Sorghum bicolor Sb03g034780 I 0.679
Pm010368 Prunus mume Pm010368 I 0.678
PGSC0003DMG400010750 Solanum tuberosum PGSC0003DMG400010750 I 0.678
29900.m001559 Ricinus communis 29900.m001559 I 0.678
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.678
TCM_005705 Theobroma cacao TCM_005705 I 0.678
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.678
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.678
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.678
Solyc03g093610.1 Solanum lycopersicum Solyc03g093610.1 I 0.678
Solyc09g066360.1 Solanum lycopersicum Solyc09g066360.1 I 0.678
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.678
Ciclev10024451m.g Citrus clementina Ciclev10024451m.g I 0.677
Bra023748 Brassica rapa Bra023748 I 0.677
Bo1g102220 Brassica oleracea Bo1g102220 I 0.677
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.677