CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC06G16400
(
Oryza punctata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OPUNC06G16400
T003775_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8LKX0_MAIZE
M09722_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.760
0.840
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.722
0.820
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.722
0.820
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA
TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.708
0.800
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.708
0.800
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.708
0.800
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.706
0.780
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.706
0.780
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC06G16400.1
AP2
49
100
PTYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDAAAARAAAM
Links
Other
AP2
family TFs
Other
Oryza punctata
TFs
258 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB06G25840
Oryza brachyantha
OB06G25840
I
0.768
GRMZM5G806839
Zea mays
GRMZM5G806839
I
0.768
OMERI06G18780
Oryza meridionalis
OMERI06G18780
I
0.765
BRADI1G38110
Brachypodium distachyon
BRADI1G38110
I
0.765
ONIVA06G21640
Oryza nivara
ONIVA06G21640
I
0.765
ORUFI06G19350
Oryza rufipogon
ORUFI06G19350
I
0.765
BRADI3G33355
Brachypodium distachyon
BRADI3G33355
I
0.761
GRMZM5G889719
Zea mays
GRMZM5G889719
I
0.760
Si039427m.g
Setaria italica
Si039427m.g
I
0.760
Q8LKX0_MAIZE
Zea mays
Q8LKX0_MAIZE
D
0.760
Sb01g029065
Sorghum bicolor
Sb01g029065
I
0.760
Pavir.Ia02208
Panicum virgatum
Pavir.Ia02208
I
0.760
MTR_7g046260
Medicago truncatula
MTR_7g046260
I
0.757
LPERR10G14320
Leersia perrieri
LPERR10G14320
I
0.754
OPUNC02G08670
Oryza punctata
OPUNC02G08670
I
0.753
ORGLA02G0087100
Oryza glaberrima
ORGLA02G0087100
I
0.753
Pavir.Ab00844
Panicum virgatum
Pavir.Ab00844
I
0.753
GRMZM2G047918
Zea mays
GRMZM2G047918
I
0.753
LPERR06G15020
Leersia perrieri
LPERR06G15020
I
0.753
OBART02G09680
Oryza barthii
OBART02G09680
I
0.753
OGLUM02G09810
Oryza glumaepatula
OGLUM02G09810
I
0.753
OMERI02G10950
Oryza meridionalis
OMERI02G10950
I
0.753
BRADI3G08790
Brachypodium distachyon
BRADI3G08790
I
0.753
ONIVA02G10590
Oryza nivara
ONIVA02G10590
I
0.753
ORUFI02G09750
Oryza rufipogon
ORUFI02G09750
I
0.753
Si018188m.g
Setaria italica
Si018188m.g
I
0.753
GRMZM2G073047
Zea mays
GRMZM2G073047
I
0.751
Si007144m.g
Setaria italica
Si007144m.g
I
0.750
GRMZM2G005301
Zea mays
GRMZM2G005301
I
0.750
F775_14820
Aegilops tauschii
F775_14820
I
0.750
Traes_7DL_538583735
Triticum aestivum
Traes_7DL_538583735
I
0.750
MLOC_17203
Hordeum vulgare
MLOC_17203
I
0.750
GLYMA01G13410
Glycine max
GLYMA01G13410
I
0.748
GSMUA_Achr10G14070_001
Musa acuminata
GSMUA_Achr10G14070_001
I
0.744
Traes_1BL_E39CD252E
Triticum aestivum
Traes_1BL_E39CD252E
I
0.744
Traes_1AL_88D49649D
Triticum aestivum
Traes_1AL_88D49649D
I
0.744
F775_11989
Aegilops tauschii
F775_11989
I
0.744
Pavir.Da00839
Panicum virgatum
Pavir.Da00839
I
0.743
Cla023465
Citrullus lanatus
Cla023465
I
0.740
OPUNC10G16830
Oryza punctata
OPUNC10G16830
I
0.738
ONIVA10G21000
Oryza nivara
ONIVA10G21000
I
0.738
ORGLA10G0136200
Oryza glaberrima
ORGLA10G0136200
I
0.738
OMERI08G00520
Oryza meridionalis
OMERI08G00520
I
0.738
OGLUM10G18570
Oryza glumaepatula
OGLUM10G18570
I
0.738
Cucsa.312570
Cucumis sativus
Cucsa.312570
I
0.737
GRMZM2G072926
Zea mays
GRMZM2G072926
I
0.734
Sb04g032940
Sorghum bicolor
Sb04g032940
I
0.734
GRMZM2G048621
Zea mays
GRMZM2G048621
I
0.734
GRMZM5G816314
Zea mays
GRMZM5G816314
I
0.734
Si017865m.g
Setaria italica
Si017865m.g
I
0.734
GRMZM2G041839
Zea mays
GRMZM2G041839
I
0.734
AC187157.4_FG001
Zea mays
AC187157.4_FG001
I
0.734
TRAES3BF073700060CFD_g
Triticum aestivum
TRAES3BF073700060CFD_g
I
0.731
Pavir.Ga01094
Panicum virgatum
Pavir.Ga01094
I
0.730
GRMZM2G028969
Zea mays
GRMZM2G028969
I
0.727
BRADI2G06180
Brachypodium distachyon
BRADI2G06180
I
0.726
GSMUA_Achr2G09430_001
Musa acuminata
GSMUA_Achr2G09430_001
I
0.725
GSMUA_Achr9G05860_001
Musa acuminata
GSMUA_Achr9G05860_001
I
0.724
Aquca_011_00566
Aquilegia coerulea
Aquca_011_00566
I
0.723
cassava19875.m1
Manihot esculenta
cassava19875.m1
I
0.722
Carubv10023699m.g
Capsella rubella
Carubv10023699m.g
I
0.722
Pavir.Eb00249
Panicum virgatum
Pavir.Eb00249
I
0.722
cassava19912.m1
Manihot esculenta
cassava19912.m1
I
0.722
Si002749m.g
Setaria italica
Si002749m.g
I
0.722
Pm017610
Prunus mume
Pm017610
I
0.722
Thhalv10001792m.g
Eutrema salsugineum
Thhalv10001792m.g
I
0.722
SapurV1A.0033s0230
Salix purpurea
SapurV1A.0033s0230
I
0.722
gene04810-v1.0-hybrid
Fragaria vesca
gene04810-v1.0-hybrid
I
0.722
Cagra.0239s0048
Capsella grandiflora
Cagra.0239s0048
I
0.722
ONIVA01G08000
Oryza nivara
ONIVA01G08000
I
0.722
Sb03g002630
Sorghum bicolor
Sb03g002630
I
0.722
TCM_005639
Theobroma cacao
TCM_005639
I
0.722
Bostr.25993s0277
Boechera stricta
Bostr.25993s0277
I
0.722
PRUPE_ppa009812mg
Prunus persica
PRUPE_ppa009812mg
I
0.722
ERF034
Arabidopsis thaliana
AT2G44940
D
0.722
fgenesh2_kg.4__2683__AT2G44940.1
Arabidopsis lyrata
fgenesh2_kg.4__2683__AT2G44940.1
I
0.722
BGIOSGA002184
Oryza indica
BGIOSGA002184
I
0.722
30174.m008790
Ricinus communis
30174.m008790
I
0.721
POPTR_0002s14210
Populus trichocarpa
POPTR_0002s14210
I
0.720
TCM_014892
Theobroma cacao
TCM_014892
I
0.720
Gorai.004G165300
Gossypium raimondii
Gorai.004G165300
I
0.719
OMERI01G06530
Oryza meridionalis
OMERI01G06530
I
0.719
ORUFI01G06970
Oryza rufipogon
ORUFI01G06970
I
0.719
OS01G0200600
Oryza sativa
OS01G0200600
I
0.719
OPUNC01G06210
Oryza punctata
OPUNC01G06210
I
0.719
ORGLA01G0061000
Oryza glaberrima
ORGLA01G0061000
I
0.719
OGLUM01G07430
Oryza glumaepatula
OGLUM01G07430
I
0.719
OBART01G06440
Oryza barthii
OBART01G06440
I
0.719
Pavir.Aa00833
Panicum virgatum
Pavir.Aa00833
I
0.718
ORUFI10G19670
Oryza rufipogon
ORUFI10G19670
I
0.718
Si019772m.g
Setaria italica
Si019772m.g
I
0.718
Cucsa.235510
Cucumis sativus
Cucsa.235510
I
0.718
Ciclev10009138m.g
Citrus clementina
Ciclev10009138m.g
I
0.718
Cla004187
Citrullus lanatus
Cla004187
I
0.718
orange1.1g041119m.g
Citrus sinensis
orange1.1g041119m.g
I
0.718
Pavir.Ab02603
Panicum virgatum
Pavir.Ab02603
I
0.718
Cucsa.121080
Cucumis sativus
Cucsa.121080
I
0.717
Bo4g195280
Brassica oleracea
Bo4g195280
I
0.716
mgf022802m
Mimulus guttatus
mgf022802m
I
0.716
Bo4g024220
Brassica oleracea
Bo4g024220
I
0.716
Bra004878
Brassica rapa
Bra004878
I
0.716
Bra040333
Brassica rapa
Bra040333
I
0.716
Gorai.004G281600
Gossypium raimondii
Gorai.004G281600
I
0.715
OB01G16440
Oryza brachyantha
OB01G16440
I
0.715
Cucsa.116550
Cucumis sativus
Cucsa.116550
I
0.714
Cla017050
Citrullus lanatus
Cla017050
I
0.714
mgf019024m
Mimulus guttatus
mgf019024m
I
0.713
GRMZM5G842961
Zea mays
GRMZM5G842961
I
0.712
Si017995m.g
Setaria italica
Si017995m.g
I
0.712
Eucgr.C03785
Eucalyptus grandis
Eucgr.C03785
I
0.712
Sb04g032960
Sorghum bicolor
Sb04g032960
I
0.712
chr4.CM0617.510.nd
Lotus japonicus
chr4.CM0617.510.nd
I
0.712
MTR_8g102800
Medicago truncatula
MTR_8g102800
I
0.711
TCM_044478
Theobroma cacao
TCM_044478
I
0.711
Gorai.010G075300
Gossypium raimondii
Gorai.010G075300
I
0.711
gene11882-v1.0-hybrid
Fragaria vesca
gene11882-v1.0-hybrid
I
0.711
Ca_05941
Cicer arietinum
Ca_05941
I
0.711
GLYMA08G03910
Glycine max
GLYMA08G03910
I
0.711
Gorai.001G008100
Gossypium raimondii
Gorai.001G008100
I
0.711
GSMUA_Achr1G04350_001
Musa acuminata
GSMUA_Achr1G04350_001
I
0.709
Gorai.009G136500
Gossypium raimondii
Gorai.009G136500
I
0.709
Si018222m.g
Setaria italica
Si018222m.g
I
0.709
Bra037041
Brassica rapa
Bra037041
I
0.708
Bo7g115860
Brassica oleracea
Bo7g115860
I
0.708
scaffold_700899.1
Arabidopsis lyrata
scaffold_700899.1
I
0.708
GLYMA05G35741
Glycine max
GLYMA05G35741
I
0.708
Cagra.4093s0009
Capsella grandiflora
Cagra.4093s0009
I
0.708
Bra034535
Brassica rapa
Bra034535
I
0.708
Carubv10006567m.g
Capsella rubella
Carubv10006567m.g
I
0.708
Eucgr.F03062
Eucalyptus grandis
Eucgr.F03062
I
0.708
ERF043
Arabidopsis thaliana
AT4G32800
D
0.708
Thhalv10026204m.g
Eutrema salsugineum
Thhalv10026204m.g
I
0.708
Bostr.7867s1130
Boechera stricta
Bostr.7867s1130
I
0.708
mgf022971m
Mimulus guttatus
mgf022971m
I
0.708
Bo3g171090
Brassica oleracea
Bo3g171090
I
0.708
Gorai.009G050200
Gossypium raimondii
Gorai.009G050200
I
0.707
30146.m003535
Ricinus communis
30146.m003535
I
0.707
TCM_028851
Theobroma cacao
TCM_028851
I
0.706
ERF035
Arabidopsis thaliana
AT3G60490
D
0.706
fgenesh2_kg.5__2513__AT3G60490.1
Arabidopsis lyrata
fgenesh2_kg.5__2513__AT3G60490.1
I
0.706
28353.m000054
Ricinus communis
28353.m000054
I
0.706
Solyc06g066540.1
Solanum lycopersicum
Solyc06g066540.1
I
0.705
Cagra.3527s0003
Capsella grandiflora
Cagra.3527s0003
I
0.704
MTR_5g012910
Medicago truncatula
MTR_5g012910
I
0.704
Carubv10017799m.g
Capsella rubella
Carubv10017799m.g
I
0.704
PGSC0003DMG400002620
Solanum tuberosum
PGSC0003DMG400002620
I
0.704
Bo3g037480
Brassica oleracea
Bo3g037480
I
0.703
Lus10002801.g
Linum usitatissimum
Lus10002801.g
I
0.703
Lus10001601.g
Linum usitatissimum
Lus10001601.g
I
0.703
Bra000366
Brassica rapa
Bra000366
I
0.703
Solyc03g120840.1
Solanum lycopersicum
Solyc03g120840.1
I
0.703
Lus10038607.g
Linum usitatissimum
Lus10038607.g
I
0.702
OB04G27840
Oryza brachyantha
OB04G27840
I
0.702
GSMUA_AchrUn_randomG24010_001
Musa acuminata
GSMUA_AchrUn_randomG24010_001
I
0.701
evm.TU.supercontig_101.39
Carica papaya
evm.TU.supercontig_101.39
I
0.701
Bostr.13158s0050
Boechera stricta
Bostr.13158s0050
I
0.701
TCM_015930
Theobroma cacao
TCM_015930
I
0.700
Gorai.004G196700
Gossypium raimondii
Gorai.004G196700
I
0.699
OPUNC02G24230
Oryza punctata
OPUNC02G24230
I
0.698
GRMZM2G172936
Zea mays
GRMZM2G172936
I
0.698
ONIVA04G19060
Oryza nivara
ONIVA04G19060
I
0.698
BGIOSGA016884
Oryza indica
BGIOSGA016884
I
0.698
BGIOSGA016883
Oryza indica
BGIOSGA016883
I
0.698
ONIVA04G19090
Oryza nivara
ONIVA04G19090
I
0.698
OPUNC04G18530
Oryza punctata
OPUNC04G18530
I
0.698
ORGLA04G0179000
Oryza glaberrima
ORGLA04G0179000
I
0.698
ORUFI04G22430
Oryza rufipogon
ORUFI04G22430
I
0.698
ORUFI04G22410
Oryza rufipogon
ORUFI04G22410
I
0.698
ORUFI02G28010
Oryza rufipogon
ORUFI02G28010
I
0.698
OS02G0657000
Oryza sativa
OS02G0657000
I
0.698
OS04G0549800
Oryza sativa
OS04G0549800
I
0.698
ONIVA02G28990
Oryza nivara
ONIVA02G28990
I
0.698
ORGLA04G0178700
Oryza glaberrima
ORGLA04G0178700
I
0.698
OS04G0550200
Oryza sativa
OS04G0550200
I
0.698
OPUNC04G18520
Oryza punctata
OPUNC04G18520
I
0.698
LPERR04G16900
Leersia perrieri
LPERR04G16900
I
0.698
OGLUM04G20760
Oryza glumaepatula
OGLUM04G20760
I
0.698
LPERR02G21590
Leersia perrieri
LPERR02G21590
I
0.698
OGLUM02G27070
Oryza glumaepatula
OGLUM02G27070
I
0.698
Pavir.Ga01093
Panicum virgatum
Pavir.Ga01093
I
0.698
OBART04G20820
Oryza barthii
OBART04G20820
I
0.698
Pavir.Gb01128
Panicum virgatum
Pavir.Gb01128
I
0.698
MLOC_3095
Hordeum vulgare
MLOC_3095
I
0.698
OGLUM04G20790
Oryza glumaepatula
OGLUM04G20790
I
0.698
Traes_6DL_3019F176A
Triticum aestivum
Traes_6DL_3019F176A
I
0.698
OMERI04G17290
Oryza meridionalis
OMERI04G17290
I
0.698
OMERI02G25910
Oryza meridionalis
OMERI02G25910
I
0.698
OMERI04G17270
Oryza meridionalis
OMERI04G17270
I
0.698
Si012254m.g
Setaria italica
Si012254m.g
I
0.698
Solyc12g008350.1
Solanum lycopersicum
Solyc12g008350.1
I
0.697
BRADI3G50630
Brachypodium distachyon
BRADI3G50630
I
0.697
PGSC0003DMG400000365
Solanum tuberosum
PGSC0003DMG400000365
I
0.697
LjT37H17.40.nd
Lotus japonicus
LjT37H17.40.nd
I
0.694
MTR_4g100650
Medicago truncatula
MTR_4g100650
I
0.694
GLYMA17G15310
Glycine max
GLYMA17G15310
I
0.694
GLYMA05G04920
Glycine max
GLYMA05G04920
I
0.694
BRADI5G17620
Brachypodium distachyon
BRADI5G17620
I
0.694
Ca_12765
Cicer arietinum
Ca_12765
I
0.694
GSMUA_Achr6G26280_001
Musa acuminata
GSMUA_Achr6G26280_001
I
0.693
cassava17387.m1
Manihot esculenta
cassava17387.m1
I
0.693
Gorai.007G087100
Gossypium raimondii
Gorai.007G087100
I
0.693
Pavir.Aa00834
Panicum virgatum
Pavir.Aa00834
I
0.690
VIT_09s0002g03940
Vitis vinifera
VIT_09s0002g03940
I
0.690
PGSC0003DMG400026461
Solanum tuberosum
PGSC0003DMG400026461
I
0.688
Solyc12g044390.1
Solanum lycopersicum
Solyc12g044390.1
I
0.688
Ciclev10006536m.g
Citrus clementina
Ciclev10006536m.g
I
0.687
VIT_00s0632g00010
Vitis vinifera
VIT_00s0632g00010
I
0.687
orange1.1g041015m.g
Citrus sinensis
orange1.1g041015m.g
I
0.687
VIT_00s0341g00070
Vitis vinifera
VIT_00s0341g00070
I
0.687
Pavir.Ab02601
Panicum virgatum
Pavir.Ab02601
I
0.686
Traes_2AL_0F08552FB
Triticum aestivum
Traes_2AL_0F08552FB
I
0.686
Traes_2BL_984787AC0
Triticum aestivum
Traes_2BL_984787AC0
I
0.686
Pavir.Aa00832
Panicum virgatum
Pavir.Aa00832
I
0.686
VIT_15s0021g02110
Vitis vinifera
VIT_15s0021g02110
I
0.686
Eucgr.E01593
Eucalyptus grandis
Eucgr.E01593
I
0.686
GLYMA03G27050
Glycine max
GLYMA03G27050
I
0.685
GLYMA07G14560
Glycine max
GLYMA07G14560
I
0.685
PK25970.1
Cannabis sativa
PK25970.1
I
0.685
Pm023417
Prunus mume
Pm023417
I
0.684
PRUPE_ppa010340mg
Prunus persica
PRUPE_ppa010340mg
I
0.684
Bra034273
Brassica rapa
Bra034273
I
0.684
Gorai.003G175100
Gossypium raimondii
Gorai.003G175100
I
0.684
evm.TU.supercontig_109.32
Carica papaya
evm.TU.supercontig_109.32
I
0.684
ERF042
Arabidopsis thaliana
AT2G25820
I
0.684
Cagra.21659s0001
Capsella grandiflora
Cagra.21659s0001
I
0.683
Carubv10024051m.g
Capsella rubella
Carubv10024051m.g
I
0.683
cassava4979.m1
Manihot esculenta
cassava4979.m1
I
0.683
Al_scaffold_0004_2818
Arabidopsis lyrata
Al_scaffold_0004_2818
I
0.682
Bra011383
Brassica rapa
Bra011383
I
0.682
Bo1g009990
Brassica oleracea
Bo1g009990
I
0.682
Al_scaffold_0006_1828
Arabidopsis lyrata
Al_scaffold_0006_1828
I
0.682
mgf024816m
Mimulus guttatus
mgf024816m
I
0.682
Bra023026
Brassica rapa
Bra023026
I
0.682
Bo3g028500
Brassica oleracea
Bo3g028500
I
0.682
cassava15622.m1
Manihot esculenta
cassava15622.m1
I
0.681
Pm013463
Prunus mume
Pm013463
I
0.681
Bostr.26326s0067
Boechera stricta
Bostr.26326s0067
I
0.681
SapurV1A.0805s0100
Salix purpurea
SapurV1A.0805s0100
I
0.680
Traes_2DL_A336122501
Triticum aestivum
Traes_2DL_A336122501
I
0.680
evm.TU.supercontig_89.73
Carica papaya
evm.TU.supercontig_89.73
I
0.680
F775_04501
Aegilops tauschii
F775_04501
I
0.680
Traes_2AL_43491B9E0
Triticum aestivum
Traes_2AL_43491B9E0
I
0.680
Traes_2BL_FC0F8A3DC
Triticum aestivum
Traes_2BL_FC0F8A3DC
I
0.680
Si012688m.g
Setaria italica
Si012688m.g
I
0.679
Sb06g024540
Sorghum bicolor
Sb06g024540
I
0.679
MTR_1g006660
Medicago truncatula
MTR_1g006660
I
0.679
Pavir.Gb01129
Panicum virgatum
Pavir.Gb01129
I
0.679
Ciclev10021740m.g
Citrus clementina
Ciclev10021740m.g
I
0.678
Bo6g077080
Brassica oleracea
Bo6g077080
I
0.678
Ca_14911
Cicer arietinum
Ca_14911
I
0.678
orange1.1g024791m.g
Citrus sinensis
orange1.1g024791m.g
I
0.678
Bra003415
Brassica rapa
Bra003415
I
0.678
POPTR_0001s18800
Populus trichocarpa
POPTR_0001s18800
I
0.678
Gorai.003G063500
Gossypium raimondii
Gorai.003G063500
I
0.677
PK01156.1
Cannabis sativa
PK01156.1
I
0.677
orange1.1g038538m.g
Citrus sinensis
orange1.1g038538m.g
I
0.677
Ciclev10027587m.g
Citrus clementina
Ciclev10027587m.g
I
0.677
OGLUM06G19330
Oryza glumaepatula
OGLUM06G19330
N
0.557