OBART02G09680 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART02G09680 T003082_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.746 0.929
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.715 0.905
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.715 0.905
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.709 0.905
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.709 0.905
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.701 0.905
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.701 0.905
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.701 0.905
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G09680.1 AP2 44 87

Links

Other AP2 family TFs
Other Oryza barthii TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I 0.762
OMERI02G10950 Oryza meridionalis OMERI02G10950 I 0.762
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I 0.762
GRMZM2G047918 Zea mays GRMZM2G047918 I 0.762
ONIVA02G10590 Oryza nivara ONIVA02G10590 I 0.762
OPUNC02G08670 Oryza punctata OPUNC02G08670 I 0.762
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I 0.762
LPERR06G15020 Leersia perrieri LPERR06G15020 I 0.762
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I 0.762
Si018188m.g Setaria italica Si018188m.g I 0.762
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I 0.762
GRMZM2G005301 Zea mays GRMZM2G005301 I 0.759
GLYMA01G13410 Glycine max GLYMA01G13410 I 0.754
OPUNC06G16400 Oryza punctata OPUNC06G16400 I 0.753
ONIVA06G21640 Oryza nivara ONIVA06G21640 I 0.753
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I 0.753
OB06G25840 Oryza brachyantha OB06G25840 I 0.753
MLOC_17203 Hordeum vulgare MLOC_17203 I 0.753
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I 0.753
GRMZM5G806839 Zea mays GRMZM5G806839 I 0.753
GRMZM2G073047 Zea mays GRMZM2G073047 I 0.753
OMERI06G18780 Oryza meridionalis OMERI06G18780 I 0.753
F775_14820 Aegilops tauschii F775_14820 I 0.753
Si007144m.g Setaria italica Si007144m.g I 0.753
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I 0.753
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I 0.753
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I 0.747
Si039427m.g Setaria italica Si039427m.g I 0.746
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I 0.746
GRMZM5G889719 Zea mays GRMZM5G889719 I 0.746
Sb01g029065 Sorghum bicolor Sb01g029065 I 0.746
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I 0.746
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D 0.746
MTR_7g046260 Medicago truncatula MTR_7g046260 I 0.745
Cla023465 Citrullus lanatus Cla023465 I 0.740
LPERR10G14320 Leersia perrieri LPERR10G14320 I 0.740
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.737
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.737
F775_11989 Aegilops tauschii F775_11989 I 0.737
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I 0.737
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.734
OB01G16440 Oryza brachyantha OB01G16440 I 0.733
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I 0.731
OMERI08G00520 Oryza meridionalis OMERI08G00520 I 0.731
AC187157.4_FG001 Zea mays AC187157.4_FG001 I 0.731
ONIVA10G21000 Oryza nivara ONIVA10G21000 I 0.731
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I 0.731
OPUNC10G16830 Oryza punctata OPUNC10G16830 I 0.731
BGIOSGA002184 Oryza indica BGIOSGA002184 I 0.730
ONIVA01G08000 Oryza nivara ONIVA01G08000 I 0.730
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I 0.728
Cucsa.116550 Cucumis sativus Cucsa.116550 I 0.724
Si002749m.g Setaria italica Si002749m.g I 0.724
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I 0.724
Cla017050 Citrullus lanatus Cla017050 I 0.724
Sb03g002630 Sorghum bicolor Sb03g002630 I 0.724
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I 0.721
OPUNC01G06210 Oryza punctata OPUNC01G06210 I 0.721
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I 0.721
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I 0.721
OBART01G06440 Oryza barthii OBART01G06440 I 0.721
OS01G0200600 Oryza sativa OS01G0200600 I 0.721
OMERI01G06530 Oryza meridionalis OMERI01G06530 I 0.721
Sb04g032940 Sorghum bicolor Sb04g032940 I 0.720
Si017865m.g Setaria italica Si017865m.g I 0.720
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.720
GRMZM2G072926 Zea mays GRMZM2G072926 I 0.720
GRMZM2G048621 Zea mays GRMZM2G048621 I 0.720
Cucsa.121080 Cucumis sativus Cucsa.121080 I 0.720
GRMZM2G041839 Zea mays GRMZM2G041839 I 0.720
Si019772m.g Setaria italica Si019772m.g I 0.720
GRMZM5G816314 Zea mays GRMZM5G816314 I 0.720
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I 0.720
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I 0.720
Si018222m.g Setaria italica Si018222m.g I 0.718
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I 0.717
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.717
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.717
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I 0.717
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.717
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.715
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.715
ERF035 Arabidopsis thaliana AT3G60490 D 0.715
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.711
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.711
mgf022802m Mimulus guttatus mgf022802m I 0.711
TCM_014892 Theobroma cacao TCM_014892 I 0.711
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.711
Cla004187 Citrullus lanatus Cla004187 I 0.711
Cucsa.235510 Cucumis sativus Cucsa.235510 I 0.711
Bra000366 Brassica rapa Bra000366 I 0.709
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.709
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.709
Pm017610 Prunus mume Pm017610 I 0.709
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.709
30174.m008790 Ricinus communis 30174.m008790 I 0.709
TCM_005639 Theobroma cacao TCM_005639 I 0.709
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.709
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.709
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.709
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.709
Bo3g037480 Brassica oleracea Bo3g037480 I 0.709
ERF034 Arabidopsis thaliana AT2G44940 D 0.709
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.709
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.709
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I 0.709
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.709
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.709
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I 0.708
mgf019024m Mimulus guttatus mgf019024m I 0.708
GRMZM2G028969 Zea mays GRMZM2G028969 I 0.708
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I 0.708
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.706
Ca_05941 Cicer arietinum Ca_05941 I 0.705
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I 0.705
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I 0.705
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I 0.705
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I 0.705
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I 0.705
TCM_044478 Theobroma cacao TCM_044478 I 0.705
MTR_8g102800 Medicago truncatula MTR_8g102800 I 0.705
GLYMA08G03910 Glycine max GLYMA08G03910 I 0.705
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I 0.705
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.705
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I 0.705
Bra040333 Brassica rapa Bra040333 I 0.703
Bra004878 Brassica rapa Bra004878 I 0.703
Bo4g024220 Brassica oleracea Bo4g024220 I 0.703
Bo4g195280 Brassica oleracea Bo4g195280 I 0.703
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.703
GLYMA05G35741 Glycine max GLYMA05G35741 I 0.702
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.701
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.701
Bra037041 Brassica rapa Bra037041 I 0.701
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.701
mgf022971m Mimulus guttatus mgf022971m I 0.701
ERF043 Arabidopsis thaliana AT4G32800 D 0.701
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.701
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.701
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.701
TCM_028851 Theobroma cacao TCM_028851 I 0.701
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.701
Bo7g115860 Brassica oleracea Bo7g115860 I 0.701
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.701
Bo3g171090 Brassica oleracea Bo3g171090 I 0.701
Bra034535 Brassica rapa Bra034535 I 0.701
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.701
30146.m003535 Ricinus communis 30146.m003535 I 0.701
MTR_5g012910 Medicago truncatula MTR_5g012910 I 0.700
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.700
GRMZM5G842961 Zea mays GRMZM5G842961 I 0.699
Si017995m.g Setaria italica Si017995m.g I 0.699
Sb04g032960 Sorghum bicolor Sb04g032960 I 0.699
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I 0.697
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.697
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.697
PK25970.1 Cannabis sativa PK25970.1 I 0.693
Bo3g028500 Brassica oleracea Bo3g028500 I 0.693
Bra023026 Brassica rapa Bra023026 I 0.693
28353.m000054 Ricinus communis 28353.m000054 I 0.692
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.689
OB04G27840 Oryza brachyantha OB04G27840 I 0.689
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I 0.687
TCM_015930 Theobroma cacao TCM_015930 I 0.687
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I 0.687
GSMUA_Achr6G26280_001 Musa acuminata GSMUA_Achr6G26280_001 I 0.686
cassava4979.m1 Manihot esculenta cassava4979.m1 I 0.685
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.684
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I 0.684
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.684
OS02G0657000 Oryza sativa OS02G0657000 I 0.684
OBART04G20820 Oryza barthii OBART04G20820 I 0.684
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.684
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.684
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.684
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.684
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.684
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.684
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.684
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.684
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.684
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.684
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.684
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.684
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.684
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.684
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.684
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.684
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.684
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.684
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.684
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.684
Si012254m.g Setaria italica Si012254m.g I 0.684
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.684
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.684
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.684
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.684
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.684
OS04G0550200 Oryza sativa OS04G0550200 I 0.684
OS04G0549800 Oryza sativa OS04G0549800 I 0.684
cassava33300.m1 Manihot esculenta cassava33300.m1 I 0.683
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I 0.683
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.682
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.682
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I 0.681
Ca_12765 Cicer arietinum Ca_12765 I 0.681
GLYMA05G04920 Glycine max GLYMA05G04920 I 0.681
chr1.CM0206.1000.nd Lotus japonicus chr1.CM0206.1000.nd I 0.681
Gorai.001G049800 Gossypium raimondii Gorai.001G049800 I 0.681
MTR_4g100650 Medicago truncatula MTR_4g100650 I 0.681
GLYMA17G15310 Glycine max GLYMA17G15310 I 0.681
cassava17387.m1 Manihot esculenta cassava17387.m1 I 0.680
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.680
BRADI5G17620 Brachypodium distachyon BRADI5G17620 I 0.679
Bra034273 Brassica rapa Bra034273 I 0.677
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.677
ERF042 Arabidopsis thaliana AT2G25820 I 0.677
LjSGA_095655.1 Lotus japonicus LjSGA_095655.1 I 0.677
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.677
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I 0.677
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.677
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.677
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.677
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.677
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.677
OS04G0549700 Oryza sativa OS04G0549700 I 0.677
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I 0.677
gw1.14.214.1 Physcomitrella patens gw1.14.214.1 I 0.677
OS02G0656600 Oryza sativa OS02G0656600 I 0.677
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.677
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.677
Si010703m.g Setaria italica Si010703m.g I 0.677
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.677
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.677
Pm023417 Prunus mume Pm023417 I 0.677
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.677
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I 0.677
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.677
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.677
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.677
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.677
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.677
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I 0.677
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.677
Cagra.21659s0001 Capsella grandiflora Cagra.21659s0001 I 0.677
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.677
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.677
Carubv10024051m.g Capsella rubella Carubv10024051m.g I 0.677
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.677