MTR_7g062540 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_7g062540 T019860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.784 0.784
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH22928 B3 116 217

Links

Other B3 family TFs
Other Medicago truncatula TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_23296 Cicer arietinum Ca_23296 I 0.969
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.929
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.928
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.918
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.918
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.918
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.918
Ca_21948 Cicer arietinum Ca_21948 I 0.907
30068.m002516 Ricinus communis 30068.m002516 I 0.898
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.898
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.898
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.898
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.898
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.898
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.898
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.898
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.898
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.898
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.897
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.897
PK02218.1 Cannabis sativa PK02218.1 I 0.897
MDP0000139073 Malus domestica MDP0000139073 I 0.897
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.897
TCM_005126 Theobroma cacao TCM_005126 I 0.897
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.897
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.888
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.888
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.887
TCM_016500 Theobroma cacao TCM_016500 I 0.887
MDP0000194603 Malus domestica MDP0000194603 I 0.887
Pm018352 Prunus mume Pm018352 I 0.887
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.887
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.878
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.878
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.878
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.878
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.878
ARF9 Arabidopsis thaliana AT4G23980 I 0.878
PK07332.1 Cannabis sativa PK07332.1 I 0.878
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.878
Bo1g037360 Brassica oleracea Bo1g037360 I 0.876
Cla013021 Citrullus lanatus Cla013021 I 0.876
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.876
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.876
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.876
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.876
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.876
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.876
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.876
Bo7g109250 Brassica oleracea Bo7g109250 I 0.867
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.867
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.867
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.867
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.867
Pm024149 Prunus mume Pm024149 I 0.867
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.867
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.867
Bra019255 Brassica rapa Bra019255 I 0.867
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.866
Bra013748 Brassica rapa Bra013748 I 0.866
Bo3g039330 Brassica oleracea Bo3g039330 I 0.866
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.866
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.866
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.866
ARF11 Arabidopsis thaliana AT2G46530 I 0.866
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.857
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.857
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.857
mgf005549m Mimulus guttatus mgf005549m I 0.857
Bo4g008150 Brassica oleracea Bo4g008150 I 0.856
Bra004530 Brassica rapa Bra004530 I 0.856
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.856
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I 0.856
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I 0.856
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I 0.848
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.847
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I 0.847
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.847
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.847
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.845
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.845
ARF18 Arabidopsis thaliana AT3G61830 I 0.845
Bo8g097320 Brassica oleracea Bo8g097320 I 0.845
Bo01141s010 Brassica oleracea Bo01141s010 I 0.845
Bra014419 Brassica rapa Bra014419 I 0.845
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I 0.838
GLYMA07G06060 Glycine max GLYMA07G06060 I 0.837
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.835
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.827
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.827
GLYMA16G02650 Glycine max GLYMA16G02650 I 0.827
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.825
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.825
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.814
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.814
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I 0.812
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.806
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.806
Solyc08g008380.2 Solanum lycopersicum Solyc08g008380.2 I 0.806
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.804
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.804
Cucsa.303990 Cucumis sativus Cucsa.303990 I 0.804
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.796
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I 0.796
Cla011540 Citrullus lanatus Cla011540 I 0.794
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.794
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.794
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.794
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.794
Si000340m.g Setaria italica Si000340m.g I 0.794
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.794
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.794
PK12669.1 Cannabis sativa PK12669.1 I 0.794
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.794
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.794
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.794
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.786
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.784
Cla019614 Citrullus lanatus Cla019614 I 0.784
TCM_027113 Theobroma cacao TCM_027113 I 0.784
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.784
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.784
mgf015308m Mimulus guttatus mgf015308m I 0.784
OB12G20020 Oryza brachyantha OB12G20020 I 0.784
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.784
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.784
Bo3g108130 Brassica oleracea Bo3g108130 I 0.784
Bra010048 Brassica rapa Bra010048 I 0.784
PK16974.1 Cannabis sativa PK16974.1 I 0.784
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.784
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.784
MDP0000929655 Malus domestica MDP0000929655 I 0.784
MDP0000258032 Malus domestica MDP0000258032 I 0.784
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.784
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.784
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.784
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.784
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.784
mgf006511m Mimulus guttatus mgf006511m I 0.784
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.784
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.784
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.784
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.779
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.776
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.776
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.776
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.776
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.776
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.776
Pm024588 Prunus mume Pm024588 I 0.776
F775_31280 Aegilops tauschii F775_31280 I 0.776
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.776
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.776
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.776
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.776
ARF4 Oryza sativa OS01G0927600 I 0.776
OBART01G42570 Oryza barthii OBART01G42570 I 0.776
Bra035910 Brassica rapa Bra035910 I 0.776
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.776
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.776
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.776
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.776
ARF2 Arabidopsis thaliana AT5G62000 D 0.776
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.776
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.776
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.776
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.776
Bo9g014770 Brassica oleracea Bo9g014770 I 0.776
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.776
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.776
Bo2g161810 Brassica oleracea Bo2g161810 I 0.776
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.776
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.776
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.773
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.773
mgf020855m Mimulus guttatus mgf020855m I 0.773
Solyc08g082630.2 Solanum lycopersicum Solyc08g082630.2 I 0.773
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.773
Si021216m.g Setaria italica Si021216m.g I 0.773
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.773
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.773
Ca_05681 Cicer arietinum Ca_05681 I 0.773
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.773
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.772
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.768
OB02G28170 Oryza brachyantha OB02G28170 I 0.768
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.765
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.765
MDP0000310875 Malus domestica MDP0000310875 I 0.765
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.765
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.765
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.765
ARF23 Oryza indica BGIOSGA033901 I 0.765
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.765
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.765
OS11G0523800 Oryza sativa OS11G0523800 I 0.765
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.765
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.765
F775_32662 Aegilops tauschii F775_32662 I 0.765
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.765
evm.TU.contig_31756 Carica papaya evm.TU.contig_31756 I 0.765
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.765
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.765
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.765
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.765
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.765
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.765
TCM_014743 Theobroma cacao TCM_014743 I 0.765
OB11G21910 Oryza brachyantha OB11G21910 I 0.765
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.765
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.765
OBART11G15270 Oryza barthii OBART11G15270 I 0.765
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.765
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.765
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.765
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.765
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.765
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.763
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.763
Si016562m.g Setaria italica Si016562m.g I 0.763
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.763
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.763
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.763
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.761
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.760
ARF9 Oryza sativa OS04G0442000 I 0.760
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.760
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.760
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.760
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.760
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.760
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.760
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.755
TCM_008374 Theobroma cacao TCM_008374 I 0.755
OB04G20880 Oryza brachyantha OB04G20880 I 0.753
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.753
BRADI5G10950 Brachypodium distachyon BRADI5G10950 I 0.753
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.753
Pavir.Gb01617 Panicum virgatum Pavir.Gb01617 I 0.750
Pavir.Ga01750 Panicum virgatum Pavir.Ga01750 I 0.750
Si009558m.g Setaria italica Si009558m.g I 0.750
Sb06g017490 Sorghum bicolor Sb06g017490 I 0.750
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.746
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.746
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.744
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.742
Traes_2BL_1AED96909 Triticum aestivum Traes_2BL_1AED96909 I 0.742
GSMUA_Achr6G29070_001 Musa acuminata GSMUA_Achr6G29070_001 I 0.742
GRMZM2G017187 Zea mays GRMZM2G017187 I 0.740
Bostr.1040s0030 Boechera stricta Bostr.1040s0030 I 0.735
TCM_004526 Theobroma cacao TCM_004526 I 0.732
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.732
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.724
BRADI4G07470 Brachypodium distachyon BRADI4G07470 I 0.724
MDP0000123466 Malus domestica MDP0000123466 I 0.724
Bostr.15774s0314 Boechera stricta Bostr.15774s0314 N 0.724
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.722
OLONG_013033 Oryza longistaminata OLONG_013033 I 0.722
ONIVA01G11220 Oryza nivara ONIVA01G11220 N 0.719
Bra015374 Brassica rapa Bra015374 N 0.718
Pm019941 Prunus mume Pm019941 I 0.714
Thhalv10029379m.g Eutrema salsugineum Thhalv10029379m.g I 0.714
PK04762.1 Cannabis sativa PK04762.1 I 0.711
Pavir.Ea00026 Panicum virgatum Pavir.Ea00026 I 0.711
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.711
POPTR_0014s12980 Populus trichocarpa POPTR_0014s12980 I 0.711
Sb03g000530 Sorghum bicolor Sb03g000530 I 0.711
Pavir.J22605 Panicum virgatum Pavir.J22605 I 0.711
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.711
Thhalv10029161m.g Eutrema salsugineum Thhalv10029161m.g I 0.711
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
PDK_20s1428911g001 Phoenix dactylifera PDK_20s1428911g001 I 0.707
ORGLA01G0077700 Oryza glaberrima ORGLA01G0077700 I 0.701
ARF1 Oryza sativa OS01G0236300 I 0.701
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.701
BGIOSGA003093 Oryza indica BGIOSGA003093 I 0.701
OPUNC01G08500 Oryza punctata OPUNC01G08500 I 0.701
OLONG_005875 Oryza longistaminata OLONG_005875 I 0.701
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.701
F775_21871 Aegilops tauschii F775_21871 I 0.701
OBART01G08640 Oryza barthii OBART01G08640 I 0.701
TRAES3BF007300580CFD_g Triticum aestivum TRAES3BF007300580CFD_g I 0.701
OGLUM01G09880 Oryza glumaepatula OGLUM01G09880 I 0.701
OMERI01G08660 Oryza meridionalis OMERI01G08660 I 0.701
ORUFI01G09450 Oryza rufipogon ORUFI01G09450 I 0.701
MLOC_65945 Hordeum vulgare MLOC_65945 I 0.701
Pavir.Eb00045 Panicum virgatum Pavir.Eb00045 I 0.701
TRIUR3_28704 Triticum urartu TRIUR3_28704 I 0.701
LPERR01G07680 Leersia perrieri LPERR01G07680 I 0.701