CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.173470
(
Cucumis sativus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cucsa.173470
T022361_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.831
0.831
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.173470.1
B3
128
191
FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRVLVKHL
Links
Other
B3
family TFs
Other
Cucumis sativus
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.962
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.909
OMERI04G24630
Oryza meridionalis
OMERI04G24630
I
0.891
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.881
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.881
TCM_029410
Theobroma cacao
TCM_029410
I
0.881
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.881
TCM_017488
Theobroma cacao
TCM_017488
I
0.881
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.881
MDP0000268306
Malus domestica
MDP0000268306
I
0.881
Lus10031354.g
Linum usitatissimum
Lus10031354.g
I
0.881
Lus10010969.g
Linum usitatissimum
Lus10010969.g
I
0.881
Aquca_002_01425
Aquilegia coerulea
Aquca_002_01425
I
0.881
Ca_15694
Cicer arietinum
Ca_15694
I
0.881
Pm010467
Prunus mume
Pm010467
I
0.881
cassava30266.valid.m1
Manihot esculenta
cassava30266.valid.m1
I
0.881
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.881
cassava35541.valid.m1
Manihot esculenta
cassava35541.valid.m1
I
0.881
Cucsa.047990
Cucumis sativus
Cucsa.047990
I
0.881
cassava30265.valid.m1
Manihot esculenta
cassava30265.valid.m1
I
0.881
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.881
29599.m000177
Ricinus communis
29599.m000177
I
0.881
29769.m000463
Ricinus communis
29769.m000463
I
0.881
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.881
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.881
Cla009963
Citrullus lanatus
Cla009963
I
0.881
Lus10007386.g
Linum usitatissimum
Lus10007386.g
I
0.881
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.881
LjSGA_026543.1
Lotus japonicus
LjSGA_026543.1
I
0.881
MTR_5g076270
Medicago truncatula
MTR_5g076270
I
0.881
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.881
PK26077.1
Cannabis sativa
PK26077.1
I
0.881
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.880
VIT_00s1203g00010
Vitis vinifera
VIT_00s1203g00010
I
0.864
Cla009258
Citrullus lanatus
Cla009258
I
0.864
Cla019844
Citrullus lanatus
Cla019844
I
0.864
SapurV1A.0355s0030
Salix purpurea
SapurV1A.0355s0030
I
0.864
SapurV1A.0147s0210
Salix purpurea
SapurV1A.0147s0210
I
0.864
MDP0000232417
Malus domestica
MDP0000232417
I
0.864
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.864
AMTR_s00092p00072950
Amborella trichopoda
AMTR_s00092p00072950
I
0.864
POPTR_0017s01870
Populus trichocarpa
POPTR_0017s01870
I
0.864
mgf005961m
Mimulus guttatus
mgf005961m
I
0.847
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.847
GSMUA_Achr11G01610_001
Musa acuminata
GSMUA_Achr11G01610_001
I
0.847
PGSC0003DMG401018664
Solanum tuberosum
PGSC0003DMG401018664
I
0.847
OB12G25550
Oryza brachyantha
OB12G25550
I
0.847
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.847
Bra028110
Brassica rapa
Bra028110
I
0.831
BRADI1G46602
Brachypodium distachyon
BRADI1G46602
I
0.831
Ca_05025
Cicer arietinum
Ca_05025
I
0.831
Bo4g136370
Brassica oleracea
Bo4g136370
I
0.831
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.830
OB06G15720
Oryza brachyantha
OB06G15720
I
0.814
F775_00614
Aegilops tauschii
F775_00614
I
0.814
SapurV1A.0289s0180
Salix purpurea
SapurV1A.0289s0180
I
0.814
evm.TU.supercontig_108.15
Carica papaya
evm.TU.supercontig_108.15
I
0.810
AMTR_s00007p00267580
Amborella trichopoda
AMTR_s00007p00267580
I
0.797
Pm027119
Prunus mume
Pm027119
I
0.797
Gorai.010G091300
Gossypium raimondii
Gorai.010G091300
I
0.797
Bo6g099440
Brassica oleracea
Bo6g099440
I
0.797
Bra004125
Brassica rapa
Bra004125
I
0.797
Gorai.008G097200
Gossypium raimondii
Gorai.008G097200
I
0.797
PRUPE_ppa000708mg
Prunus persica
PRUPE_ppa000708mg
I
0.797
VIT_03s0167g00010
Vitis vinifera
VIT_03s0167g00010
I
0.797
VIT_04s0079g00160
Vitis vinifera
VIT_04s0079g00160
I
0.797
MTR_4g124900
Medicago truncatula
MTR_4g124900
I
0.797
Solyc12g006340.1
Solanum lycopersicum
Solyc12g006340.1
I
0.786
mgf012918m
Mimulus guttatus
mgf012918m
I
0.780
PDK_20s1375001g001
Phoenix dactylifera
PDK_20s1375001g001
I
0.780
29739.m003713
Ricinus communis
29739.m003713
I
0.780
Traes_7DS_1948388F8
Triticum aestivum
Traes_7DS_1948388F8
I
0.780
SELMODRAFT_179736
Selaginella moellendorffii
SELMODRAFT_179736
I
0.780
Sb04g003240
Sorghum bicolor
Sb04g003240
I
0.780
POPTR_0006s14070
Populus trichocarpa
POPTR_0006s14070
I
0.780
MTR_2g043250
Medicago truncatula
MTR_2g043250
I
0.780
SELMODRAFT_451392
Selaginella moellendorffii
SELMODRAFT_451392
I
0.780
Traes_7BS_F44A273F8
Triticum aestivum
Traes_7BS_F44A273F8
I
0.780
Traes_7AS_582E3076D
Triticum aestivum
Traes_7AS_582E3076D
I
0.780
MLOC_14584
Hordeum vulgare
MLOC_14584
I
0.780
Traes_2BL_889C1F272
Triticum aestivum
Traes_2BL_889C1F272
I
0.774
PRUPE_ppa024354mg
Prunus persica
PRUPE_ppa024354mg
I
0.770
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.769
evm.TU.supercontig_115.30
Carica papaya
evm.TU.supercontig_115.30
I
0.763
Carubv10000065m.g
Capsella rubella
Carubv10000065m.g
I
0.763
orange1.1g002390m.g
Citrus sinensis
orange1.1g002390m.g
I
0.763
Ciclev10014200m.g
Citrus clementina
Ciclev10014200m.g
I
0.763
TRIUR3_26420
Triticum urartu
TRIUR3_26420
I
0.763
GSMUA_Achr6G19850_001
Musa acuminata
GSMUA_Achr6G19850_001
I
0.763
Solyc02g037530.2
Solanum lycopersicum
Solyc02g037530.2
I
0.763
Si013155m.g
Setaria italica
Si013155m.g
I
0.763
mgf007038m
Mimulus guttatus
mgf007038m
I
0.763
GRMZM2G317900
Zea mays
GRMZM2G317900
I
0.763
GRMZM2G102845
Zea mays
GRMZM2G102845
I
0.763
VIT_11s0016g00640
Vitis vinifera
VIT_11s0016g00640
I
0.763
PDK_20s1359912g002
Phoenix dactylifera
PDK_20s1359912g002
I
0.750
Pavir.Eb02716
Panicum virgatum
Pavir.Eb02716
I
0.729
BGIOSGA014158
Oryza indica
BGIOSGA014158
I
0.729
MLOC_55345
Hordeum vulgare
MLOC_55345
I
0.729
GRMZM2G086949
Zea mays
GRMZM2G086949
I
0.729
PGSC0003DMG400003771
Solanum tuberosum
PGSC0003DMG400003771
I
0.729
GRMZM2G034840
Zea mays
GRMZM2G034840
I
0.729
MDP0000143749
Malus domestica
MDP0000143749
I
0.729
Traes_2AL_05ECC440C
Triticum aestivum
Traes_2AL_05ECC440C
I
0.729
Traes_2BL_E322FD546
Triticum aestivum
Traes_2BL_E322FD546
I
0.729
Traes_2DL_FBE64209C
Triticum aestivum
Traes_2DL_FBE64209C
I
0.729
Lus10024320.g
Linum usitatissimum
Lus10024320.g
I
0.729
Solyc04g081240.2
Solanum lycopersicum
Solyc04g081240.2
I
0.729
Sb06g031900
Sorghum bicolor
Sb06g031900
I
0.729
evm.TU.supercontig_26.25
Carica papaya
evm.TU.supercontig_26.25
I
0.712
OB01G35190
Oryza brachyantha
OB01G35190
I
0.712
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.712
OPUNC04G11520
Oryza punctata
OPUNC04G11520
I
0.712
MTR_1g024025
Medicago truncatula
MTR_1g024025
I
0.712
Cla021128
Citrullus lanatus
Cla021128
I
0.712
Traes_2AL_98457FFEE
Triticum aestivum
Traes_2AL_98457FFEE
I
0.705