LjSGA_026543.1 (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjSGA_026543.1 T024423_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.864 0.864
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_026543.1 B3 128 191

Links

Other B3 family TFs
Other Lotus japonicus TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 1.000
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.982
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.915
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.915
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.915
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.915
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.915
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.915
29769.m000463 Ricinus communis 29769.m000463 I 0.915
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.915
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.915
TCM_017488 Theobroma cacao TCM_017488 I 0.898
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.898
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I 0.898
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.898
POPTR_0011s09450 Populus trichocarpa POPTR_0011s09450 I 0.898
TCM_029410 Theobroma cacao TCM_029410 I 0.898
29599.m000177 Ricinus communis 29599.m000177 I 0.898
Ca_15694 Cicer arietinum Ca_15694 I 0.898
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.898
Cla009258 Citrullus lanatus Cla009258 I 0.898
Cla009963 Citrullus lanatus Cla009963 I 0.898
Pm010467 Prunus mume Pm010467 I 0.898
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.898
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.898
orange1.1g003544m.g Citrus sinensis orange1.1g003544m.g I 0.898
MDP0000294251 Malus domestica MDP0000294251 I 0.898
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.898
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.898
PK26077.1 Cannabis sativa PK26077.1 I 0.898
MDP0000268306 Malus domestica MDP0000268306 I 0.898
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.898
Ciclev10011065m.g Citrus clementina Ciclev10011065m.g I 0.898
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.898
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.898
gene31631-v1.0-hybrid Fragaria vesca gene31631-v1.0-hybrid I 0.898
Gorai.008G054600 Gossypium raimondii Gorai.008G054600 I 0.898
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.898
TCM_001906 Theobroma cacao TCM_001906 I 0.898
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.891
Cla019844 Citrullus lanatus Cla019844 I 0.881
Aquca_022_00246 Aquilegia coerulea Aquca_022_00246 I 0.881
MDP0000232417 Malus domestica MDP0000232417 I 0.881
MDP0000550049 Malus domestica MDP0000550049 I 0.881
Cucsa.173470 Cucumis sativus Cucsa.173470 I 0.881
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.881
GLYMA18G05330 Glycine max GLYMA18G05330 I 0.881
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.881
VIT_00s1203g00010 Vitis vinifera VIT_00s1203g00010 I 0.881
F775_00614 Aegilops tauschii F775_00614 I 0.881
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.881
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.881
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.881
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.881
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.875
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.873
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.864
ARF8 Arabidopsis lyrata fgenesh2_kg.7__3131__AT5G37020.1 I 0.864
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.864
Bo4g136370 Brassica oleracea Bo4g136370 I 0.864
ARF8 Arabidopsis thaliana AT5G37020 D 0.864
Bra028110 Brassica rapa Bra028110 I 0.864
mgf005961m Mimulus guttatus mgf005961m I 0.864
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.864
BRADI5G25767 Brachypodium distachyon BRADI5G25767 I 0.864
Traes_2DL_8434C0251 Triticum aestivum Traes_2DL_8434C0251 I 0.864
Traes_2AL_A7941CB12 Triticum aestivum Traes_2AL_A7941CB12 I 0.864
MLOC_51932 Hordeum vulgare MLOC_51932 I 0.864
GSMUA_Achr5G00590_001 Musa acuminata GSMUA_Achr5G00590_001 I 0.864
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.864
OB12G25550 Oryza brachyantha OB12G25550 I 0.864
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.860
GSMUA_AchrUn_randomG06460_001 Musa acuminata GSMUA_AchrUn_randomG06460_001 I 0.847
BRADI4G01730 Brachypodium distachyon BRADI4G01730 I 0.847
GSMUA_Achr8G13630_001 Musa acuminata GSMUA_Achr8G13630_001 I 0.831
ORGLA02G0045800 Oryza glaberrima ORGLA02G0045800 I 0.831
ORUFI02G05060 Oryza rufipogon ORUFI02G05060 I 0.831
OPUNC02G04120 Oryza punctata OPUNC02G04120 I 0.831
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.831
ARF6 Oryza sativa OS02G0164900 I 0.831
Lus10017640.g Linum usitatissimum Lus10017640.g I 0.831
LPERR02G04280 Leersia perrieri LPERR02G04280 I 0.831
ARF6 Oryza indica BGIOSGA007604 I 0.831
OMERI02G05780 Oryza meridionalis OMERI02G05780 I 0.831
OGLUM02G04770 Oryza glumaepatula OGLUM02G04770 I 0.831
OBART02G04960 Oryza barthii OBART02G04960 I 0.831
Lus10033597.g Linum usitatissimum Lus10033597.g I 0.831
OLONG_020465 Oryza longistaminata OLONG_020465 I 0.831
ONIVA02G05150 Oryza nivara ONIVA02G05150 I 0.831
Ca_05025 Cicer arietinum Ca_05025 I 0.831
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.814
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.814
Sb10g027220 Sorghum bicolor Sb10g027220 I 0.814
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.814
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.814
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I 0.814
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I 0.814
MLOC_58330 Hordeum vulgare MLOC_58330 I 0.814
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.814
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.803
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I 0.797
mgf007038m Mimulus guttatus mgf007038m I 0.797
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.797
GLYMA02G45100 Glycine max GLYMA02G45100 I 0.797
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.797
Pm008963 Prunus mume Pm008963 I 0.797
GLYMA14G03650 Glycine max GLYMA14G03650 I 0.797
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.797
MDP0000319957 Malus domestica MDP0000319957 I 0.797
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.797
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.797
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.797
Eucgr.A02065 Eucalyptus grandis Eucgr.A02065 I 0.797
evm.TU.supercontig_17.53 Carica papaya evm.TU.supercontig_17.53 I 0.797
Pm014818 Prunus mume Pm014818 I 0.797
Gorai.006G008700 Gossypium raimondii Gorai.006G008700 I 0.797
gene22728-v1.0-hybrid Fragaria vesca gene22728-v1.0-hybrid I 0.797
mgf012918m Mimulus guttatus mgf012918m I 0.797
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.797
29739.m003713 Ricinus communis 29739.m003713 I 0.797
MDP0000185253 Malus domestica MDP0000185253 I 0.797
PRUPE_ppa001069mg Prunus persica PRUPE_ppa001069mg I 0.797
MDP0000153538 Malus domestica MDP0000153538 I 0.797
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.797
POPTR_0018s14300 Populus trichocarpa POPTR_0018s14300 I 0.797
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.788
Pm027119 Prunus mume Pm027119 I 0.780
ARF6 Arabidopsis lyrata fgenesh2_kg.1__3210__AT1G30330.2 I 0.780
F775_09095 Aegilops tauschii F775_09095 I 0.780
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.780
Cagra.1508s0171 Capsella grandiflora Cagra.1508s0171 I 0.780
Bo5g062810 Brassica oleracea Bo5g062810 I 0.780
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.780
Bo6g099440 Brassica oleracea Bo6g099440 I 0.780
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.780
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.780
Pavir.Fb01896 Panicum virgatum Pavir.Fb01896 I 0.780
Pavir.Fa00483 Panicum virgatum Pavir.Fa00483 I 0.780
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.780
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I 0.780
Bra004125 Brassica rapa Bra004125 I 0.780
BRADI1G34340 Brachypodium distachyon BRADI1G34340 I 0.780
Thhalv10006747m.g Eutrema salsugineum Thhalv10006747m.g I 0.780
ARF6 Arabidopsis thaliana AT1G30330 I 0.780
Bostr.15697s0332 Boechera stricta Bostr.15697s0332 I 0.780
Carubv10008239m.g Capsella rubella Carubv10008239m.g I 0.780
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.780
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.780
F775_07729 Aegilops tauschii F775_07729 I 0.780
TRIUR3_25750 Triticum urartu TRIUR3_25750 I 0.780
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.780
ORGLA02G0031900 Oryza glaberrima ORGLA02G0031900 I 0.780
OPUNC02G02660 Oryza punctata OPUNC02G02660 I 0.780
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.780
ONIVA02G03290 Oryza nivara ONIVA02G03290 I 0.780
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.780
ORUFI02G03320 Oryza rufipogon ORUFI02G03320 I 0.780
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.780
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.780
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.780
OS08G0520550 Oryza sativa OS08G0520550 I 0.780
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.780
OMERI02G04100 Oryza meridionalis OMERI02G04100 I 0.780
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.780
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.780
OB02G13010 Oryza brachyantha OB02G13010 I 0.780
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.780
GSMUA_Achr8G23850_001 Musa acuminata GSMUA_Achr8G23850_001 I 0.780
LPERR02G03100 Leersia perrieri LPERR02G03100 I 0.780
OB06G15720 Oryza brachyantha OB06G15720 I 0.780
OBART02G03410 Oryza barthii OBART02G03410 I 0.780
OLONG_021742 Oryza longistaminata OLONG_021742 I 0.780
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.780
OGLUM02G03280 Oryza glumaepatula OGLUM02G03280 I 0.780
OBART08G20780 Oryza barthii OBART08G20780 I 0.780
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.780
OS02G0141100 Oryza sativa OS02G0141100 I 0.780
Sb10g029130 Sorghum bicolor Sb10g029130 I 0.780
Traes_7AL_F36D340F4 Triticum aestivum Traes_7AL_F36D340F4 I 0.780
Traes_7DL_343A252DC Triticum aestivum Traes_7DL_343A252DC I 0.780
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.780
Si013155m.g Setaria italica Si013155m.g I 0.780
GSMUA_Achr3G10240_001 Musa acuminata GSMUA_Achr3G10240_001 I 0.780
TRIUR3_19224 Triticum urartu TRIUR3_19224 I 0.780
PDK_20s1359912g002 Phoenix dactylifera PDK_20s1359912g002 I 0.766
GRMZM2G073750 Zea mays GRMZM2G073750 I 0.763
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.763
chr6.CM0420.10.nd Lotus japonicus chr6.CM0420.10.nd N 0.763
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.763
Bra025720 Brassica rapa Bra025720 I 0.763
ARF19 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001739 N 0.763
Bo5g027250 Brassica oleracea Bo5g027250 I 0.763
LPERR08G17530 Leersia perrieri LPERR08G17530 I 0.763
TRIUR3_22410 Triticum urartu TRIUR3_22410 I 0.754
MDP0000211459 Malus domestica MDP0000211459 I 0.746
GRMZM2G034840 Zea mays GRMZM2G034840 I 0.746
GLYMA08G03141 Glycine max GLYMA08G03141 I 0.746
MDP0000143749 Malus domestica MDP0000143749 I 0.746
mgf023734m Mimulus guttatus mgf023734m I 0.746
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.746
Pavir.Ga00157 Panicum virgatum Pavir.Ga00157 I 0.746
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.746
GRMZM2G086949 Zea mays GRMZM2G086949 I 0.746
BGIOSGA014158 Oryza indica BGIOSGA014158 I 0.746
MP Vitis vinifera VIT_18s0001g13930 I 0.746
Eucgr.F02090 Eucalyptus grandis Eucgr.F02090 I 0.746
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.746
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.746
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I 0.746
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.746
Solyc12g006340.1 Solanum lycopersicum Solyc12g006340.1 I 0.746
Gorai.002G124400 Gossypium raimondii Gorai.002G124400 I 0.746
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.746
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I 0.746
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.746
Sb06g031900 Sorghum bicolor Sb06g031900 I 0.746
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I 0.746
Cla021128 Citrullus lanatus Cla021128 I 0.729
Ca_10748 Cicer arietinum Ca_10748 I 0.729
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.729
mgf025960m Mimulus guttatus mgf025960m I 0.729
POPTR_0002s02630 Populus trichocarpa POPTR_0002s02630 I 0.729
cassava45001.m1 Manihot esculenta cassava45001.m1 I 0.729
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.729
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.729
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.712
Bra016517 Brassica rapa Bra016517 N 0.712
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.712
GLYMA01G00510 Glycine max GLYMA01G00510 I 0.712
Bo2g024860 Brassica oleracea Bo2g024860 I 0.712
OB01G35190 Oryza brachyantha OB01G35190 I 0.712
ARF4 Arabidopsis thaliana AT5G60450 I 0.712
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.712
Pavir.Gb00274 Panicum virgatum Pavir.Gb00274 I 0.710
Ca_05876 Cicer arietinum Ca_05876 N 0.708