PDK_20s1375001g001 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1375001g001 T024462_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.771 0.771
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1375001g001 B3 76 163

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29739.m003713 Ricinus communis 29739.m003713 I 0.928
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.928
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.916
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.904
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.892
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.880
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.880
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.880
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.880
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.880
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.865
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.855
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.855
OB06G15720 Oryza brachyantha OB06G15720 I 0.855
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.846
Pm010467 Prunus mume Pm010467 I 0.843
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.843
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.843
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.843
TCM_029410 Theobroma cacao TCM_029410 I 0.843
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.843
MDP0000268306 Malus domestica MDP0000268306 I 0.843
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.843
MDP0000143749 Malus domestica MDP0000143749 I 0.843
29599.m000177 Ricinus communis 29599.m000177 I 0.843
PK26077.1 Cannabis sativa PK26077.1 I 0.843
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.843
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.831
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.831
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.831
Cla019844 Citrullus lanatus Cla019844 I 0.831
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.831
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.831
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.819
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.818
cassava44112.valid.m1 Manihot esculenta cassava44112.valid.m1 I 0.806
TCM_039715 Theobroma cacao TCM_039715 I 0.806
SapurV1A.0001s2530 Salix purpurea SapurV1A.0001s2530 I 0.806
Lus10027600.g Linum usitatissimum Lus10027600.g I 0.796
POPTR_0006s07740 Populus trichocarpa POPTR_0006s07740 I 0.796
LPERR06G22130 Leersia perrieri LPERR06G22130 I 0.796
MDP0000185253 Malus domestica MDP0000185253 I 0.796
OPUNC06G24250 Oryza punctata OPUNC06G24250 I 0.796
OB06G34290 Oryza brachyantha OB06G34290 I 0.796
Pm008963 Prunus mume Pm008963 I 0.796
OGLUM06G27960 Oryza glumaepatula OGLUM06G27960 I 0.796
Ciclev10007292m.g Citrus clementina Ciclev10007292m.g I 0.796
orange1.1g001969m.g Citrus sinensis orange1.1g001969m.g I 0.796
ORGLA06G0221800 Oryza glaberrima ORGLA06G0221800 I 0.796
Aquca_018_00174 Aquilegia coerulea Aquca_018_00174 I 0.796
OMERI06G26660 Oryza meridionalis OMERI06G26660 I 0.796
ORUFI06G28510 Oryza rufipogon ORUFI06G28510 I 0.796
Lus10022943.g Linum usitatissimum Lus10022943.g I 0.796
OBART06G26550 Oryza barthii OBART06G26550 I 0.796
OS06G0702600 Oryza sativa OS06G0702600 I 0.796
BGIOSGA023559 Oryza indica BGIOSGA023559 I 0.796
GSMUA_Achr9G14090_001 Musa acuminata GSMUA_Achr9G14090_001 I 0.796
PK20354.1 Cannabis sativa PK20354.1 I 0.796
ONIVA06G29090 Oryza nivara ONIVA06G29090 I 0.796
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.796
PDK_20s1410001g001 Phoenix dactylifera PDK_20s1410001g001 I 0.794
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.786
POPTR_0018s14300 Populus trichocarpa POPTR_0018s14300 I 0.786
30185.m000956 Ricinus communis 30185.m000956 I 0.786
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.786
OBART08G20780 Oryza barthii OBART08G20780 I 0.786
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.786
VIT_11s0065g00310 Vitis vinifera VIT_11s0065g00310 I 0.786
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.786
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.786
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.786
OS08G0520550 Oryza sativa OS08G0520550 I 0.786
Cucsa.071070 Cucumis sativus Cucsa.071070 I 0.786
SapurV1A.0521s0030 Salix purpurea SapurV1A.0521s0030 I 0.786
Cla005884 Citrullus lanatus Cla005884 I 0.786
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.786
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.786
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.783
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.782
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.780
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.780
Cucsa.173470 Cucumis sativus Cucsa.173470 I 0.780
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.776
chr2.CM0373.570.nc Lotus japonicus chr2.CM0373.570.nc I 0.776
Sb10g029130 Sorghum bicolor Sb10g029130 I 0.776
Traes_7DL_343A252DC Triticum aestivum Traes_7DL_343A252DC I 0.776
GSMUA_Achr8G23850_001 Musa acuminata GSMUA_Achr8G23850_001 I 0.776
TCM_037484 Theobroma cacao TCM_037484 I 0.776
TRIUR3_25750 Triticum urartu TRIUR3_25750 I 0.776
F775_07729 Aegilops tauschii F775_07729 I 0.776
Traes_7AL_F36D340F4 Triticum aestivum Traes_7AL_F36D340F4 I 0.776
BRADI1G34340 Brachypodium distachyon BRADI1G34340 I 0.776
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.771
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.770
Cla009258 Citrullus lanatus Cla009258 I 0.767
Eucgr.C02178 Eucalyptus grandis Eucgr.C02178 I 0.765
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.765
Eucgr.C03293 Eucalyptus grandis Eucgr.C03293 I 0.765
Pm027119 Prunus mume Pm027119 I 0.765
gene12224-v1.0-hybrid Fragaria vesca gene12224-v1.0-hybrid I 0.765
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.765
Si005741m.g Setaria italica Si005741m.g I 0.765
ORGLA02G0031900 Oryza glaberrima ORGLA02G0031900 I 0.765
OB02G13010 Oryza brachyantha OB02G13010 I 0.765
MLOC_63193 Hordeum vulgare MLOC_63193 I 0.765
MDP0000876321 Malus domestica MDP0000876321 I 0.765
OBART02G03410 Oryza barthii OBART02G03410 I 0.765
OGLUM02G03280 Oryza glumaepatula OGLUM02G03280 I 0.765
LPERR02G03100 Leersia perrieri LPERR02G03100 I 0.765
OS02G0141100 Oryza sativa OS02G0141100 I 0.765
GLYMA09G08350 Glycine max GLYMA09G08350 I 0.765
AMTR_s00025p00198750 Amborella trichopoda AMTR_s00025p00198750 I 0.765
GLYMA15G19980 Glycine max GLYMA15G19980 I 0.765
Pavir.J00164 Panicum virgatum Pavir.J00164 I 0.765
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.765
OLONG_021742 Oryza longistaminata OLONG_021742 I 0.765
Pavir.Db00232 Panicum virgatum Pavir.Db00232 I 0.765
OPUNC02G02660 Oryza punctata OPUNC02G02660 I 0.765
ORUFI02G03320 Oryza rufipogon ORUFI02G03320 I 0.765
ONIVA02G03290 Oryza nivara ONIVA02G03290 I 0.765
OMERI02G04100 Oryza meridionalis OMERI02G04100 I 0.765
Pavir.Fa00483 Panicum virgatum Pavir.Fa00483 I 0.755
MLOC_73144 Hordeum vulgare MLOC_73144 I 0.755
Traes_6BS_444DFA94E Triticum aestivum Traes_6BS_444DFA94E I 0.755
Traes_6AS_967D58FB4 Triticum aestivum Traes_6AS_967D58FB4 I 0.755
gene12917-v1.0-hybrid Fragaria vesca gene12917-v1.0-hybrid I 0.755
LPERR08G17530 Leersia perrieri LPERR08G17530 I 0.755
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I 0.755
Pavir.Fb01896 Panicum virgatum Pavir.Fb01896 I 0.755
SapurV1A.2095s0020 Salix purpurea SapurV1A.2095s0020 I 0.755
cassava25060.valid.m1 Manihot esculenta cassava25060.valid.m1 I 0.755
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.755
SapurV1A.0870s0230 Salix purpurea SapurV1A.0870s0230 I 0.755
Gorai.012G009000 Gossypium raimondii Gorai.012G009000 I 0.755
Traes_6DS_8BE5BE6AC Triticum aestivum Traes_6DS_8BE5BE6AC I 0.755
Si013155m.g Setaria italica Si013155m.g I 0.755
MDP0000886637 Malus domestica MDP0000886637 I 0.755
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.754
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.750
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.746
POPTR_0018s07420 Populus trichocarpa POPTR_0018s07420 I 0.745
BRADI3G40437 Brachypodium distachyon BRADI3G40437 I 0.745
NPH4 Arabidopsis lyrata fgenesh2_kg.6__2115__AT5G20730.1 I 0.745
Cagra.1796s0004 Capsella grandiflora Cagra.1796s0004 I 0.745
Thhalv10012513m.g Eutrema salsugineum Thhalv10012513m.g I 0.745
Bo2g023110 Brassica oleracea Bo2g023110 I 0.745
Bra020125 Brassica rapa Bra020125 I 0.745
NPH4 Arabidopsis thaliana AT5G20730 I 0.745
GSMUA_Achr9G18170_001 Musa acuminata GSMUA_Achr9G18170_001 I 0.745
mgf012918m Mimulus guttatus mgf012918m I 0.745
Bostr.26527s0132 Boechera stricta Bostr.26527s0132 I 0.745
MTR_8g101360 Medicago truncatula MTR_8g101360 I 0.745
ARF19 Arabidopsis thaliana AT1G19220 I 0.735
Cagra.1961s0078 Capsella grandiflora Cagra.1961s0078 I 0.735
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.735
Thhalv10006635m.g Eutrema salsugineum Thhalv10006635m.g I 0.735
Bostr.7128s0527 Boechera stricta Bostr.7128s0527 I 0.735
Bo5g027250 Brassica oleracea Bo5g027250 I 0.735
Bra025720 Brassica rapa Bra025720 I 0.735
BRADI3G03407 Brachypodium distachyon BRADI3G03407 I 0.735
Carubv10008159m.g Capsella rubella Carubv10008159m.g I 0.735
Pavir.J32718 Panicum virgatum Pavir.J32718 I 0.735
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.735
Ca_19289 Cicer arietinum Ca_19289 I 0.735
Si016147m.g Setaria italica Si016147m.g I 0.735
VIT_00s1203g00010 Vitis vinifera VIT_00s1203g00010 I 0.727
gene08492-v1.0-hybrid Fragaria vesca gene08492-v1.0-hybrid I 0.724
OMERI03G32190 Oryza meridionalis OMERI03G32190 I 0.724
ARF16 Oryza indica BGIOSGA022468 I 0.724
PDK_20s1354161g001 Phoenix dactylifera PDK_20s1354161g001 I 0.724
OGLUM06G06490 Oryza glumaepatula OGLUM06G06490 I 0.724
OS06G0196700 Oryza sativa OS06G0196700 I 0.724
LPERR06G05720 Leersia perrieri LPERR06G05720 I 0.724
ONIVA06G07160 Oryza nivara ONIVA06G07160 I 0.724
Bra002327 Brassica rapa Bra002327 I 0.724
OLONG_009780 Oryza longistaminata OLONG_009780 I 0.724
ORGLA06G0056900 Oryza glaberrima ORGLA06G0056900 I 0.724
GLYMA08G03141 Glycine max GLYMA08G03141 I 0.724
OBART06G06150 Oryza barthii OBART06G06150 I 0.724
Sb10g006440 Sorghum bicolor Sb10g006440 I 0.724
GRMZM2G160005 Zea mays GRMZM2G160005 I 0.724
OPUNC06G05940 Oryza punctata OPUNC06G05940 I 0.724
ORUFI06G06450 Oryza rufipogon ORUFI06G06450 I 0.724
Ca_05876 Cicer arietinum Ca_05876 N 0.723
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.722
Solyc07g016180.2 Solanum lycopersicum Solyc07g016180.2 I 0.722
Cla017138 Citrullus lanatus Cla017138 I 0.722
PGSC0003DMG400009773 Solanum tuberosum PGSC0003DMG400009773 I 0.722
chr6.CM0420.10.nd Lotus japonicus chr6.CM0420.10.nd N 0.721
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.719
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.717
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.716
Gorai.001G017000 Gossypium raimondii Gorai.001G017000 I 0.714
Traes_7DS_7375BED72 Triticum aestivum Traes_7DS_7375BED72 I 0.714
Si005753m.g Setaria italica Si005753m.g I 0.714
Gorai.002G124400 Gossypium raimondii Gorai.002G124400 I 0.714
Lus10012421.g Linum usitatissimum Lus10012421.g I 0.714
MDP0000211459 Malus domestica MDP0000211459 I 0.714
OB08G27580 Oryza brachyantha OB08G27580 I 0.714
Pavir.Db01975 Panicum virgatum Pavir.Db01975 I 0.714
GSMUA_Achr1G20040_001 Musa acuminata GSMUA_Achr1G20040_001 I 0.714
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.714
TRIUR3_33045 Triticum urartu TRIUR3_33045 I 0.714
Traes_7BS_3FD792335 Triticum aestivum Traes_7BS_3FD792335 I 0.714
Bo9g151530 Brassica oleracea Bo9g151530 I 0.714
Bo8g068380 Brassica oleracea Bo8g068380 I 0.714
mgf023734m Mimulus guttatus mgf023734m I 0.714
F775_12532 Aegilops tauschii F775_12532 I 0.714
Bo6g099440 Brassica oleracea Bo6g099440 I 0.711
cassava7809.valid.m1 Manihot esculenta cassava7809.valid.m1 I 0.711
Bra004125 Brassica rapa Bra004125 I 0.711
Ca_03128 Cicer arietinum Ca_03128 I 0.711
GLYMA01G00510 Glycine max GLYMA01G00510 I 0.711
PK17611.1 Cannabis sativa PK17611.1 I 0.711
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.710
GSMUA_Achr3G10240_001 Musa acuminata GSMUA_Achr3G10240_001 I 0.704
Pavir.Da01885 Panicum virgatum Pavir.Da01885 I 0.704
orange1.1g002624m.g Citrus sinensis orange1.1g002624m.g I 0.704
Pavir.Ab00366 Panicum virgatum Pavir.Ab00366 I 0.704
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.704
MTR_3g064050 Medicago truncatula MTR_3g064050 I 0.704
GLYMA11G31940 Glycine max GLYMA11G31940 I 0.704
GLYMA13G29320 Glycine max GLYMA13G29320 I 0.704
BRADI5G25157 Brachypodium distachyon BRADI5G25157 I 0.704
GLYMA14G38940 Glycine max GLYMA14G38940 I 0.704
GLYMA02G40650 Glycine max GLYMA02G40650 I 0.704
GLYMA15G09750 Glycine max GLYMA15G09750 I 0.704
GLYMA18G05330 Glycine max GLYMA18G05330 I 0.704
OLONG_005008 Oryza longistaminata OLONG_005008 I 0.704
Cla009963 Citrullus lanatus Cla009963 I 0.704
Ca_08872 Cicer arietinum Ca_08872 I 0.704
Ciclev10014198m.g Citrus clementina Ciclev10014198m.g I 0.704
Eucgr.F02090 Eucalyptus grandis Eucgr.F02090 I 0.704
Cla021128 Citrullus lanatus Cla021128 I 0.704
Pm006237 Prunus mume Pm006237 I 0.704
mgf004340m Mimulus guttatus mgf004340m I 0.704
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.704
cassava45001.m1 Manihot esculenta cassava45001.m1 I 0.704
30170.m014161 Ricinus communis 30170.m014161 I 0.704
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.704
TCM_001906 Theobroma cacao TCM_001906 I 0.704
Cucsa.342870 Cucumis sativus Cucsa.342870 I 0.704
ONIVA04G27140 Oryza nivara ONIVA04G27140 I 0.704
MDP0000232417 Malus domestica MDP0000232417 I 0.704
OGLUM04G28480 Oryza glumaepatula OGLUM04G28480 I 0.704
OB04G35570 Oryza brachyantha OB04G35570 I 0.704
OPUNC04G26100 Oryza punctata OPUNC04G26100 I 0.704
ORGLA04G0248600 Oryza glaberrima ORGLA04G0248600 I 0.704
PRUPE_ppa000946mg Prunus persica PRUPE_ppa000946mg I 0.704
OS04G0664400 Oryza sativa OS04G0664400 I 0.704
GLYMA05G36430 Glycine max GLYMA05G36430 I 0.701
orange1.1g001728m.g Citrus sinensis orange1.1g001728m.g I 0.701
LjSGA_069146.1 Lotus japonicus LjSGA_069146.1 I 0.701
Ciclev10007286m.g Citrus clementina Ciclev10007286m.g I 0.701
GLYMA17G05220 Glycine max GLYMA17G05220 I 0.701
GLYMA13G17270 Glycine max GLYMA13G17270 I 0.701
chr4.CM0006.290.nc Lotus japonicus chr4.CM0006.290.nc I 0.701