CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G21820
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI2G21820
T057567_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.811
0.840
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.811
0.840
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.811
0.840
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.811
0.840
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.811
0.840
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G21820.1
bZIP
259
308
VERKQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQKELD
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
215 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
0.822
Bo6g072380
Brassica oleracea
Bo6g072380
I
0.822
Bo4g112690
Brassica oleracea
Bo4g112690
I
0.822
Bo8g091160
Brassica oleracea
Bo8g091160
I
0.822
Bra003253
Brassica rapa
Bra003253
I
0.822
Bra014668
Brassica rapa
Bra014668
I
0.822
Bra007276
Brassica rapa
Bra007276
I
0.822
Bra007274
Brassica rapa
Bra007274
I
0.822
MDP0000273211
Malus domestica
MDP0000273211
I
0.811
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.811
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.811
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.811
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.811
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.811
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.811
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.811
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.811
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.811
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.811
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.811
TCM_044596
Theobroma cacao
TCM_044596
I
0.811
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.811
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.811
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.811
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.811
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.811
Ca_23748
Cicer arietinum
Ca_23748
I
0.810
OLONG_003399
Oryza longistaminata
OLONG_003399
I
0.809
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.809
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.809
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.809
OB05G28440
Oryza brachyantha
OB05G28440
I
0.809
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.809
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
0.809
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.809
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
0.809
mgf011003m
Mimulus guttatus
mgf011003m
I
0.809
OS05G0489700
Oryza sativa
OS05G0489700
I
0.809
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.809
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.809
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
0.809
Sb02g043620
Sorghum bicolor
Sb02g043620
I
0.809
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
0.809
Sb09g023920
Sorghum bicolor
Sb09g023920
I
0.809
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.809
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
0.809
OBART05G21000
Oryza barthii
OBART05G21000
I
0.809
GRMZM2G077124
Zea mays
GRMZM2G077124
I
0.809
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
0.809
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.809
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.809
GRMZM2G161009
Zea mays
GRMZM2G161009
I
0.809
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
0.809
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.809
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
0.809
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.809
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.809
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.809
Cla013878
Citrullus lanatus
Cla013878
I
0.808
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.808
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.808
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.808
Pm016826
Prunus mume
Pm016826
I
0.808
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.808
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.808
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.808
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.808
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.808
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
0.808
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
0.808
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
0.808
mgf002556m
Mimulus guttatus
mgf002556m
I
0.808
OS07G0686100
Oryza sativa
OS07G0686100
I
0.808
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.808
30226.m002055
Ricinus communis
30226.m002055
I
0.808
OS03G0322700
Oryza sativa
OS03G0322700
I
0.808
F775_31964
Aegilops tauschii
F775_31964
I
0.808
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.808
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.808
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.808
OB07G32300
Oryza brachyantha
OB07G32300
I
0.808
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.808
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.808
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.808
MTR_3g010660
Medicago truncatula
MTR_3g010660
I
0.808
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.808
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.808
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
0.808
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.808
OBART07G26790
Oryza barthii
OBART07G26790
I
0.808
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.808
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.808
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.808
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.808
Ca_08143
Cicer arietinum
Ca_08143
I
0.808
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.808
Si022639m.g
Setaria italica
Si022639m.g
I
0.808
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
0.807
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
0.807
Bra016953
Brassica rapa
Bra016953
I
0.807
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
0.807
MDP0000215106
Malus domestica
MDP0000215106
I
0.807
OB01G43630
Oryza brachyantha
OB01G43630
I
0.804
ORGLA01G0286100
Oryza glaberrima
ORGLA01G0286100
I
0.804
Si002173m.g
Setaria italica
Si002173m.g
I
0.803
OGLUM01G38810
Oryza glumaepatula
OGLUM01G38810
I
0.803
OMERI01G32080
Oryza meridionalis
OMERI01G32080
I
0.803
OLONG_002030
Oryza longistaminata
OLONG_002030
I
0.803
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
0.803
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
0.803
ONIVA01G39770
Oryza nivara
ONIVA01G39770
I
0.803
OBART01G34790
Oryza barthii
OBART01G34790
I
0.803
ORUFI01G38120
Oryza rufipogon
ORUFI01G38120
I
0.803
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
0.802
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
0.802
OS01G0813100
Oryza sativa
OS01G0813100
I
0.801
F775_17024
Aegilops tauschii
F775_17024
I
0.801
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
0.801
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
0.801
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
0.801
MLOC_4554
Hordeum vulgare
MLOC_4554
I
0.801
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
0.801
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
0.800
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
0.800
Carubv10023893m.g
Capsella rubella
Carubv10023893m.g
I
0.799
Pm004043
Prunus mume
Pm004043
I
0.799
Gorai.005G259700
Gossypium raimondii
Gorai.005G259700
I
0.799
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
0.799
Cagra.1642s0072
Capsella grandiflora
Cagra.1642s0072
I
0.799
Aquca_009_00009
Aquilegia coerulea
Aquca_009_00009
I
0.799
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
0.799
PRUPE_ppa025544mg
Prunus persica
PRUPE_ppa025544mg
I
0.799
Solyc01g104650.2
Solanum lycopersicum
Solyc01g104650.2
I
0.799
PGSC0003DMG400029774
Solanum tuberosum
PGSC0003DMG400029774
I
0.799
MLOC_16096
Hordeum vulgare
MLOC_16096
I
0.799
PGSC0003DMG400007208
Solanum tuberosum
PGSC0003DMG400007208
I
0.799
F775_28711
Aegilops tauschii
F775_28711
I
0.799
GLYMA06G47220
Glycine max
GLYMA06G47220
I
0.799
GLYMA04G14840
Glycine max
GLYMA04G14840
I
0.798
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.797
OBART01G37980
Oryza barthii
OBART01G37980
I
0.797
chr4.CM0337.330.nc
Lotus japonicus
chr4.CM0337.330.nc
I
0.797
Ca_15706
Cicer arietinum
Ca_15706
I
0.797
Bo4g012940
Brassica oleracea
Bo4g012940
I
0.797
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.797
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.797
Sb03g040510
Sorghum bicolor
Sb03g040510
I
0.797
GRMZM2G159134
Zea mays
GRMZM2G159134
I
0.797
Si001731m.g
Setaria italica
Si001731m.g
I
0.797
EEL
Arabidopsis thaliana
AT2G41070
I
0.797
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
0.797
GLYMA05G25200
Glycine max
GLYMA05G25200
I
0.797
MDP0000706379
Malus domestica
MDP0000706379
I
0.797
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
0.797
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
0.797
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I
0.796
Gorai.002G207000
Gossypium raimondii
Gorai.002G207000
I
0.796
MDP0000198495
Malus domestica
MDP0000198495
I
0.796
Ciclev10002029m.g
Citrus clementina
Ciclev10002029m.g
I
0.796
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
0.796
TCM_006432
Theobroma cacao
TCM_006432
I
0.796
Cla000389
Citrullus lanatus
Cla000389
I
0.796
OLONG_014546
Oryza longistaminata
OLONG_014546
I
0.795
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
0.795
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
0.795
OB01G46760
Oryza brachyantha
OB01G46760
I
0.795
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
0.795
GRMZM2G168079
Zea mays
GRMZM2G168079
I
0.795
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
0.795
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
0.795
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
0.795
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
0.795
29955.m001177
Ricinus communis
29955.m001177
I
0.795
OS01G0859300
Oryza sativa
OS01G0859300
I
0.795
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
0.794
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
0.794
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
0.794
Sb01g036810
Sorghum bicolor
Sb01g036810
I
0.794
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
0.794
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
0.793
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
0.793
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.793
F775_32479
Aegilops tauschii
F775_32479
I
0.793
Traes_4DL_F38ED7FB6
Triticum aestivum
Traes_4DL_F38ED7FB6
I
0.793
TRIUR3_15490
Triticum urartu
TRIUR3_15490
I
0.793
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
0.793
Traes_4BL_4C9A415F3
Triticum aestivum
Traes_4BL_4C9A415F3
I
0.793
MLOC_61490
Hordeum vulgare
MLOC_61490
I
0.793
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
0.793
MLOC_34679
Hordeum vulgare
MLOC_34679
I
0.793
Traes_4AS_F9C171219
Triticum aestivum
Traes_4AS_F9C171219
I
0.793
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
0.791
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
0.791
Sb03g037740
Sorghum bicolor
Sb03g037740
I
0.791
F775_43558
Aegilops tauschii
F775_43558
I
0.789
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.788
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.788
GSMUA_Achr2G20490_001
Musa acuminata
GSMUA_Achr2G20490_001
I
0.787
ATBZIP27
Arabidopsis thaliana
AT2G17770
I
0.786
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
0.786
MDP0000740787
Malus domestica
MDP0000740787
I
0.786
MTR_8g043960
Medicago truncatula
MTR_8g043960
I
0.786
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
0.785
mgf009464m
Mimulus guttatus
mgf009464m
N
0.785
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
0.785
SELMODRAFT_443424
Selaginella moellendorffii
SELMODRAFT_443424
I
0.785
SapurV1A.2287s0010
Salix purpurea
SapurV1A.2287s0010
I
0.784
SapurV1A.0362s0080
Salix purpurea
SapurV1A.0362s0080
I
0.784
FD
Arabidopsis lyrata
Al_scaffold_0007_453
I
0.784
POPTR_0016s02460
Populus trichocarpa
POPTR_0016s02460
I
0.784
FD
Arabidopsis thaliana
AT4G35900
I
0.784
POPTR_0006s02670
Populus trichocarpa
POPTR_0006s02670
I
0.783
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.783
DPBF2
Vitis vinifera
VIT_06s0080g00340
I
0.782
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
0.782