ZNF550 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000002421 T088229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.817 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000003515 C2H2 ZF 202 224
ENSCAFP00000003515 C2H2 ZF 230 252
ENSCAFP00000003515 C2H2 ZF 258 280
ENSCAFP00000003515 C2H2 ZF 286 308
ENSCAFP00000003515 C2H2 ZF 314 336
ENSCAFP00000003515 C2H2 ZF 342 364
ENSCAFP00000003515 C2H2 ZF 370 392
ENSCAFP00000003515 C2H2 ZF 398 420

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004910 Ailuropoda melanoleuca ENSAMEG00000004910 I 0.827
ENSTSYG00000004591 Tarsius syrichta ENSTSYG00000004591 I 0.822
ZNF550 Callithrix jacchus ENSCJAG00000000044 I 0.819
ENSNLEG00000010977 Nomascus leucogenys ENSNLEG00000010977 I 0.817
ZNF550 Pan troglodytes ENSPTRG00000011560 I 0.817
ENSMMUP00000031401 Macaca fascicularis ENSMMUP00000031401 I 0.817
ZNF550 Gorilla gorilla ENSGGOG00000014068 I 0.817
ENSCSAG00000001629 Chlorocebus sabaeus ENSCSAG00000001629 I 0.817
ZNF550 Homo sapiens ENSG00000251369 D 0.817
ZNF550 Macaca mulatta ENSMMUG00000006122 I 0.817
ENSMPUG00000006298 Mustela putorius furo ENSMPUG00000006298 I 0.816
ZNF550 Tursiops truncatus ENSTTRG00000000293 I 0.802
ENSOARG00000003673 Ovis aries ENSOARG00000003673 I 0.784