CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf143b
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000041581
T090915_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.814
0.938
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.814
0.938
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.814
0.938
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.814
0.938
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.814
0.938
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.814
0.938
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.814
0.938
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.813
0.932
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.766
0.832
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.766
0.832
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.766
0.832
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.766
0.832
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000009795
C2H2 ZF
230
254
FRCEHEGCGKLYTTAHHLKVHERSH
ENSDARP00000009795
C2H2 ZF
260
284
YICDHLGCGKKFATGYGLKSHVRTH
ENSDARP00000009795
C2H2 ZF
290
314
YRCQELNCLKSFKTSGDLQKHTRTH
ENSDARP00000009795
C2H2 ZF
320
344
FKCPFEGCGRSFTTSNIRKVHIRTH
ENSDARP00000009795
C2H2 ZF
350
374
YYCAEPNCGRAFASATNYKNHMRIH
ENSDARP00000009795
C2H2 ZF
380
404
YVCTVPGCDKRFTEYSSLYKHHVVH
ENSDARP00000009795
C2H2 ZF
410
433
YNCNHCGKTYKQISTLAMHKRTAH
ENSDARP00000090890
C2H2 ZF
177
201
FRCEHEGCGKLYTTAHHLKVHERSH
ENSDARP00000090890
C2H2 ZF
207
231
YICDHLGCGKKFATGYGLKSHVRTH
ENSDARP00000090890
C2H2 ZF
237
261
YRCQELNCLKSFKTSGDLQKHTRTH
ENSDARP00000090890
C2H2 ZF
267
291
FKCPFEGCGRSFTTSNIRKVHIRTH
ENSDARP00000090890
C2H2 ZF
297
321
YYCAEPNCGRAFASATNYKNHMRIH
ENSDARP00000090890
C2H2 ZF
327
351
YVCTVPGCDKRFTEYSSLYKHHVVH
ENSDARP00000090890
C2H2 ZF
357
380
YNCNHCGKTYKQISTLAMHKRTAH
ENSDARP00000122626
C2H2 ZF
254
278
FRCEHEGCGKLYTTAHHLKVHERSH
ENSDARP00000122626
C2H2 ZF
284
308
YICDHLGCGKKFATGYGLKSHVRTH
ENSDARP00000122626
C2H2 ZF
314
338
YRCQELNCLKSFKTSGDLQKHTRTH
ENSDARP00000122626
C2H2 ZF
344
368
FKCPFEGCGRSFTTSNIRKVHIRTH
ENSDARP00000122626
C2H2 ZF
374
398
YYCAEPNCGRAFASATNYKNHMRIH
ENSDARP00000122626
C2H2 ZF
404
428
YVCTVPGCDKRFTEYSSLYKHHVVH
ENSDARP00000122626
C2H2 ZF
434
457
YNCNHCGKTYKQISTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000003833
Astyanax mexicanus
ENSAMXG00000003833
I
0.824
ENSGMOG00000001888
Gadus morhua
ENSGMOG00000001888
I
0.823
ENSONIG00000015524
Oreochromis niloticus
ENSONIG00000015524
I
0.822
znf143b
Gasterosteus aculeatus
ENSGACG00000009776
I
0.821
znf143b
Tetraodon nigroviridis
ENSTNIG00000013739
I
0.817
znf143
Takifugu rubripes
ENSTRUG00000009324
I
0.817
ENSPFOG00000008911
Poecilia formosa
ENSPFOG00000008911
I
0.816
ENSLOCG00000003619
Lepisosteus oculatus
ENSLOCG00000003619
I
0.816
ENSXMAG00000005152
Xiphophorus maculatus
ENSXMAG00000005152
I
0.816
znf143b
Oryzias latipes
ENSORLG00000001130
I
0.816
ENSP00000379847
Macaca fascicularis
ENSP00000379847
I
0.814
ZNF143
Monodelphis domestica
ENSMODG00000007909
I
0.814
ZNF143
Loxodonta africana
ENSLAFG00000004487
I
0.814
ENSMPUG00000012796
Mustela putorius furo
ENSMPUG00000012796
I
0.814
ZNF143
Microcebus murinus
ENSMICG00000004353
I
0.814
Alligator_sinensis_CCG018668.1
Alligator sinensis
Alligator_sinensis_CCG018668.1
I
0.814
ZNF143
Pan troglodytes
ENSPTRG00000003349
I
0.814
ENSTSYG00000004324
Tarsius syrichta
ENSTSYG00000004324
I
0.814
ENSPSIG00000009683
Pelodiscus sinensis
ENSPSIG00000009683
I
0.814
ENSPPYG00000003495
Pongo abelii
ENSPPYG00000003495
I
0.814
ENSPANG00000002501
Papio anubis
ENSPANG00000002501
I
0.814
ZNF143
Homo sapiens
ENSG00000166478
D
0.814
ZNF143
Otolemur garnettii
ENSOGAG00000011518
I
0.814
ZNF143
Macaca mulatta
ENSMMUG00000008758
I
0.814
znf143
Xenopus tropicalis
XB-GENE-1012504
I
0.814
ZNF143
Equus caballus
ENSECAG00000018889
I
0.814
ZNF143
Canis familiaris
ENSCAFG00000007373
I
0.814
ZNF143
Cavia porcellus
ENSCPOG00000003109
I
0.814
AAH73068
Xenopus laevis
AAH73068
I
0.814
ZNF143
Callithrix jacchus
ENSCJAG00000011327
I
0.814
ZNF143
Erinaceus europaeus
ENSEEUG00000000955
I
0.814
ENSAMEG00000003872
Ailuropoda melanoleuca
ENSAMEG00000003872
I
0.814
ZNF143
Felis catus
ENSFCAG00000002342
I
0.814
ENSAPLG00000002385
Anas platyrhynchos
ENSAPLG00000002385
I
0.813
Afo_R014591
Aptenodytes forsteri
Afo_R014591
I
0.813
ZNF143
Sorex araneus
ENSSARG00000007780
I
0.813
ZNF143
Gallus gallus
ENSGALG00000005787
I
0.813
ZNF143
Ochotona princeps
ENSOPRG00000005466
I
0.813
ZNF143
Anolis carolinensis
ENSACAG00000009338
I
0.813
ZNF143
Oryctolagus cuniculus
ENSOCUG00000005226
I
0.813
ENSFALG00000000985
Ficedula albicollis
ENSFALG00000000985
I
0.813
Zfp143
Mus musculus
ENSMUSG00000061079
D
0.813
Tal_R001092
Tyto alba
Tal_R001092
I
0.813
ENSMEUG00000003014
Macropus eugenii
ENSMEUG00000003014
I
0.813
Zfp143
Rattus norvegicus
ENSRNOG00000010087
I
0.813
Aan_R006576
Calypte anna
Aan_R006576
I
0.813
ZNF143
Meleagris gallopavo
ENSMGAG00000006206
I
0.813
Brh_R005520
Buceros rhinoceros
Brh_R005520
I
0.813
ENSTGUG00000008153
Taeniopygia guttata
ENSTGUG00000008153
I
0.813
ZNF143
Myotis lucifugus
ENSMLUG00000000213
I
0.813
Gfo_R011843
Geospiza fortis
Gfo_R011843
I
0.813
znf143.S
Xenopus laevis
XB-GENE-1012509
I
0.812
Ogr18895
Ophisaurus gracilis
Ogr18895
I
0.811
ENSOARG00000012477
Ovis aries
ENSOARG00000012477
I
0.811
ZNF143
Tursiops truncatus
ENSTTRG00000015353
I
0.811
ENSP00000379847-D1
Bos grunniens
ENSP00000379847-D1
I
0.811
ZNF143
Ornithorhynchus anatinus
ENSOANG00000005853
I
0.810
ENSCSAG00000004520
Chlorocebus sabaeus
ENSCSAG00000004520
I
0.809
Pvit_03784
Pogona vitticeps
Pvit_03784
I
0.806
ENSSTOG00000009647
Ictidomys tridecemlineatus
ENSSTOG00000009647
I
0.806
ENSLACG00000017669
Latimeria chalumnae
ENSLACG00000017669
I
0.804
Myotis_brandtii_ZNF143_10021171
Myotis brandtii
Myotis_brandtii_ZNF143_10021171
I
0.803
ENSLOCG00000011655
Lepisosteus oculatus
ENSLOCG00000011655
I
0.779
Sakowv30036637m.g
Saccoglossus kowalevskii
Sakowv30036637m.g
I
0.776
Sakowv30044960m.g
Saccoglossus kowalevskii
Sakowv30044960m.g
I
0.776
znf76
Danio rerio
ENSDARG00000013279
I
0.773
Ocbimv22038914m.g
Octopus bimaculoides
Ocbimv22038914m.g
I
0.771
SMAR015659
Strigamia maritima
SMAR015659
I
0.769
LotgiG222832
Lottia gigantea
LotgiG222832
I
0.769
Cmyd_10011173
Chelonia mydas
Cmyd_10011173
I
0.769
ENSPSIG00000005652
Pelodiscus sinensis
ENSPSIG00000005652
I
0.769
Afo_R002092
Aptenodytes forsteri
Afo_R002092
I
0.769
Tal_R002540
Tyto alba
Tal_R002540
I
0.768
ENSFALG00000003698
Ficedula albicollis
ENSFALG00000003698
I
0.767
Gfo_R002960
Geospiza fortis
Gfo_R002960
I
0.767
ZNF76
Taeniopygia guttata
ENSTGUG00000001745
I
0.767
Alligator_sinensis_CCG020455.1
Alligator sinensis
Alligator_sinensis_CCG020455.1
I
0.767
ENSP00000363064
Macaca fascicularis
ENSP00000363064
I
0.766
Myotis_brandtii_ZNF76_10017771
Myotis brandtii
Myotis_brandtii_ZNF76_10017771
I
0.766
ENSBTAP00000008112-D1
Bos grunniens
ENSBTAP00000008112-D1
I
0.766
ZNF76
Tursiops truncatus
ENSTTRG00000009380
I
0.766
ENSOPRG00000009136
Ochotona princeps
ENSOPRG00000009136
I
0.766
ZNF76
Felis catus
ENSFCAG00000005893
I
0.766
ZNF76
Equus caballus
ENSECAG00000014843
I
0.766
ZNF76
Homo sapiens
ENSG00000065029
D
0.766
ZNF76
Gorilla gorilla
ENSGGOG00000014188
I
0.766
ZNF76
Loxodonta africana
ENSLAFG00000026071
I
0.766
ENSAMEG00000000752
Ailuropoda melanoleuca
ENSAMEG00000000752
I
0.766
ZNF76
Dasypus novemcinctus
ENSDNOG00000015856
I
0.766
ENSCSAG00000009955
Chlorocebus sabaeus
ENSCSAG00000009955
I
0.766
ZNF76
Canis familiaris
ENSCAFG00000001304
I
0.766
ZNF76
Bos taurus
ENSBTAG00000006170
I
0.766
ZNF76
Choloepus hoffmanni
ENSCHOG00000003197
I
0.766
ZNF76
Callithrix jacchus
ENSCJAG00000015519
I
0.766
ZNF76
Cavia porcellus
ENSCPOG00000007381
I
0.766
ENSSTOG00000000256
Ictidomys tridecemlineatus
ENSSTOG00000000256
I
0.766
ZNF76
Myotis lucifugus
ENSMLUG00000008610
I
0.766
ZNF76
Pan troglodytes
ENSPTRG00000018080
I
0.766
ENSPPYG00000016525
Pongo abelii
ENSPPYG00000016525
I
0.766
ZNF76
Pteropus vampyrus
ENSPVAG00000008041
I
0.766
Zfp523
Rattus norvegicus
ENSRNOG00000000501
I
0.766
ZNF76
Sus scrofa
ENSSSCG00000001537
I
0.766
ENSSHAG00000009934
Sarcophilus harrisii
ENSSHAG00000009934
I
0.766
ZNF76
Macaca mulatta
ENSMMUG00000023559
I
0.766
ENSPANG00000021154
Papio anubis
ENSPANG00000021154
I
0.766
ENSMPUG00000003522
Mustela putorius furo
ENSMPUG00000003522
I
0.766
ZNF76
Monodelphis domestica
ENSMODG00000013806
I
0.766
Zfp523
Mus musculus
ENSMUSG00000024220
I
0.766
ZNF76
Oryctolagus cuniculus
ENSOCUG00000015630
I
0.766
ZNF76
Otolemur garnettii
ENSOGAG00000002935
I
0.766
BGLB001048
Biomphalaria glabrata
BGLB001048
I
0.765
ENSAMXG00000008869
Astyanax mexicanus
ENSAMXG00000008869
I
0.765
estExt_fgenesh2_pg.C_1970081
Branchiostoma floridae
estExt_fgenesh2_pg.C_1970081
I
0.758