CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30044960m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30044960m.g
T142510_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.783
0.857
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.783
0.857
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.783
0.857
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.783
0.857
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.779
0.870
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.779
0.863
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.779
0.863
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.779
0.863
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.779
0.863
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.779
0.863
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.779
0.863
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.779
0.863
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23920362_peptide
C2H2 ZF
251
275
FRCGHDGCGRMYTTAHHLKVHERAH
23920362_peptide
C2H2 ZF
281
305
YKCEHPGCGKAFATGYGLKSHTRVH
23920362_peptide
C2H2 ZF
311
335
YKCPEESCQKSFKTSGDLQKHVRTH
23920362_peptide
C2H2 ZF
341
365
FKCPFEGCDRAFTTSNIRKVHIRTH
23920362_peptide
C2H2 ZF
371
395
YICREDGCGRAFASATNYKNHMRIH
23920362_peptide
C2H2 ZF
401
425
YVCTVAGCGKRFTEYSSLYKHHVVH
23920362_peptide
C2H2 ZF
431
454
YICNHCGKTYRQTSTLAMHKRTAH
23920363_peptide
C2H2 ZF
251
275
FRCGHDGCGRMYTTAHHLKVHERAH
23920363_peptide
C2H2 ZF
281
305
YKCEHPGCGKAFATGYGLKSHTRVH
23920363_peptide
C2H2 ZF
311
335
YKCPEESCQKSFKTSGDLQKHVRTH
23920363_peptide
C2H2 ZF
341
365
FKCPFEGCDRAFTTSNIRKVHIRTH
23920363_peptide
C2H2 ZF
371
395
YICREDGCGRAFASATNYKNHMRIH
23920363_peptide
C2H2 ZF
401
425
YVCTVAGCGKRFTEYSSLYKHHVVH
23920363_peptide
C2H2 ZF
431
454
YICNHCGKTYRQTSTLAMHKRTAH
23920364_peptide
C2H2 ZF
251
275
FRCGHDGCGRMYTTAHHLKVHERAH
23920364_peptide
C2H2 ZF
281
305
YKCEHPGCGKAFATGYGLKSHTRVH
23920364_peptide
C2H2 ZF
311
335
YKCPEESCQKSFKTSGDLQKHVRTH
23920364_peptide
C2H2 ZF
341
365
FKCPFEGCDRAFTTSNIRKVHIRTH
23920364_peptide
C2H2 ZF
371
395
YICREDGCGRAFASATNYKNHMRIH
23920364_peptide
C2H2 ZF
401
425
YVCTVAGCGKRFTEYSSLYKHHVVH
23920364_peptide
C2H2 ZF
431
454
YICNHCGKTYRQTSTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30036637m.g
Saccoglossus kowalevskii
Sakowv30036637m.g
I
0.827
SMAR015659
Strigamia maritima
SMAR015659
I
0.800
ENSLOCG00000011655
Lepisosteus oculatus
ENSLOCG00000011655
I
0.796
Ocbimv22038914m.g
Octopus bimaculoides
Ocbimv22038914m.g
I
0.794
estExt_fgenesh2_pg.C_1970081
Branchiostoma floridae
estExt_fgenesh2_pg.C_1970081
I
0.794
LotgiG222832
Lottia gigantea
LotgiG222832
I
0.790
znf76
Danio rerio
ENSDARG00000013279
I
0.785
ENSFALG00000003698
Ficedula albicollis
ENSFALG00000003698
I
0.785
ZNF76
Taeniopygia guttata
ENSTGUG00000001745
I
0.785
Gfo_R002960
Geospiza fortis
Gfo_R002960
I
0.785
Afo_R002092
Aptenodytes forsteri
Afo_R002092
I
0.784
Cmyd_10011173
Chelonia mydas
Cmyd_10011173
I
0.784
Alligator_sinensis_CCG020455.1
Alligator sinensis
Alligator_sinensis_CCG020455.1
I
0.784
ENSPSIG00000005652
Pelodiscus sinensis
ENSPSIG00000005652
I
0.784
ZNF76
Tursiops truncatus
ENSTTRG00000009380
I
0.783
ZNF76
Oryctolagus cuniculus
ENSOCUG00000015630
I
0.783
Zfp523
Rattus norvegicus
ENSRNOG00000000501
I
0.783
ZNF76
Loxodonta africana
ENSLAFG00000026071
I
0.783
ZNF76
Bos taurus
ENSBTAG00000006170
I
0.783
Myotis_brandtii_ZNF76_10017771
Myotis brandtii
Myotis_brandtii_ZNF76_10017771
I
0.783
ZNF76
Myotis lucifugus
ENSMLUG00000008610
I
0.783
ENSAMEG00000000752
Ailuropoda melanoleuca
ENSAMEG00000000752
I
0.783
ZNF76
Sus scrofa
ENSSSCG00000001537
I
0.783
Zfp523
Mus musculus
ENSMUSG00000024220
I
0.783
ENSSHAG00000009934
Sarcophilus harrisii
ENSSHAG00000009934
I
0.783
ENSMPUG00000003522
Mustela putorius furo
ENSMPUG00000003522
I
0.783
ZNF76
Monodelphis domestica
ENSMODG00000013806
I
0.783
ZNF76
Macaca mulatta
ENSMMUG00000023559
I
0.783
ENSSTOG00000000256
Ictidomys tridecemlineatus
ENSSTOG00000000256
I
0.783
ZNF76
Cavia porcellus
ENSCPOG00000007381
I
0.783
ENSPPYG00000016525
Pongo abelii
ENSPPYG00000016525
I
0.783
ENSBTAP00000008112-D1
Bos grunniens
ENSBTAP00000008112-D1
I
0.783
ZNF76
Choloepus hoffmanni
ENSCHOG00000003197
I
0.783
ENSOPRG00000009136
Ochotona princeps
ENSOPRG00000009136
I
0.783
ZNF76
Equus caballus
ENSECAG00000014843
I
0.783
ZNF76
Dasypus novemcinctus
ENSDNOG00000015856
I
0.783
ENSCSAG00000009955
Chlorocebus sabaeus
ENSCSAG00000009955
I
0.783
ZNF76
Callithrix jacchus
ENSCJAG00000015519
I
0.783
ENSP00000363064
Macaca fascicularis
ENSP00000363064
I
0.783
ZNF76
Gorilla gorilla
ENSGGOG00000014188
I
0.783
ENSPANG00000021154
Papio anubis
ENSPANG00000021154
I
0.783
ZNF76
Pan troglodytes
ENSPTRG00000018080
I
0.783
ZNF76
Pteropus vampyrus
ENSPVAG00000008041
I
0.783
ZNF76
Canis familiaris
ENSCAFG00000001304
I
0.783
Tal_R002540
Tyto alba
Tal_R002540
I
0.783
ZNF76
Homo sapiens
ENSG00000065029
D
0.783
ZNF76
Felis catus
ENSFCAG00000005893
I
0.783
ZNF76
Otolemur garnettii
ENSOGAG00000002935
I
0.782
Zfp143
Rattus norvegicus
ENSRNOG00000010087
I
0.779
ZNF143
Pan troglodytes
ENSPTRG00000003349
I
0.779
ENSPSIG00000009683
Pelodiscus sinensis
ENSPSIG00000009683
I
0.779
Aan_R006576
Calypte anna
Aan_R006576
I
0.779
ENSP00000379847
Macaca fascicularis
ENSP00000379847
I
0.779
ENSP00000379847-D1
Bos grunniens
ENSP00000379847-D1
I
0.779
Gfo_R011843
Geospiza fortis
Gfo_R011843
I
0.779
Pvit_03784
Pogona vitticeps
Pvit_03784
I
0.779
Tal_R001092
Tyto alba
Tal_R001092
I
0.779
Brh_R005520
Buceros rhinoceros
Brh_R005520
I
0.779
Alligator_sinensis_CCG018668.1
Alligator sinensis
Alligator_sinensis_CCG018668.1
I
0.779
ENSTGUG00000008153
Taeniopygia guttata
ENSTGUG00000008153
I
0.779
ENSTSYG00000004324
Tarsius syrichta
ENSTSYG00000004324
I
0.779
ZNF143
Tursiops truncatus
ENSTTRG00000015353
I
0.779
Afo_R014591
Aptenodytes forsteri
Afo_R014591
I
0.779
ZNF143
Sorex araneus
ENSSARG00000007780
I
0.779
ENSOARG00000012477
Ovis aries
ENSOARG00000012477
I
0.779
ZNF143
Callithrix jacchus
ENSCJAG00000011327
I
0.779
ENSPPYG00000003495
Pongo abelii
ENSPPYG00000003495
I
0.779
ENSMEUG00000003014
Macropus eugenii
ENSMEUG00000003014
I
0.779
ZNF143
Meleagris gallopavo
ENSMGAG00000006206
I
0.779
ZNF143
Canis familiaris
ENSCAFG00000007373
I
0.779
ZNF143
Loxodonta africana
ENSLAFG00000004487
I
0.779
ZNF143
Cavia porcellus
ENSCPOG00000003109
I
0.779
ZNF143
Felis catus
ENSFCAG00000002342
I
0.779
ENSFALG00000000985
Ficedula albicollis
ENSFALG00000000985
I
0.779
ZNF143
Homo sapiens
ENSG00000166478
D
0.779
ZNF143
Equus caballus
ENSECAG00000018889
I
0.779
ZNF143
Gallus gallus
ENSGALG00000005787
I
0.779
ZNF143
Erinaceus europaeus
ENSEEUG00000000955
I
0.779
ZNF143
Microcebus murinus
ENSMICG00000004353
I
0.779
ZNF143
Oryctolagus cuniculus
ENSOCUG00000005226
I
0.779
ENSPANG00000002501
Papio anubis
ENSPANG00000002501
I
0.779
ZNF143
Otolemur garnettii
ENSOGAG00000011518
I
0.779
ZNF143
Anolis carolinensis
ENSACAG00000009338
I
0.779
ENSAMEG00000003872
Ailuropoda melanoleuca
ENSAMEG00000003872
I
0.779
Zfp143
Mus musculus
ENSMUSG00000061079
D
0.779
ENSAPLG00000002385
Anas platyrhynchos
ENSAPLG00000002385
I
0.779
ZNF143
Macaca mulatta
ENSMMUG00000008758
I
0.779
ZNF143
Monodelphis domestica
ENSMODG00000007909
I
0.779
ENSMPUG00000012796
Mustela putorius furo
ENSMPUG00000012796
I
0.779
ZNF143
Ochotona princeps
ENSOPRG00000005466
I
0.779
ENSAMXG00000008869
Astyanax mexicanus
ENSAMXG00000008869
I
0.778
znf143
Xenopus tropicalis
XB-GENE-1012504
I
0.778
AAH73068
Xenopus laevis
AAH73068
I
0.778
ENSXMAG00000005152
Xiphophorus maculatus
ENSXMAG00000005152
I
0.778
ENSLOCG00000003619
Lepisosteus oculatus
ENSLOCG00000003619
I
0.778
ZNF143
Myotis lucifugus
ENSMLUG00000000213
I
0.778
ENSLACG00000017669
Latimeria chalumnae
ENSLACG00000017669
I
0.778
ENSGMOG00000001888
Gadus morhua
ENSGMOG00000001888
I
0.778
ENSPFOG00000008911
Poecilia formosa
ENSPFOG00000008911
I
0.778
ZNF143
Ornithorhynchus anatinus
ENSOANG00000005853
I
0.777
znf143.S
Xenopus laevis
XB-GENE-1012509
I
0.776
znf143
Takifugu rubripes
ENSTRUG00000009324
I
0.776
znf143b
Danio rerio
ENSDARG00000041581
I
0.776
znf143b
Gasterosteus aculeatus
ENSGACG00000009776
I
0.776
znf143b
Tetraodon nigroviridis
ENSTNIG00000013739
I
0.776
ENSONIG00000015524
Oreochromis niloticus
ENSONIG00000015524
I
0.775
Ogr18895
Ophisaurus gracilis
Ogr18895
I
0.775
ENSAMXG00000003833
Astyanax mexicanus
ENSAMXG00000003833
I
0.775
Myotis_brandtii_ZNF143_10021171
Myotis brandtii
Myotis_brandtii_ZNF143_10021171
I
0.775
ENSCSAG00000004520
Chlorocebus sabaeus
ENSCSAG00000004520
I
0.774
ENSSTOG00000009647
Ictidomys tridecemlineatus
ENSSTOG00000009647
I
0.773
BGLB001048
Biomphalaria glabrata
BGLB001048
I
0.769
znf143b
Oryzias latipes
ENSORLG00000001130
I
0.769
ENSAPLG00000005226
Anas platyrhynchos
ENSAPLG00000005226
I
0.769