Sb01g021480 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb01g021480 T128201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
id1
M02672_2.00 		Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA		 SELEX
Mathelier et al.(2014)
MA0120.1 		0.803 0.976
id1
M10380_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ID1_01 		0.803 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g021480.1 C2H2 ZF 162 183
Sb01g021480.1 C2H2 ZF 184 208

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si036003m.g Setaria italica Si036003m.g I 0.827
id1 Zea mays GRMZM2G011357 D 0.803
OMERI10G07530 Oryza meridionalis OMERI10G07530 I 0.782
SapurV1A.0444s0180 Salix purpurea SapurV1A.0444s0180 I 0.781
Traes_4BL_38E55D7B4 Triticum aestivum Traes_4BL_38E55D7B4 I 0.773
ORGLA02G0157900 Oryza glaberrima ORGLA02G0157900 I 0.768
TRIUR3_32694 Triticum urartu TRIUR3_32694 I 0.768
OPUNC02G16560 Oryza punctata OPUNC02G16560 I 0.768
ONIVA02G20290 Oryza nivara ONIVA02G20290 I 0.768
Traes_4DL_DF1F43E16 Triticum aestivum Traes_4DL_DF1F43E16 I 0.768
BGIOSGA006371 Oryza indica BGIOSGA006371 I 0.768
Sb04g021440 Sorghum bicolor Sb04g021440 I 0.768
Si019690m.g Setaria italica Si019690m.g I 0.768
Traes_4AS_F7A905B43 Triticum aestivum Traes_4AS_F7A905B43 I 0.768
OS02G0518500 Oryza sativa OS02G0518500 I 0.768
OMERI02G18510 Oryza meridionalis OMERI02G18510 I 0.768
ORUFI02G19290 Oryza rufipogon ORUFI02G19290 I 0.768
OLONG_013811 Oryza longistaminata OLONG_013811 I 0.768
LPERR02G14730 Leersia perrieri LPERR02G14730 I 0.768
GRMZM2G320287 Zea mays GRMZM2G320287 I 0.768
F775_04344 Aegilops tauschii F775_04344 I 0.768
BRADI3G44520 Brachypodium distachyon BRADI3G44520 I 0.768
Pavir.Aa01904 Panicum virgatum Pavir.Aa01904 I 0.768
Pavir.Ab01787 Panicum virgatum Pavir.Ab01787 I 0.768
OB02G26130 Oryza brachyantha OB02G26130 I 0.768
OGLUM02G18620 Oryza glumaepatula OGLUM02G18620 I 0.768
OBART02G18320 Oryza barthii OBART02G18320 I 0.768
Solyc06g075250.2 Solanum lycopersicum Solyc06g075250.2 I 0.767
PK25985.1 Cannabis sativa PK25985.1 I 0.767
Bostr.2983s0191 Boechera stricta Bostr.2983s0191 I 0.767
AtIDD12 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6003159 I 0.767
Cagra.0635s0013 Capsella grandiflora Cagra.0635s0013 I 0.767
Carubv10001008m.g Capsella rubella Carubv10001008m.g I 0.767
PGSC0003DMG400003372 Solanum tuberosum PGSC0003DMG400003372 I 0.767
ORUFI10G10700 Oryza rufipogon ORUFI10G10700 N 0.764
LPERR10G07370 Leersia perrieri LPERR10G07370 N 0.764
OBART10G10130 Oryza barthii OBART10G10130 N 0.764
ONIVA10G09540 Oryza nivara ONIVA10G09540 N 0.764
OPUNC10G08850 Oryza punctata OPUNC10G08850 N 0.764
ORGLA10G0088000 Oryza glaberrima ORGLA10G0088000 N 0.764
OGLUM10G10050 Oryza glumaepatula OGLUM10G10050 N 0.764
OS10G0419200 Oryza sativa OS10G0419200 N 0.764
BGIOSGA031911 Oryza indica BGIOSGA031911 N 0.764
Gorai.005G198100 Gossypium raimondii Gorai.005G198100 I 0.762
GLYMA11G15950 Glycine max GLYMA11G15950 I 0.762
cassava21529.m1 Manihot esculenta cassava21529.m1 I 0.762
VIT_09s0054g01820 Vitis vinifera VIT_09s0054g01820 I 0.762
POPTR_0327s00220 Populus trichocarpa POPTR_0327s00220 I 0.762
30128.m008580 Ricinus communis 30128.m008580 I 0.762
TCM_008261 Theobroma cacao TCM_008261 I 0.762
POPTR_0001s12770 Populus trichocarpa POPTR_0001s12770 I 0.762
MTR_2g093960 Medicago truncatula MTR_2g093960 I 0.758
Eucgr.B03566 Eucalyptus grandis Eucgr.B03566 I 0.756