Bo3g141510 (Brassica oleracea)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 Bo3g141510 T164291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.879 0.879
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g141510.1 CSD 8 74

Links

Other CSD family TFs
Other Brassica oleracea TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CSP4 Arabidopsis thaliana AT2G21060 D 0.879
CSP2 Arabidopsis thaliana AT4G38680 I 0.864
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.864
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.848
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.848
GRP2 Arabidopsis lyrata scaffold_700059.1 I 0.848
Bo4g145670 Brassica oleracea Bo4g145670 I 0.833
Bra030325 Brassica rapa Bra030325 I 0.818
Bo8g102040 Brassica oleracea Bo8g102040 I 0.788
Bra031159 Brassica rapa Bra031159 I 0.788
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.742
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.742
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.742
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.727
Bo7g049880 Brassica oleracea Bo7g049880 I 0.727
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.727
PK26692.1 Cannabis sativa PK26692.1 I 0.723
Bo2g119240 Brassica oleracea Bo2g119240 I 0.714
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.712
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.712
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.712
Pm020837 Prunus mume Pm020837 I 0.712
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.712
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.712
mgf015980m Mimulus guttatus mgf015980m I 0.712
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.707
Lus10034487.g Linum usitatissimum Lus10034487.g I 0.702