CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001371201
(
Strongylus vulgaris
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
SVUK_0001371201
T174409_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.433
0.433
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.433
0.433
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.433
0.433
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001371201-mRNA-1
E2F
1
19
MEALDAMSKTNKSYYRWHG
SVUK_0001371201-mRNA-1
E2F
29
106
DLQKEAVEERLPERVLRVEQAMCSFTELSPGSRNFGMKEVVGRCRRLYDIANVLVALGLIKKVHYLFGTKKIPLFVYC
Links
Other
E2F
family TFs
Other
Strongylus vulgaris
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g1818
Steinernema scapterisci
L892_g1818
I
0.687
L889_g28422
Steinernema feltiae
L889_g28422
I
0.687
L596_g12895
Steinernema carpocapsae
L596_g12895
I
0.672
CGOC_0000227901
Cylicostephanus goldi
CGOC_0000227901
N
0.627
ANCCAN_04600
Ancylostoma caninum
ANCCAN_04600
I
0.627
HCOI01892600
Haemonchus contortus
HCOI01892600
I
0.627
HPBE_0000610601
Heligmosomoides bakeri
HPBE_0000610601
I
0.627
TELCIR_03927
Teladorsagia circumcincta
TELCIR_03927
I
0.627
DICVIV_01764
Dictyocaulus viviparus
DICVIV_01764
I
0.612
ACAC_0000024001
Angiostrongylus cantonensis
ACAC_0000024001
I
0.612
BXY_1693900
Bursaphelenchus xylophilus
BXY_1693900
I
0.612
NECAME_17546
Necator americanus
NECAME_17546
N
0.597
CJA26768
Caenorhabditis japonica
CJA26768
I
0.582
SMUV_0000434101
Syphacia muris
SMUV_0000434101
I
0.582
scaffold884-EXSNAP2012.1
Pristionchus exspectatus
scaffold884-EXSNAP2012.1
I
0.582
L898_g3621
Steinernema monticolum
L898_g3621
I
0.582
scaffold51-EXSNAP2012.35
Pristionchus exspectatus
scaffold51-EXSNAP2012.35
I
0.582
PPA21298
Pristionchus pacificus
PPA21298
I
0.582
efl-3
Caenorhabditis elegans
WBGene00009899
I
0.582
ALUE_0000773501
Ascaris lumbricoides
ALUE_0000773501
I
0.567
TCNE_0000873901
Toxocara canis
TCNE_0000873901
I
0.567
ASU_04096
Ascaris suum
ASU_04096
I
0.567
Minc05731
Meloidogyne incognita
Minc05731
I
0.463
Minc04041
Meloidogyne incognita
Minc04041
I
0.463
maker-nMf.1.1.scaf01659-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf01659-augustus-gene-0.9
I
0.463
MhA1_Contig130.frz3.gene44
Meloidogyne hapla
MhA1_Contig130.frz3.gene44
I
0.463
HelroG187766
Helobdella robusta
HelroG187766
I
0.448
Pvit_10252
Pogona vitticeps
Pvit_10252
I
0.448
ANCCEY_00760
Ancylostoma ceylanicum
ANCCEY_00760
N
0.448
DME_0000727201
Dracunculus medinensis
DME_0000727201
I
0.448
Brh_R011115
Buceros rhinoceros
Brh_R011115
I
0.433
Alligator_sinensis_CCG013028.2
Alligator sinensis
Alligator_sinensis_CCG013028.2
I
0.433
ANCDUO_15678
Ancylostoma duodenale
ANCDUO_15678
N
0.433
Brh_R005316
Buceros rhinoceros
Brh_R005316
I
0.433
Alligator_sinensis_CCG013467.1
Alligator sinensis
Alligator_sinensis_CCG013467.1
I
0.433
e2f8.L
Xenopus laevis
XB-GENE-1219153
I
0.433
Cmyd_10011734
Chelonia mydas
Cmyd_10011734
I
0.433
Pvit_06409
Pogona vitticeps
Pvit_06409
I
0.433
e2f7.L
Xenopus laevis
XB-GENE-1018449
I
0.433
Myotis_brandtii_E2F8_10018668
Myotis brandtii
Myotis_brandtii_E2F8_10018668
I
0.433
Gfo_R003976
Geospiza fortis
Gfo_R003976
I
0.433
ENSBTAP00000023190-D1
Bos grunniens
ENSBTAP00000023190-D1
I
0.433
Tal_R000495
Tyto alba
Tal_R000495
I
0.433
Afo_R006642
Aptenodytes forsteri
Afo_R006642
I
0.433
E2F8
Homo sapiens
ENSG00000129173
D
0.433
E2F8
Felis catus
ENSFCAG00000010706
I
0.433
ENSFALG00000010433
Ficedula albicollis
ENSFALG00000010433
I
0.433
ENSGALG00000004023
Gallus gallus
ENSGALG00000004023
I
0.433
E2F8
Loxodonta africana
ENSLAFG00000022713
I
0.433
ENSMPUG00000013899
Mustela putorius furo
ENSMPUG00000013899
I
0.433
E2F8
Myotis lucifugus
ENSMLUG00000015592
I
0.433
ENSLOCG00000016279
Lepisosteus oculatus
ENSLOCG00000016279
I
0.433
E2F8
Erinaceus europaeus
ENSEEUG00000011472
I
0.433
E2f8
Dipodomys ordii
ENSDORG00000000040
I
0.433
ENSAMXG00000016864
Astyanax mexicanus
ENSAMXG00000016864
I
0.433
ENSAMEG00000017950
Ailuropoda melanoleuca
ENSAMEG00000017950
I
0.433
E2F8
Anolis carolinensis
ENSACAG00000015743
I
0.433
E2F8
Bos taurus
ENSBTAG00000017446
I
0.433
E2F8
Canis familiaris
ENSCAFG00000009431
I
0.433
E2F8
Dasypus novemcinctus
ENSDNOG00000003349
I
0.433
ENSCSAG00000005093
Chlorocebus sabaeus
ENSCSAG00000005093
I
0.433
E2F8
Cavia porcellus
ENSCPOG00000013766
I
0.433
E2f8
Mus musculus
ENSMUSG00000046179
I
0.433
ENSNLEG00000017803
Nomascus leucogenys
ENSNLEG00000017803
I
0.433
E2F7
Taeniopygia guttata
ENSTGUG00000007515
I
0.433
ENSSTOG00000008838
Ictidomys tridecemlineatus
ENSSTOG00000008838
I
0.433
E2F8
Sus scrofa
ENSSSCG00000013352
I
0.433
ENSTSYG00000007279
Tarsius syrichta
ENSTSYG00000007279
I
0.433
E2F8
Tursiops truncatus
ENSTTRG00000005707
I
0.433
Afo_R014077
Aptenodytes forsteri
Afo_R014077
I
0.433
Aan_R005623
Calypte anna
Aan_R005623
I
0.433
Thaps3973
Thalassiosira pseudonana
Thaps3973
I
0.433
E2F7
Sus scrofa
ENSSSCG00000000950
I
0.433
E2f8
Rattus norvegicus
ENSRNOG00000022537
I
0.433
E2F8
Oryctolagus cuniculus
ENSOCUG00000004485
I
0.433
ENSOARG00000008807
Ovis aries
ENSOARG00000008807
I
0.433
E2F8
Ornithorhynchus anatinus
ENSOANG00000011290
I
0.433
E2F8
Otolemur garnettii
ENSOGAG00000005774
I
0.433
ENSPPYG00000003424
Pongo abelii
ENSPPYG00000003424
I
0.433
E2F8
Pteropus vampyrus
ENSPVAG00000012522
I
0.433
E2F8
Pan troglodytes
ENSPTRG00000003435
I
0.433
ENSPSIG00000012629
Pelodiscus sinensis
ENSPSIG00000012629
I
0.433
Alligator_sinensis_CCG013028.1
Alligator sinensis
Alligator_sinensis_CCG013028.1
I
0.433