SVUK_0001371201 (Strongylus vulgaris)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 SVUK_0001371201 T174409_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.433 0.433
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.433 0.433
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.433 0.433
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001371201-mRNA-1 E2F 1 19
SVUK_0001371201-mRNA-1 E2F 29 106

Links

Other E2F family TFs
Other Strongylus vulgaris TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L892_g1818 Steinernema scapterisci L892_g1818 I 0.687
L889_g28422 Steinernema feltiae L889_g28422 I 0.687
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.672
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.627
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.627
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.627
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.627
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.627
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.612
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.612
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.612
NECAME_17546 Necator americanus NECAME_17546 N 0.597
CJA26768 Caenorhabditis japonica CJA26768 I 0.582
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.582
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.582
L898_g3621 Steinernema monticolum L898_g3621 I 0.582
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.582
PPA21298 Pristionchus pacificus PPA21298 I 0.582
efl-3 Caenorhabditis elegans WBGene00009899 I 0.582
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.567
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.567
ASU_04096 Ascaris suum ASU_04096 I 0.567
Minc05731 Meloidogyne incognita Minc05731 I 0.463
Minc04041 Meloidogyne incognita Minc04041 I 0.463
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.463
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.463
HelroG187766 Helobdella robusta HelroG187766 I 0.448
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.448
ANCCEY_00760 Ancylostoma ceylanicum ANCCEY_00760 N 0.448
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.448
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.433
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.433
ANCDUO_15678 Ancylostoma duodenale ANCDUO_15678 N 0.433
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.433
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.433
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.433
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.433
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.433
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.433
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.433
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.433
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.433
Tal_R000495 Tyto alba Tal_R000495 I 0.433
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.433
E2F8 Homo sapiens ENSG00000129173 D 0.433
E2F8 Felis catus ENSFCAG00000010706 I 0.433
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.433
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.433
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.433
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.433
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.433
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.433
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.433
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.433
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.433
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.433
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.433
E2F8 Bos taurus ENSBTAG00000017446 I 0.433
E2F8 Canis familiaris ENSCAFG00000009431 I 0.433
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.433
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.433
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.433
E2f8 Mus musculus ENSMUSG00000046179 I 0.433
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.433
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.433
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.433
E2F8 Sus scrofa ENSSSCG00000013352 I 0.433
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.433
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.433
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.433
Aan_R005623 Calypte anna Aan_R005623 I 0.433
Thaps3973 Thalassiosira pseudonana Thaps3973 I 0.433
E2F7 Sus scrofa ENSSSCG00000000950 I 0.433
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.433
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.433
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.433
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.433
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.433
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.433
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.433
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.433
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.433
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.433