maker-nMf.1.1.scaf01659-augustus-gene-0.9 (Meloidogyne floridensis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 maker-nMf.1.1.scaf01659-augustus-gene-0.9 T174323_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.444 0.444
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.444 0.444
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.444 0.444
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf01659-augustus-gene-0.9-mRNA-1 E2F 61 127
maker-nMf.1.1.scaf01659-augustus-gene-0.9-mRNA-1 E2F 206 284

Links

Other E2F family TFs
Other Meloidogyne floridensis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 1.000
Minc05731 Meloidogyne incognita Minc05731 I 1.000
Minc04041 Meloidogyne incognita Minc04041 I 1.000
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.992
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.754
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.752
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.744
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.744
efl-3 Caenorhabditis elegans WBGene00009899 I 0.739
CJA26768 Caenorhabditis japonica CJA26768 I 0.737
ASU_04096 Ascaris suum ASU_04096 I 0.729
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.729
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.728
L898_g3621 Steinernema monticolum L898_g3621 I 0.727
CRE01589 Caenorhabditis remanei CRE01589 I 0.726
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.726
L892_g1818 Steinernema scapterisci L892_g1818 I 0.722
CBN23380 Caenorhabditis brenneri CBN23380 I 0.719
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.714
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.713
L893_g19965 Steinernema glaseri L893_g19965 I 0.712
CBG00680 Caenorhabditis briggsae CBG00680 I 0.711
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.711
L889_g28422 Steinernema feltiae L889_g28422 I 0.707
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.704
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.704
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.692
PPA21298 Pristionchus pacificus PPA21298 I 0.687
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.684
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.662
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.630
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.625
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.571
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.571
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.568
LOAG_07147 Loa loa LOAG_07147 N 0.564
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.564
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.556
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.556
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.556
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.556
Bm4234 Brugia malayi Bm4234 N 0.549
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.493
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.474
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.463
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.449
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.449
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.444
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.444
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.444
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.444
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.441
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.441
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.436
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.436
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.436
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.436
E2f8 Mus musculus ENSMUSG00000046179 I 0.436
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.436
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.436
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.436
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.436
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.434
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.434
E2F8 Homo sapiens ENSG00000129173 D 0.434
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.434
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.434
e2f8 Oryzias latipes ENSORLG00000000786 I 0.434
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.434
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.434
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.434
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.434
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.434
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.429
LotgiG168338 Lottia gigantea LotgiG168338 I 0.429
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.429
NECAME_17546 Necator americanus NECAME_17546 N 0.429
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.429
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.429