CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TELCIR_22846
(
Teladorsagia circumcincta
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
TELCIR_22846
T174421_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.464
0.464
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.464
0.464
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.464
0.464
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.452
0.452
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.452
0.452
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.452
0.452
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.452
0.452
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.452
0.452
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.452
0.452
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_22846
E2F
38
106
KEKSLGLLCQRFLVAMNEETRVSSSREVHLETVARKMNVEKRRIYDIVNVMEALDAMSKTNKSYYRWHG
TELCIR_22846
E2F
195
213
GRNSLAQLCRRFLMVLLSN
Links
Other
E2F
family TFs
Other
Teladorsagia circumcincta
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g28422
Steinernema feltiae
L889_g28422
I
0.798
L892_g1818
Steinernema scapterisci
L892_g1818
I
0.798
OESDEN_14635
Oesophagostomum dentatum
OESDEN_14635
I
0.792
HPBE_0000610601
Heligmosomoides bakeri
HPBE_0000610601
I
0.622
HCOI01892600
Haemonchus contortus
HCOI01892600
I
0.615
TELCIR_03927
Teladorsagia circumcincta
TELCIR_03927
I
0.615
ANCCAN_04600
Ancylostoma caninum
ANCCAN_04600
I
0.607
ACAC_0000024001
Angiostrongylus cantonensis
ACAC_0000024001
I
0.607
DICVIV_01764
Dictyocaulus viviparus
DICVIV_01764
I
0.593
efl-3
Caenorhabditis elegans
WBGene00009899
I
0.582
CJA26768
Caenorhabditis japonica
CJA26768
I
0.567
CBN23380
Caenorhabditis brenneri
CBN23380
I
0.563
CRE01589
Caenorhabditis remanei
CRE01589
I
0.556
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
I
0.553
CBG00680
Caenorhabditis briggsae
CBG00680
I
0.548
Bm4234
Brugia malayi
Bm4234
N
0.536
ASU_04096
Ascaris suum
ASU_04096
I
0.519
ALUE_0000773501
Ascaris lumbricoides
ALUE_0000773501
I
0.519
TCNE_0000873901
Toxocara canis
TCNE_0000873901
I
0.515
LotgiG168338
Lottia gigantea
LotgiG168338
I
0.512
ASIM_0001001801
Anisakis simplex
ASIM_0001001801
I
0.511
CGOC_0000227901
Cylicostephanus goldi
CGOC_0000227901
N
0.508
SMUV_0000434101
Syphacia muris
SMUV_0000434101
I
0.504
scaffold884-EXSNAP2012.1
Pristionchus exspectatus
scaffold884-EXSNAP2012.1
I
0.496
L596_g12895
Steinernema carpocapsae
L596_g12895
I
0.493
PPA21298
Pristionchus pacificus
PPA21298
I
0.493
L893_g19965
Steinernema glaseri
L893_g19965
I
0.492
scaffold51-EXSNAP2012.35
Pristionchus exspectatus
scaffold51-EXSNAP2012.35
I
0.485
OESDEN_13289
Oesophagostomum dentatum
OESDEN_13289
I
0.481
Minc05731
Meloidogyne incognita
Minc05731
I
0.474
MhA1_Contig130.frz3.gene44
Meloidogyne hapla
MhA1_Contig130.frz3.gene44
I
0.474
Minc04041
Meloidogyne incognita
Minc04041
I
0.474
maker-nMf.1.1.scaf01659-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf01659-augustus-gene-0.9
I
0.474
Alligator_sinensis_CCG013028.2
Alligator sinensis
Alligator_sinensis_CCG013028.2
I
0.464
Alligator_sinensis_CCG013028.1
Alligator sinensis
Alligator_sinensis_CCG013028.1
I
0.464
ENSPMAG00000001858
Petromyzon marinus
ENSPMAG00000001858
I
0.464
Pvit_10252
Pogona vitticeps
Pvit_10252
I
0.464
E2f8
Mus musculus
ENSMUSG00000046179
I
0.464
E2F8
Gorilla gorilla
ENSGGOG00000011430
I
0.464
L898_g3621
Steinernema monticolum
L898_g3621
I
0.455
gw1.8.144.1
Ostreococcus RCC809
gw1.8.144.1
I
0.452
ENSFALG00000010433
Ficedula albicollis
ENSFALG00000010433
I
0.452
ENSOANG00000007449
Ornithorhynchus anatinus
ENSOANG00000007449
I
0.452
E2F7
Choloepus hoffmanni
ENSCHOG00000004785
I
0.452
E2F8
Bos taurus
ENSBTAG00000017446
I
0.452
E2F8
Anolis carolinensis
ENSACAG00000015743
I
0.452
ENSSHAG00000002919
Sarcophilus harrisii
ENSSHAG00000002919
I
0.452
E2F7
Oryctolagus cuniculus
ENSOCUG00000004932
I
0.452
ENSBTAP00000023190-D1
Bos grunniens
ENSBTAP00000023190-D1
I
0.452
BXY_1693900
Bursaphelenchus xylophilus
BXY_1693900
I
0.449
AMSG_04376
Thecamonas trahens
AMSG_04376
N
0.440
CMT433C
Cyanidioschyzon merolae
CMT433C
I
0.440
ENSLACG00000014031
Latimeria chalumnae
ENSLACG00000014031
I
0.440
nAv.1.0.1.g09262
Acanthocheilonema viteae
nAv.1.0.1.g09262
N
0.440
L798_00191
Zootermopsis nevadensis
L798_00191
I
0.440
e2f7.L
Xenopus laevis
XB-GENE-1018449
I
0.429
MTR_4g106540
Medicago truncatula
MTR_4g106540
I
0.429
TriadG6275
Trichoplax adhaerens
TriadG6275
I
0.429