efl-3 (Caenorhabditis elegans)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 WBGene00009899 T173582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.463 0.463
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.463 0.463
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.463 0.463
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.455 0.455
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.455 0.455
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.455 0.455
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.455 0.455
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.455 0.455
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.455 0.455
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F49E12.6 E2F 96 164
F49E12.6 E2F 257 338

Links

Other E2F family TFs
Other Caenorhabditis elegans TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA26768 Caenorhabditis japonica CJA26768 I 0.970
CBN23380 Caenorhabditis brenneri CBN23380 I 0.963
CRE01589 Caenorhabditis remanei CRE01589 I 0.956
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.955
CBG00680 Caenorhabditis briggsae CBG00680 I 0.948
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.940
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.940
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.910
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.910
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.903
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.813
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.813
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.807
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.806
PPA21298 Pristionchus pacificus PPA21298 I 0.784
ASU_04096 Ascaris suum ASU_04096 I 0.776
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.776
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.776
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.776
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.769
L893_g19965 Steinernema glaseri L893_g19965 I 0.765
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.763
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.763
L889_g28422 Steinernema feltiae L889_g28422 I 0.761
L892_g1818 Steinernema scapterisci L892_g1818 I 0.761
Minc05731 Meloidogyne incognita Minc05731 I 0.739
Minc04041 Meloidogyne incognita Minc04041 I 0.739
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.739
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.739
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.731
L898_g3621 Steinernema monticolum L898_g3621 I 0.724
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.687
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.612
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.597
LOAG_07147 Loa loa LOAG_07147 N 0.590
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.586
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.586
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.583
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.582
Bm4234 Brugia malayi Bm4234 N 0.582
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.582
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.582
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.582
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.552
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.530
NECAME_17546 Necator americanus NECAME_17546 N 0.507
ISCW021939 Ixodes scapularis ISCW021939 I 0.478
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.470
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.463
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.463
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.463
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.463
E2F8 Homo sapiens ENSG00000129173 D 0.463
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.463
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.463
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.463
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.463
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.463
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.463
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.463
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.463
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.463
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.463
Aan_R006648 Calypte anna Aan_R006648 I 0.456
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.456
NV16280 Nasonia vitripennis NV16280 I 0.456
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.456
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.456
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.456
Tal_R008430 Tyto alba Tal_R008430 I 0.456
XP_002942881 Xenopus tropicalis XP_002942881 I 0.456
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.456
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.456
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.456
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.455
Aan_R005623 Calypte anna Aan_R005623 I 0.455
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.455
Tal_R000495 Tyto alba Tal_R000495 I 0.455
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.455
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.455
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.455
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.455
E2F8 Sus scrofa ENSSSCG00000013352 I 0.455
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.455
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.455
LotgiG168338 Lottia gigantea LotgiG168338 I 0.455
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.455
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.455
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.455
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.455
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.455
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.455
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.455
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.455
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.455
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.455
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.455
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.455
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.455
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.455
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.455
E2F8 Felis catus ENSFCAG00000010706 I 0.455
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.455
E2f8 Mus musculus ENSMUSG00000046179 I 0.455
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.455
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.455
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.455
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.455
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.455
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.455
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.455
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.455
E2F7 Echinops telfairi ENSETEG00000014750 I 0.455
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.455
E2F7 Bos taurus ENSBTAG00000016931 I 0.455
E2F7 Canis familiaris ENSCAFG00000005718 I 0.455
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.455
E2F8 Canis familiaris ENSCAFG00000009431 I 0.455
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.455
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.455
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.455
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.455
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.449
CapteG198117 Capitella teleta CapteG198117 I 0.449
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.449
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.449
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.449
E2F7 Felis catus ENSFCAG00000010756 I 0.449
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.449
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.449
E2F7 Homo sapiens ENSG00000165891 D 0.449
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.449
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.449
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.449
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.449
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.449
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.449
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.449
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.449
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.449
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.449
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.449
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.449
E2F7 Sorex araneus ENSSARG00000004122 I 0.449
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.449
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.449
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.449
E2f7 Mus musculus ENSMUSG00000020185 D 0.449
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.449
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.449
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.449
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.449
E2F7 Sus scrofa ENSSSCG00000000950 I 0.448
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.448
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I 0.448
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.448
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.448
e2f8 Oryzias latipes ENSORLG00000000786 I 0.448
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.448
E2F7 Procavia capensis ENSPCAG00000000596 I 0.448
HelroG187766 Helobdella robusta HelroG187766 I 0.448
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.448
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.448
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.448
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.448
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.448
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.448
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.448
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.448
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.448
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.441
E2F8 Equus caballus ENSECAG00000016457 I 0.441
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.441
E2F8 Bos taurus ENSBTAG00000017446 I 0.440
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.440
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.440
E2F7 Meleagris gallopavo ENSMGAG00000010943 I 0.440
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I 0.440
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I 0.440
e2f8 Danio rerio ENSDARG00000057323 I 0.440
e2f7 Danio rerio ENSDARG00000008986 I 0.440
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.434
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.434
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I 0.434
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I 0.433
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.433
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.433
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.433
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.433
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I 0.433