POPTR_0006s08690 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0006s08690 T201201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s08690.1 GRAS 373 744

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.949
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.843
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.843
TCM_021920 Theobroma cacao TCM_021920 N 0.822
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.808
Pm002685 Prunus mume Pm002685 N 0.803
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.800
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.800
29767.m000200 Ricinus communis 29767.m000200 N 0.797
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.793
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.786
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.781
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.781
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.778
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.775
Cla018179 Citrullus lanatus Cla018179 N 0.773
Ca_21138 Cicer arietinum Ca_21138 N 0.773
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.770
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.768
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N 0.765
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.765
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.751
PK20526.1 Cannabis sativa PK20526.1 N 0.751
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.751
TCM_042705 Theobroma cacao TCM_042705 N 0.741
mgf011165m Mimulus guttatus mgf011165m N 0.738
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.735
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.730
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.729
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.727
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.727
SCL9 Arabidopsis thaliana AT2G37650 N 0.726
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.724
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.719
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.719
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.717
Si034417m.g Setaria italica Si034417m.g N 0.716
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.716
27568.m000253 Ricinus communis 27568.m000253 N 0.714
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.714
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.712
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.712
Bo3g031890 Brassica oleracea Bo3g031890 N 0.711
Bra000012 Brassica rapa Bra000012 N 0.708
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.708
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.705
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.705
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.705
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.703
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.703
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.703
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.703
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.703
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.703
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.703
OBART03G30260 Oryza barthii OBART03G30260 N 0.703
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.703
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.703
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700
OS03G0690600 Oryza sativa OS03G0690600 N 0.700
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.700