CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_13102
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_13102
T201882_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_13102
GRAS
222
301
PKQLLYECASALSDGNEVKASAMIDDLRQMVSIQGDPSERIAAYMVEGLAARMASSGKCIYKALKCKEPPSXXXXXXXXX
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.915
LjSGA_053605.1
Lotus japonicus
LjSGA_053605.1
N
0.887
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.775
GLYMA13G09220
Glycine max
GLYMA13G09220
N
0.775
GLYMA04G42090
Glycine max
GLYMA04G42090
N
0.775
MTR_3g089055
Medicago truncatula
MTR_3g089055
N
0.761
BGIOSGA000383
Oryza indica
BGIOSGA000383
N
0.746
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.746
OLONG_003002
Oryza longistaminata
OLONG_003002
N
0.746
ORUFI01G42800
Oryza rufipogon
ORUFI01G42800
N
0.746
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.732
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.732
POPTR_0002s07430
Populus trichocarpa
POPTR_0002s07430
N
0.732
Eucgr.F04276
Eucalyptus grandis
Eucgr.F04276
N
0.718
Bostr.25570s0024
Boechera stricta
Bostr.25570s0024
N
0.718
Cagra.1632s0036
Capsella grandiflora
Cagra.1632s0036
N
0.718
SCL1
Arabidopsis lyrata
fgenesh2_kg.1__2335__AT1G21450.1
N
0.718
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.718
Thhalv10007142m.g
Eutrema salsugineum
Thhalv10007142m.g
N
0.704
SapurV1A.0261s0120
Salix purpurea
SapurV1A.0261s0120
N
0.704
Pavir.Ea03635
Panicum virgatum
Pavir.Ea03635
N
0.704
Si000832m.g
Setaria italica
Si000832m.g
N
0.704
Pavir.J20385
Panicum virgatum
Pavir.J20385
N
0.704