POPTR_0002s07430 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0002s07430 T201175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s07430.1 GRAS 215 585

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.965
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.932
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.930
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.883
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.873
29648.m001919 Ricinus communis 29648.m001919 N 0.868
TCM_035362 Theobroma cacao TCM_035362 N 0.846
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.842
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.840
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.840
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.835
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.833
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.832
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.824
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.821
MDP0000727836 Malus domestica MDP0000727836 N 0.816
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.816
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.816
Pm022704 Prunus mume Pm022704 N 0.816
MDP0000859087 Malus domestica MDP0000859087 N 0.813
PK29476.1 Cannabis sativa PK29476.1 N 0.797
Ca_13101 Cicer arietinum Ca_13101 N 0.795
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.791
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.785
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.784
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.783
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.780
LjSGA_053605.1 Lotus japonicus LjSGA_053605.1 N 0.779
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.778
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.775
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.775
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.772
Ca_03920 Cicer arietinum Ca_03920 N 0.767
Cla015267 Citrullus lanatus Cla015267 N 0.759
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.757
mgf010500m Mimulus guttatus mgf010500m N 0.756
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.751
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.745
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.743
Bra017915 Brassica rapa Bra017915 N 0.743
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.740
SCL1 Arabidopsis thaliana AT1G21450 N 0.738
Bo5g034360 Brassica oleracea Bo5g034360 N 0.738
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.738
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.737
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.737
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.737
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.735
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.734
Ca_13102 Cicer arietinum Ca_13102 N 0.732
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.729
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.727
Bra012280 Brassica rapa Bra012280 N 0.720
Bo7g059410 Brassica oleracea Bo7g059410 N 0.717
BGIOSGA000383 Oryza indica BGIOSGA000383 N 0.708
OPUNC01G38160 Oryza punctata OPUNC01G38160 N 0.707
ORGLA01G0333300 Oryza glaberrima ORGLA01G0333300 N 0.705
OMERI01G36330 Oryza meridionalis OMERI01G36330 N 0.705
OLONG_003002 Oryza longistaminata OLONG_003002 N 0.705
OBART01G39420 Oryza barthii OBART01G39420 N 0.705
OGLUM01G43650 Oryza glumaepatula OGLUM01G43650 N 0.705
OS01G0881500 Oryza sativa OS01G0881500 N 0.702
ONIVA01G44280 Oryza nivara ONIVA01G44280 N 0.702
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N 0.702