CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.079150
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.079150
T202122_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.079150.1
GRAS
200
570
PRQMLSECAFAISEENYGEASAMIEQLRCVVSIQGDPSQRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFRAIASNASEVTPSMLASKPGEALIVNFAFLLHHMPDESVSTVNQRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYDSLDATLPRDSQDRINVESQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSQNVTDPIRKLIEEYCNRFKMYEEMGTLHFGWEEKSLIVTSAWR
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla015267
Citrullus lanatus
Cla015267
N
0.951
TCM_035362
Theobroma cacao
TCM_035362
N
0.791
MDP0000727836
Malus domestica
MDP0000727836
N
0.786
PRUPE_ppa003310mg
Prunus persica
PRUPE_ppa003310mg
N
0.780
Pm022704
Prunus mume
Pm022704
N
0.778
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.775
MDP0000859087
Malus domestica
MDP0000859087
N
0.775
POPTR_0002s07430
Populus trichocarpa
POPTR_0002s07430
N
0.775
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.772
GLYMA06G12701
Glycine max
GLYMA06G12701
N
0.767
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.767
cassava42388.valid.m1
Manihot esculenta
cassava42388.valid.m1
N
0.764
SapurV1A.0267s0240
Salix purpurea
SapurV1A.0267s0240
N
0.764
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.764
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.762
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.762
GLYMA04G42090
Glycine max
GLYMA04G42090
N
0.762
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.762
POPTR_0005s20890
Populus trichocarpa
POPTR_0005s20890
N
0.762
29648.m001919
Ricinus communis
29648.m001919
N
0.759
SapurV1A.0261s0120
Salix purpurea
SapurV1A.0261s0120
N
0.753
GLYMA13G09220
Glycine max
GLYMA13G09220
N
0.748
PK29476.1
Cannabis sativa
PK29476.1
N
0.748
MTR_3g089055
Medicago truncatula
MTR_3g089055
N
0.743
SCL1
Vitis vinifera
VIT_18s0001g15270
N
0.743
evm.TU.supercontig_26.96
Carica papaya
evm.TU.supercontig_26.96
N
0.740
Lus10029747.g
Linum usitatissimum
Lus10029747.g
N
0.737
Ca_03920
Cicer arietinum
Ca_03920
N
0.737
GLYMA14G27290
Glycine max
GLYMA14G27290
N
0.734
Eucgr.F04276
Eucalyptus grandis
Eucgr.F04276
N
0.734
Lus10042776.g
Linum usitatissimum
Lus10042776.g
N
0.732
VIT_04s0044g01370
Vitis vinifera
VIT_04s0044g01370
N
0.729
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.721
Bo5g034360
Brassica oleracea
Bo5g034360
N
0.710
mgf010500m
Mimulus guttatus
mgf010500m
N
0.707
Bra017915
Brassica rapa
Bra017915
N
0.705
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.705
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.702
SCL1
Arabidopsis lyrata
fgenesh2_kg.1__2335__AT1G21450.1
N
0.702