Carubv10008658m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10008658m.g T202347_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008658m GRAS 221 592

Links

Other GRAS family TFs
Other Capsella rubella TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.992
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.970
SCL1 Arabidopsis thaliana AT1G21450 N 0.968
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.962
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.935
Bra017915 Brassica rapa Bra017915 N 0.897
Bo5g034360 Brassica oleracea Bo5g034360 N 0.889
Bo7g059410 Brassica oleracea Bo7g059410 N 0.878
Bra012280 Brassica rapa Bra012280 N 0.841
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.778
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.778
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.769
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.762
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.759
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.757
TCM_035362 Theobroma cacao TCM_035362 N 0.754
29648.m001919 Ricinus communis 29648.m001919 N 0.751
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.749
Pm022704 Prunus mume Pm022704 N 0.743
MDP0000727836 Malus domestica MDP0000727836 N 0.741
PK29476.1 Cannabis sativa PK29476.1 N 0.738
MDP0000859087 Malus domestica MDP0000859087 N 0.738
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.738
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.732
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.730
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.727
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.724
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.724
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.724
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.724
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.724
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.724
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.722
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.716
Ca_03920 Cicer arietinum Ca_03920 N 0.714
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.714
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.705
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.703
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.700