CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TC007194
(
Tribolium castaneum
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
TC007194
T237668_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.835
0.835
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
0.829
0.829
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
0.829
0.829
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC007194-PA
Paired box
165
279
YGNAATAPGHPLASLVSQQRFLELSRFGLRHYDLAQHMLTQQGAVTKLLGTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILR
TC007194-PA
Homeodomain
377
433
RRNRTTFSPDQLEELEKEFEKSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Tribolium castaneum
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHUM427950
Pediculus humanus
PHUM427950
I
0.946
KGM_15291
Danaus plexippus
KGM_15291
I
0.946
HMEL010417
Heliconius melpomene
HMEL010417
I
0.945
NV12005
Nasonia vitripennis
NV12005
I
0.926
SINV20456
Solenopsis invicta
SINV20456
I
0.920
AGAP011417
Anopheles gambiae
AGAP011417
I
0.916
Hsal_03768--XP_394294.2_APIME
Harpegnathos saltator
Hsal_03768--XP_394294.2_APIME
I
0.905
AFAF005899
Anopheles farauti
AFAF005899
I
0.901
MCINX015151
Melitaea cinxia
MCINX015151
I
0.885
GF24980
Drosophila ananassae
FBgn0101972
I
0.883
GI12329
Drosophila mojavensis
FBgn0135086
I
0.878
GJ13266
Drosophila virilis
FBgn0200492
I
0.877
GL24956
Drosophila persimilis
FBgn0162543
I
0.877
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.877
MDOA006963
Musca domestica
MDOA006963
I
0.876
GI12327
Drosophila mojavensis
FBgn0135084
I
0.871
GJ13265
Drosophila virilis
FBgn0200491
I
0.871
LCUP004290
Lucilia cuprina
LCUP004290
I
0.871
GH16064
Drosophila grimshawi
FBgn0123535
I
0.871
GG13832
Drosophila erecta
FBgn0106095
I
0.870
GE20122
Drosophila yakuba
FBgn0237445
I
0.870
GD12719
Drosophila simulans
FBgn0184446
I
0.870
LCUP004289
Lucilia cuprina
LCUP004289
I
0.869
GE20121
Drosophila yakuba
FBgn0237444
I
0.867
GG13831
Drosophila erecta
FBgn0106094
I
0.867
GF24979
Drosophila ananassae
FBgn0101971
I
0.862
GK12629
Drosophila willistoni
FBgn0214638
I
0.855
toe
Drosophila melanogaster
FBgn0036285
D
0.849
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.847
AATE019032
Anopheles atroparvus
AATE019032
I
0.846
GH16065
Drosophila grimshawi
FBgn0123536
I
0.841
MDOA004637
Musca domestica
MDOA004637
I
0.835
GK12628
Drosophila willistoni
FBgn0214637
I
0.835
GM24656
Drosophila sechellia
FBgn0179519
I
0.835
eyg
Drosophila melanogaster
FBgn0000625
D
0.835
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.831
GD12721
Drosophila simulans
FBgn0184448
I
0.829
GM24657
Drosophila sechellia
FBgn0179520
I
0.829
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.821
tetur01g15740
Tetranychus urticae
tetur01g15740
I
0.820
AMAM022755
Anopheles maculatus
AMAM022755
I
0.819
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.771
GB55405
Apis mellifera
GB55405
I
0.735
ACEP19922
Atta cephalotes
ACEP19922
I
0.718
DAPPUDRAFT_253988
Daphnia pulex
DAPPUDRAFT_253988
I
0.712