VIT_18s0001g04810 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_18s0001g04810 T256814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL67
M10907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G77950_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0001g04810.t01 MADS box 10 57

Links

Other MADS box family TFs
Other Vitis vinifera TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla014721 Citrullus lanatus Cla014721 I 0.792
Aquca_014_00554 Aquilegia coerulea Aquca_014_00554 I 0.771
POPTR_0002s09290 Populus trichocarpa POPTR_0002s09290 I 0.771
OPUNC06G07570 Oryza punctata OPUNC06G07570 I 0.771
GSMUA_Achr3G04450_001 Musa acuminata GSMUA_Achr3G04450_001 I 0.771
SapurV1A.0010s0340 Salix purpurea SapurV1A.0010s0340 I 0.771
OGLUM06G08350 Oryza glumaepatula OGLUM06G08350 I 0.750
Sb10g007810 Sorghum bicolor Sb10g007810 I 0.750
Si008439m.g Setaria italica Si008439m.g I 0.750
OS06G0223300 Oryza sativa OS06G0223300 I 0.750
ORUFI06G08110 Oryza rufipogon ORUFI06G08110 I 0.750
OMERI06G09450 Oryza meridionalis OMERI06G09450 I 0.750
TCM_001182 Theobroma cacao TCM_001182 I 0.750
ORGLA06G0074200 Oryza glaberrima ORGLA06G0074200 I 0.750
OLONG_004474 Oryza longistaminata OLONG_004474 I 0.750
ONIVA06G09080 Oryza nivara ONIVA06G09080 I 0.750
VIT_07s0031g01140 Vitis vinifera VIT_07s0031g01140 I 0.750
gene31290-v1.0-hybrid Fragaria vesca gene31290-v1.0-hybrid I 0.750
Ciclev10003964m.g Citrus clementina Ciclev10003964m.g I 0.750
MDP0000243965 Malus domestica MDP0000243965 I 0.750
orange1.1g039560m.g Citrus sinensis orange1.1g039560m.g I 0.750
Pavir.Db01574 Panicum virgatum Pavir.Db01574 I 0.750
Carubv10010907m.g Capsella rubella Carubv10010907m.g I 0.750
Cagra.1707s0007 Capsella grandiflora Cagra.1707s0007 I 0.750
OBART06G07860 Oryza barthii OBART06G07860 I 0.750
Ca_24539 Cicer arietinum Ca_24539 I 0.750
Pm019181 Prunus mume Pm019181 I 0.750
29908.m005982 Ricinus communis 29908.m005982 I 0.750
TCM_034970 Theobroma cacao TCM_034970 I 0.750
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.750
GSMUA_Achr9G13010_001 Musa acuminata GSMUA_Achr9G13010_001 I 0.750
GRMZM2G334225 Zea mays GRMZM2G334225 I 0.750
BGIOSGA003731 Oryza indica BGIOSGA003731 I 0.750
OB08G26170 Oryza brachyantha OB08G26170 I 0.750
LPERR06G07270 Leersia perrieri LPERR06G07270 I 0.750
GRMZM2G152415 Zea mays GRMZM2G152415 I 0.750
AMTR_s00010p00214260 Amborella trichopoda AMTR_s00010p00214260 I 0.750
estExt_fgenesh1_kg.C_550007 Physcomitrella patens estExt_fgenesh1_kg.C_550007 I 0.729
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I 0.729
Bo8g071330 Brassica oleracea Bo8g071330 I 0.729
Bostr.20129s0232 Boechera stricta Bostr.20129s0232 I 0.729
cassava32041.m1 Manihot esculenta cassava32041.m1 I 0.729
Bo7g060150 Brassica oleracea Bo7g060150 I 0.729
Thhalv10019795m.g Eutrema salsugineum Thhalv10019795m.g I 0.729
cassava22012.m1 Manihot esculenta cassava22012.m1 I 0.729
cassava25616.m1 Manihot esculenta cassava25616.m1 I 0.729
Bra012308 Brassica rapa Bra012308 I 0.729
evm.TU.supercontig_21.133 Carica papaya evm.TU.supercontig_21.133 I 0.729
Gorai.009G216900 Gossypium raimondii Gorai.009G216900 I 0.729
AGL104 Arabidopsis thaliana AT1G22130 I 0.729
Lus10016810.g Linum usitatissimum Lus10016810.g I 0.729
Lus10022506.g Linum usitatissimum Lus10022506.g I 0.729
Gorai.005G100600 Gossypium raimondii Gorai.005G100600 I 0.729
Bra016386 Brassica rapa Bra016386 I 0.729
Lus10018714.g Linum usitatissimum Lus10018714.g I 0.729
SapurV1A.0293s0130 Salix purpurea SapurV1A.0293s0130 I 0.729
Gorai.005G093000 Gossypium raimondii Gorai.005G093000 I 0.729
BGIOSGA026745 Oryza indica BGIOSGA026745 I 0.729
30170.m013776 Ricinus communis 30170.m013776 I 0.729
ORUFI08G21330 Oryza rufipogon ORUFI08G21330 I 0.729
ORGLA08G0167200 Oryza glaberrima ORGLA08G0167200 I 0.729
AGL104 Arabidopsis lyrata Al_scaffold_0001_2320 I 0.729
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.729
OS08G0494100 Oryza sativa OS08G0494100 I 0.729
POPTR_0007s05980 Populus trichocarpa POPTR_0007s05980 I 0.729
OPUNC08G17110 Oryza punctata OPUNC08G17110 I 0.729
LPERR08G16000 Leersia perrieri LPERR08G16000 I 0.729
OB06G17440 Oryza brachyantha OB06G17440 I 0.729
OBART08G19110 Oryza barthii OBART08G19110 I 0.729
OGLUM08G20110 Oryza glumaepatula OGLUM08G20110 I 0.729
Pavir.J32837 Panicum virgatum Pavir.J32837 I 0.708
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.708
Pavir.Fb01739 Panicum virgatum Pavir.Fb01739 I 0.708
Gorai.007G242000 Gossypium raimondii Gorai.007G242000 I 0.708
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.708
AGL66 Arabidopsis thaliana AT1G77980 I 0.708
OMERI08G15140 Oryza meridionalis OMERI08G15140 I 0.708
ONIVA08G21050 Oryza nivara ONIVA08G21050 I 0.708
MTR_4g084740 Medicago truncatula MTR_4g084740 I 0.708
AGL67 Arabidopsis thaliana AT1G77950 D 0.708
Bo6g121640 Brassica oleracea Bo6g121640 I 0.708
fgenesh2_kg.2__2089__AT1G77950.1 Arabidopsis lyrata fgenesh2_kg.2__2089__AT1G77950.1 I 0.708
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.708
Si013985m.g Setaria italica Si013985m.g I 0.708
Traes_4DS_A28BC582A Triticum aestivum Traes_4DS_A28BC582A I 0.708
TRIUR3_20588 Triticum urartu TRIUR3_20588 I 0.708
BRADI3G39177 Brachypodium distachyon BRADI3G39177 I 0.708
F775_03584 Aegilops tauschii F775_03584 I 0.708
Bra015643 Brassica rapa Bra015643 I 0.708
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I 0.708
fgenesh2_kg.2__2429__AT1G77950.2 Arabidopsis lyrata fgenesh2_kg.2__2429__AT1G77950.2 I 0.708
Bostr.12659s0064 Boechera stricta Bostr.12659s0064 I 0.708
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.708
Ca_01572 Cicer arietinum Ca_01572 I 0.708
PRUPE_ppa020874mg Prunus persica PRUPE_ppa020874mg I 0.708
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.708
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I 0.708
GLYMA04G04641 Glycine max GLYMA04G04641 I 0.708
estExt_gwp_gw1.C_340302 Physcomitrella patens estExt_gwp_gw1.C_340302 I 0.708
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.708