GRMZM2G052606 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G052606 T271940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.757 0.860
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.757 0.860
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.756 0.828
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.756 0.828
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.756 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G052606_P01 Myb 23 70
GRMZM2G052606_P01 Myb 76 121

Links

Other Myb/SANT family TFs
Other Zea mays TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb08g016620 Sorghum bicolor Sb08g016620 I 0.909
MLOC_66577 Hordeum vulgare MLOC_66577 I 0.900
Traes_5BS_2CB91C54A Triticum aestivum Traes_5BS_2CB91C54A I 0.900
F775_06561 Aegilops tauschii F775_06561 I 0.900
TRIUR3_33254 Triticum urartu TRIUR3_33254 I 0.900
Traes_5DS_AACA2EBA3 Triticum aestivum Traes_5DS_AACA2EBA3 I 0.900
BRADI4G06317 Brachypodium distachyon BRADI4G06317 I 0.894
Pavir.Ca02370 Panicum virgatum Pavir.Ca02370 I 0.884
OGLUM12G15400 Oryza glumaepatula OGLUM12G15400 I 0.875
OMERI12G09660 Oryza meridionalis OMERI12G09660 I 0.875
ORGLA12G0120900 Oryza glaberrima ORGLA12G0120900 I 0.875
Si024786m.g Setaria italica Si024786m.g I 0.875
ORUFI12G15040 Oryza rufipogon ORUFI12G15040 I 0.875
OPUNC12G12380 Oryza punctata OPUNC12G12380 I 0.875
ONIVA05G29400 Oryza nivara ONIVA05G29400 I 0.875
OBART12G13720 Oryza barthii OBART12G13720 I 0.875
BGIOSGA036092 Oryza indica BGIOSGA036092 I 0.875
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.827
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.816
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.812
TCM_005885 Theobroma cacao TCM_005885 I 0.801
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.800
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I 0.800
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I 0.797
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.795
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.795
PK14287.1 Cannabis sativa PK14287.1 I 0.794
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.793
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.792
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.792
Bo3g008870 Brassica oleracea Bo3g008870 I 0.791
Bra006166 Brassica rapa Bra006166 I 0.791
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.790
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.790
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.790
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.790
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.787
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I 0.786
OB12G21380 Oryza brachyantha OB12G21380 I 0.782
mgf024753m Mimulus guttatus mgf024753m I 0.782
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.781
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.781
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I 0.781
Bo3g061630 Brassica oleracea Bo3g061630 I 0.775
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.773
MYB83 Vitis vinifera VIT_13s0064g00960 I 0.772
MTR_3g028740 Medicago truncatula MTR_3g028740 I 0.772
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I 0.769
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I 0.769
Pm016295 Prunus mume Pm016295 I 0.769
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.769
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I 0.767
GLYMA19G05080 Glycine max GLYMA19G05080 I 0.766
Bo2g010970 Brassica oleracea Bo2g010970 I 0.766
MDP0000736994 Malus domestica MDP0000736994 I 0.766
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I 0.766
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I 0.766
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I 0.766
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.763
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.762
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.762
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I 0.762
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.762
MDP0000722954 Malus domestica MDP0000722954 I 0.762
MDP0000204495 Malus domestica MDP0000204495 I 0.762
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.762
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.762
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.759
Bra001284 Brassica rapa Bra001284 I 0.759
Cla017541 Citrullus lanatus Cla017541 I 0.759
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.758
MYB46 Arabidopsis thaliana AT5G12870 D 0.757
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I 0.757
Carubv10001573m.g Capsella rubella Carubv10001573m.g I 0.757
Bra008875 Brassica rapa Bra008875 I 0.757
Bo9g169270 Brassica oleracea Bo9g169270 I 0.757
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I 0.757
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I 0.757
MTR_2g097910 Medicago truncatula MTR_2g097910 I 0.756
Bo5g139830 Brassica oleracea Bo5g139830 I 0.756
Bra029696 Brassica rapa Bra029696 I 0.756
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.756
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.756
MYB83 Arabidopsis thaliana AT3G08500 D 0.756
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.756
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.756
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I 0.753
Cla008683 Citrullus lanatus Cla008683 I 0.752
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.752
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.752
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.752
PK13930.1 Cannabis sativa PK13930.1 I 0.751
TCM_040694 Theobroma cacao TCM_040694 I 0.747
Lus10027369.g Linum usitatissimum Lus10027369.g I 0.746
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.746
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.744
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I 0.744
GLYMA13G41470 Glycine max GLYMA13G41470 I 0.740
GLYMA15G03920 Glycine max GLYMA15G03920 I 0.740
Lus10002559.g Linum usitatissimum Lus10002559.g I 0.739
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.737
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.737
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.737
gene14666-v1.0-hybrid Fragaria vesca gene14666-v1.0-hybrid I 0.735
Lus10031850.g Linum usitatissimum Lus10031850.g I 0.730
Lus10029520.g Linum usitatissimum Lus10029520.g I 0.725
Lus10039610.g Linum usitatissimum Lus10039610.g I 0.725
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I 0.722
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I 0.722
Cucsa.127860 Cucumis sativus Cucsa.127860 I 0.718
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.716
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.716
Pm012272 Prunus mume Pm012272 I 0.712
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I 0.703
cassava24925.valid.m1 Manihot esculenta cassava24925.valid.m1 I 0.699
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.696
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.693
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.689
OB07G24240 Oryza brachyantha OB07G24240 I 0.686
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.683
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.683
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.683
Bo2g156300 Brassica oleracea Bo2g156300 I 0.683
Bo7g095130 Brassica oleracea Bo7g095130 I 0.683
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.683
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.683
Ca_07460 Cicer arietinum Ca_07460 I 0.683
Bra036588 Brassica rapa Bra036588 I 0.683
MYB86 Arabidopsis thaliana AT5G26660 I 0.683
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.683
Bo9g010860 Brassica oleracea Bo9g010860 I 0.683
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.680
mgf019381m Mimulus guttatus mgf019381m I 0.678
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.678
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.676
evm.TU.supercontig_6.280 Carica papaya evm.TU.supercontig_6.280 I 0.676
Ciclev10021268m.g Citrus clementina Ciclev10021268m.g I 0.675
orange1.1g021486m.g Citrus sinensis orange1.1g021486m.g I 0.675
Bo5g009920 Brassica oleracea Bo5g009920 I 0.672
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.671
Si022730m.g Setaria italica Si022730m.g I 0.670
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.670
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.670
OB05G32030 Oryza brachyantha OB05G32030 I 0.670
GRMZM2G175232 Zea mays GRMZM2G175232 I 0.670
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.670
F775_28951 Aegilops tauschii F775_28951 I 0.670
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.670
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.670
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.670
Bra003443 Brassica rapa Bra003443 I 0.669
Bra014446 Brassica rapa Bra014446 I 0.669
TRIUR3_27020 Triticum urartu TRIUR3_27020 I 0.668
F775_01821 Aegilops tauschii F775_01821 I 0.668
MLOC_6156 Hordeum vulgare MLOC_6156 I 0.668
TRAES3BF071400020CFD_g Triticum aestivum TRAES3BF071400020CFD_g I 0.668
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.667
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.667
cassava44907.m1 Manihot esculenta cassava44907.m1 I 0.667
Pavir.Ca01788 Panicum virgatum Pavir.Ca01788 I 0.667
Sb09g027200 Sorghum bicolor Sb09g027200 I 0.667
Pavir.J19191 Panicum virgatum Pavir.J19191 I 0.667
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.666
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.666
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.665
BRADI2G17982 Brachypodium distachyon BRADI2G17982 I 0.665
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.664
BGIOSGA001460 Oryza indica BGIOSGA001460 I 0.664
Bra020016 Brassica rapa Bra020016 I 0.664
Cucsa.340960 Cucumis sativus Cucsa.340960 I 0.664
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.664
Cla012793 Citrullus lanatus Cla012793 I 0.664
ORUFI01G21210 Oryza rufipogon ORUFI01G21210 I 0.664
Bra020526 Brassica rapa Bra020526 I 0.663
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.663
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.663
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.663
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.663
Bra007588 Brassica rapa Bra007588 I 0.661
Si030273m.g Setaria italica Si030273m.g I 0.661
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.661
OS05G0543600 Oryza sativa OS05G0543600 I 0.661
BGIOSGA020297 Oryza indica BGIOSGA020297 I 0.661
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.661
Bo8g095790 Brassica oleracea Bo8g095790 I 0.661
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.661
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.661
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.661
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.661
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.661
OBART07G18450 Oryza barthii OBART07G18450 I 0.661
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.661
OMERI05G21780 Oryza meridionalis OMERI05G21780 I 0.661
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.661
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.661
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.661
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.661
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.661
ORGLA05G0210500 Oryza glaberrima ORGLA05G0210500 I 0.661